RNA–Protein interactions for RNA: ENST00000488016.1

NECTIN3-209, Transcript of nectin cell adhesion molecule 3, humanhuman

TSL 3

Gene NECTIN3, Length 829 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-209ENST00000488016 GSG1L2A8MUP6 293 aa9.33□□□□□ -0.92
NECTIN3-209ENST00000488016 USP17L12C9JPN9 530 aa9.33□□□□□ -0.92
NECTIN3-209ENST00000488016 USP17L21D6R901 530 aa9.33□□□□□ -0.92
NECTIN3-209ENST00000488016 ZBTB48P10074 688 aaPredicted RBP9.33□□□□□ -0.92
NECTIN3-209ENST00000488016 PTPRAP18433 802 aa9.33□□□□□ -0.92
NECTIN3-209ENST00000488016 SHMT1P34896 483 aa9.33□□□□□ -0.92
NECTIN3-209ENST00000488016 PHKA2P46019 1235 aa9.33□□□□□ -0.92
NECTIN3-209ENST00000488016 SRSF11Q05519 484 aaKnown RBP9.33□□□□□ -0.92
NECTIN3-209ENST00000488016 MOGSQ13724 837 aa9.33□□□□□ -0.92
NECTIN3-209ENST00000488016 TLR1Q15399 786 aa9.33□□□□□ -0.92
NECTIN3-209ENST00000488016 NOL9Q5SY16 702 aaKnown RBP9.33□□□□□ -0.92
NECTIN3-209ENST00000488016 ZNF385CQ66K41 422 aaPredicted RBP9.33□□□□□ -0.92
NECTIN3-209ENST00000488016 ERO1BQ86YB8 467 aa9.33□□□□□ -0.92
NECTIN3-209ENST00000488016 EVI5LQ96CN4 794 aa9.33□□□□□ -0.92
NECTIN3-209ENST00000488016 HOOK2Q96ED9 719 aa9.33□□□□□ -0.92
NECTIN3-209ENST00000488016 NUCKS1Q9H1E3 243 aaKnown RBP9.33□□□□□ -0.92
NECTIN3-209ENST00000488016 PI4KBQ9UBF8 816 aa9.33□□□□□ -0.92
NECTIN3-209ENST00000488016 ZHX2Q9Y6X8 837 aa9.33□□□□□ -0.92
NECTIN3-209ENST00000488016 LAMB1P07942 1786 aa9.32□□□□□ -0.92
NECTIN3-209ENST00000488016 A0A1B0GTH6 734 aa9.32□□□□□ -0.92
NECTIN3-209ENST00000488016 BTBD19C9JJ37 291 aa9.32□□□□□ -0.92
NECTIN3-209ENST00000488016 GPR25O00155 361 aa9.32□□□□□ -0.92
NECTIN3-209ENST00000488016 GH2P01242 217 aa9.32□□□□□ -0.92
NECTIN3-209ENST00000488016 HLA-DOAP06340 250 aa9.32□□□□□ -0.92
NECTIN3-209ENST00000488016 TM4SF4P48230 202 aa9.32□□□□□ -0.92
NECTIN3-209ENST00000488016 CAP1Q01518 475 aa9.32□□□□□ -0.92
NECTIN3-209ENST00000488016 PPIL2Q13356 520 aa9.32□□□□□ -0.92
NECTIN3-209ENST00000488016 GAS6Q14393 721 aa9.32□□□□□ -0.92
NECTIN3-209ENST00000488016 HABP4Q5JVS0 413 aaKnown RBP9.32□□□□□ -0.92
NECTIN3-209ENST00000488016 TTC22Q5TAA0 569 aa9.32□□□□□ -0.92
NECTIN3-209ENST00000488016 CTR9Q6PD62 1173 aa9.32□□□□□ -0.92
NECTIN3-209ENST00000488016 METTL16Q86W50 562 aaKnown RBP9.32□□□□□ -0.92
NECTIN3-209ENST00000488016 DHX36Q9H2U1 1008 aaKnown RBP9.32□□□□□ -0.92
NECTIN3-209ENST00000488016 ETNK1Q9HBU6 452 aa9.32□□□□□ -0.92
NECTIN3-209ENST00000488016 GPAMQ9HCL2 828 aa9.32□□□□□ -0.92
