RNA–Protein interactions for RNA: ENST00000488017.1

SMC4-220, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-220ENST00000488017 KBTBD4Q9NVX7 518 aa6.41□□□□□ -1.38
SMC4-220ENST00000488017 A0A1B0GTL3 188 aa6.4□□□□□ -1.38
SMC4-220ENST00000488017 A0A1W2PQJ5 194 aa6.4□□□□□ -1.38
SMC4-220ENST00000488017 MEIS3P2A8K0S8 358 aa6.4□□□□□ -1.38
SMC4-220ENST00000488017 SUPT5HO00267 1087 aaKnown RBP6.4□□□□□ -1.38
SMC4-220ENST00000488017 ITGB3P05106 788 aa6.4□□□□□ -1.38
SMC4-220ENST00000488017 NCAM1P13591 858 aa6.4□□□□□ -1.38
SMC4-220ENST00000488017 CORO7P57737 925 aa6.4□□□□□ -1.38
SMC4-220ENST00000488017 SLC6A18Q96N87 628 aa6.4□□□□□ -1.38
SMC4-220ENST00000488017 SLC12A9Q9BXP2 914 aa6.4□□□□□ -1.38
SMC4-220ENST00000488017 NOBOXO60393 691 aa6.39□□□□□ -1.39
SMC4-220ENST00000488017 GSTM1P09488 218 aa6.39□□□□□ -1.39
SMC4-220ENST00000488017 EIF4A3P38919 411 aaKnown RBP6.39□□□□□ -1.39
SMC4-220ENST00000488017 DLX2Q07687 328 aaPredicted RBP6.39□□□□□ -1.39
SMC4-220ENST00000488017 CWF19L1Q69YN2 538 aaKnown RBP6.39□□□□□ -1.39
SMC4-220ENST00000488017 BICRALQ6AI39 1079 aa6.39□□□□□ -1.39
SMC4-220ENST00000488017 C7orf61Q8IZ16 206 aa6.39□□□□□ -1.39
SMC4-220ENST00000488017 CARFQ8N187 725 aa6.39□□□□□ -1.39
SMC4-220ENST00000488017 ZNF526Q8TF50 670 aaPredicted RBP6.39□□□□□ -1.39
SMC4-220ENST00000488017 DSCC1Q9BVC3 393 aa6.39□□□□□ -1.39
SMC4-220ENST00000488017 MRIQ9BWK5 157 aa6.39□□□□□ -1.39
SMC4-220ENST00000488017 LNPKQ9C0E8 428 aa6.39□□□□□ -1.39
SMC4-220ENST00000488017 SLITRK6Q9H5Y7 841 aa6.39□□□□□ -1.39
SMC4-220ENST00000488017 MRS2Q9HD23 443 aa6.39□□□□□ -1.39
SMC4-220ENST00000488017 SMPD4Q9NXE4 827 aa6.39□□□□□ -1.39
SMC4-220ENST00000488017 VTI1BQ9UEU0 232 aa6.39□□□□□ -1.39
SMC4-220ENST00000488017 CNR2P34972 360 aa6.38□□□□□ -1.39
SMC4-220ENST00000488017 GJA9P57773 515 aa6.38□□□□□ -1.39
SMC4-220ENST00000488017 PRR5P85299 388 aa6.38□□□□□ -1.39
SMC4-220ENST00000488017 B3GNT8Q7Z7M8 397 aa6.38□□□□□ -1.39
SMC4-220ENST00000488017 NLGN2Q8NFZ4 835 aa6.38□□□□□ -1.39
SMC4-220ENST00000488017 DHRS1Q96LJ7 313 aa6.38□□□□□ -1.39
SMC4-220ENST00000488017 SCAND2PQ9GZW5 306 aaPredicted RBP6.38□□□□□ -1.39
SMC4-220ENST00000488017 HCFC2Q9Y5Z7 792 aa6.38□□□□□ -1.39
SMC4-220ENST00000488017 DUSP10Q9Y6W6 482 aa6.38□□□□□ -1.39
SMC4-220ENST00000488017 F8W031 263 aaPredicted RBP6.37□□□□□ -1.39
SMC4-220ENST00000488017 FGF10O15520 208 aaPredicted RBP6.37□□□□□ -1.39
SMC4-220ENST00000488017 CLCQ05315 142 aa6.37□□□□□ -1.39
SMC4-220ENST00000488017 TTC9BQ8N6N2 239 aa6.37□□□□□ -1.39
SMC4-220ENST00000488017 RBM15Q96T37 977 aaKnown RBP eCLIP6.37□□□□□ -1.39
SMC4-220ENST00000488017 SUCOQ9UBS9 1254 aaKnown RBP6.37□□□□□ -1.39
SMC4-220ENST00000488017 DBR1Q9UK59 544 aaKnown RBP6.37□□□□□ -1.39
SMC4-220ENST00000488017 ASGR2P07307 311 aa6.36□□□□□ -1.39
SMC4-220ENST00000488017 NOP2P46087 812 aaKnown RBP6.36□□□□□ -1.39
SMC4-220ENST00000488017 CRKP46108 304 aa6.36□□□□□ -1.39
SMC4-220ENST00000488017 ZNF165P49910 485 aa6.36□□□□□ -1.39
SMC4-220ENST00000488017 CPZQ66K79 652 aa6.36□□□□□ -1.39
SMC4-220ENST00000488017 GK5Q6ZS86 529 aa6.36□□□□□ -1.39
SMC4-220ENST00000488017 ERICH6Q7L0X2 663 aa6.36□□□□□ -1.39