NECTIN3-209ENST00000488016 PICK1Q9NRD5 415 aa9.32□□□□□ -0.92
NECTIN3-209ENST00000488016 TACC3Q9Y6A5 838 aa9.32□□□□□ -0.92
NECTIN3-209ENST00000488016 ZSWIM8A7E2V4 1837 aa9.32□□□□□ -0.92
NECTIN3-209ENST00000488016 PTPRFP10586 1907 aa9.31□□□□□ -0.92
NECTIN3-209ENST00000488016 MANSC4A6NHS7 340 aaPredicted RBP9.31□□□□□ -0.92
NECTIN3-209ENST00000488016 MINDY4BA8MYZ0 360 aa9.31□□□□□ -0.92
NECTIN3-209ENST00000488016 CA12O43570 354 aa9.31□□□□□ -0.92
NECTIN3-209ENST00000488016 CTNND1O60716 968 aaKnown RBP9.31□□□□□ -0.92
NECTIN3-209ENST00000488016 IGSF3O75054 1194 aa9.31□□□□□ -0.92
NECTIN3-209ENST00000488016 PRDM1O75626 825 aa9.31□□□□□ -0.92
NECTIN3-209ENST00000488016 APPP05067 770 aa9.31□□□□□ -0.92
NECTIN3-209ENST00000488016 ZFYP08048 801 aaPredicted RBP9.31□□□□□ -0.92
NECTIN3-209ENST00000488016 AKR1B1P15121 316 aa9.31□□□□□ -0.92
NECTIN3-209ENST00000488016 SDSP20132 328 aa9.31□□□□□ -0.92
NECTIN3-209ENST00000488016 CAP2P40123 477 aa9.31□□□□□ -0.92
NECTIN3-209ENST00000488016 PPATQ06203 517 aa9.31□□□□□ -0.92
NECTIN3-209ENST00000488016 GABPAQ06546 454 aa9.31□□□□□ -0.92
NECTIN3-209ENST00000488016 SREBF2Q12772 1141 aa9.31□□□□□ -0.92
NECTIN3-209ENST00000488016 CRHR2Q13324 411 aa9.31□□□□□ -0.92
NECTIN3-209ENST00000488016 C12orf60Q5U649 245 aa9.31□□□□□ -0.92
NECTIN3-209ENST00000488016 GADL1Q6ZQY3 521 aa9.31□□□□□ -0.92
NECTIN3-209ENST00000488016 POM121Q96HA1 1249 aa9.31□□□□□ -0.92
NECTIN3-209ENST00000488016 INCENPQ9NQS7 918 aa9.31□□□□□ -0.92
NECTIN3-209ENST00000488016 HERC5Q9UII4 1024 aaKnown RBP9.31□□□□□ -0.92
NECTIN3-209ENST00000488016 SERPINB13Q9UIV8 391 aa9.31□□□□□ -0.92
NECTIN3-209ENST00000488016 ZBTB21Q9ULJ3 1066 aa9.31□□□□□ -0.92
NECTIN3-209ENST00000488016 KCNH4Q9UQ05 1017 aa9.31□□□□□ -0.92
NECTIN3-209ENST00000488016 AFG3L2Q9Y4W6 797 aa9.31□□□□□ -0.92
NECTIN3-209ENST00000488016 HTTP42858 3142 aa9.3□□□□□ -0.92
NECTIN3-209ENST00000488016 UNCXA6NJT0 531 aa9.3□□□□□ -0.92
NECTIN3-209ENST00000488016 MPHOSPH10O00566 681 aaKnown RBP9.3□□□□□ -0.92
NECTIN3-209ENST00000488016 PEX10O60683 326 aa9.3□□□□□ -0.92
NECTIN3-209ENST00000488016 STAU1O95793 577 aaKnown RBP9.3□□□□□ -0.92
NECTIN3-209ENST00000488016 GUCY1A2P33402 732 aa9.3□□□□□ -0.92
NECTIN3-209ENST00000488016 TDO2P48775 406 aa9.3□□□□□ -0.92
NECTIN3-209ENST00000488016 GTF2A2P52657 109 aa9.3□□□□□ -0.92
NECTIN3-209ENST00000488016 GDF10P55107 478 aa9.3□□□□□ -0.92
NECTIN3-209ENST00000488016 SPP2Q13103 211 aa9.3□□□□□ -0.92
NECTIN3-209ENST00000488016 SNAPC2Q13