SMC4-220ENST00000488017 FBXO33Q7Z6M2 555 aa6.36□□□□□ -1.39
SMC4-220ENST00000488017 ZNF296Q8WUU4 475 aaPredicted RBP6.36□□□□□ -1.39
SMC4-220ENST00000488017 C1QTNF3Q9BXJ4 246 aa6.36□□□□□ -1.39
SMC4-220ENST00000488017 COPRSQ9NQ92 184 aa6.36□□□□□ -1.39
SMC4-220ENST00000488017 PLA2G2DQ9UNK4 145 aa6.36□□□□□ -1.39
SMC4-220ENST00000488017 SHOXO15266 292 aa6.35□□□□□ -1.39
SMC4-220ENST00000488017 SLPIP03973 132 aa6.35□□□□□ -1.39
SMC4-220ENST00000488017 SEZ6Q53EL9 994 aa6.35□□□□□ -1.39
SMC4-220ENST00000488017 ANKRD39Q53RE8 183 aa6.35□□□□□ -1.39
SMC4-220ENST00000488017 INTS3Q68E01 1043 aaKnown RBP6.35□□□□□ -1.39
SMC4-220ENST00000488017 SND1Q7KZF4 910 aaKnown RBP eCLIP6.35□□□□□ -1.39
SMC4-220ENST00000488017 RGS22Q8NE09 1264 aa6.35□□□□□ -1.39
SMC4-220ENST00000488017 DDX1Q92499 740 aaKnown RBP6.35□□□□□ -1.39
SMC4-220ENST00000488017 ALG3Q92685 438 aa6.35□□□□□ -1.39
SMC4-220ENST00000488017 SMARCC1Q92922 1105 aaPredicted RBP6.35□□□□□ -1.39
SMC4-220ENST00000488017 SAMD11Q96NU1 681 aa6.35□□□□□ -1.39
SMC4-220ENST00000488017 SLC9A7Q96T83 725 aa6.35□□□□□ -1.39
SMC4-220ENST00000488017 KRTAP3-1Q9BYR8 98 aa6.35□□□□□ -1.39
SMC4-220ENST00000488017 GDF5P43026 501 aa6.34□□□□□ -1.39
SMC4-220ENST00000488017 SARSP49591 514 aaKnown RBP6.34□□□□□ -1.39
SMC4-220ENST00000488017 CCDC144CPQ8IYA2 1237 aa6.34□□□□□ -1.39
SMC4-220ENST00000488017 TSPAN17Q96FV3 270 aa6.34□□□□□ -1.39
SMC4-220ENST00000488017 NTMQ9P121 344 aa6.34□□□□□ -1.39
SMC4-220ENST00000488017 H0Y8X5 98 aa6.33□□□□□ -1.4
SMC4-220ENST00000488017 CYR61O00622 381 aa6.33□□□□□ -1.4
SMC4-220ENST00000488017 TBC1D8O95759 1140 aa6.33□□□□□ -1.4
SMC4-220ENST00000488017 GLI4P10075 376 aa6.33□□□□□ -1.4
SMC4-220ENST00000488017 C6P13671 934 aa6.33□□□□□ -1.4
SMC4-220ENST00000488017 L1CAMP32004 1257 aa6.33□□□□□ -1.4
SMC4-220ENST00000488017 MC3RP41968 323 aa6.33□□□□□ -1.4
SMC4-220ENST00000488017 DNAJC14Q6Y2X3 702 aaPredicted RBP6.33□□□□□ -1.4
SMC4-220ENST00000488017 CPA5Q8WXQ8 436 aa6.33□□□□□ -1.4
SMC4-220ENST00000488017 PTCHD1Q96NR3 888 aa6.33□□□□□ -1.4
SMC4-220ENST00000488017 TRAIPQ9BWF2 469 aa6.33□□□□□ -1.4
SMC4-220ENST00000488017 C9IYK1 514 aa6.32□□□□□ -1.4
SMC4-220ENST00000488017 TACR1P25103 407 aa6.32□□□□□ -1.4
SMC4-220ENST00000488017 MCM4P33991 863 aa6.32□□□□□ -1.4
SMC4-220ENST00000488017 PMS1P54277 932 aaKnown RBP6.32□□□□□ -1.4
SMC4-220ENST00000488017 APOBRQ0VD83 1088 aa6.32□□□□□ -1.4
SMC4-220ENST00000488017 TRIM26Q12899 539 aaPredicted RBP6.32□□□□□ -1.4
SMC4-220ENST00000488017 SLC9A5Q14940 896 aa6.32□□□□□ -1.4
SMC4-220ENST00000488017 TTLL7Q6ZT98 887 aa6.32□□□□□ -1.4
SMC4-220ENST00000488017 ZNF761Q86XN6 746 aaPredicted RBP6.32□□□□□ -1.4
SMC4-220ENST00000488017 UBP1Q9NZI7 540 aa6.32□□□□□ -1.4
SMC4-220ENST00000488017 FHOD1Q9Y613 1164 aa6.32□□□□□ -1.4
SMC4-220ENST00000488017 PLATP00750 562 aa6.31□□□□□ -1.4
SMC4-220ENST00000488017 ZNF20P17024 532 aa6.31□□□□□ -1.4
SMC4-220ENST00000488017 TACR2P21452 398 aa6.31□□□□□ -1.4
SMC4-220ENST00000488017 PMLP29590 882 aa6.31□□□□□ -1.4
SMC4-220ENST00000488017 CRB2Q5IJ48 1285 aa6.31□□□□□ -1.4
SMC4-220ENST00000488017 NOL9Q5SY16 702 aaKnown RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms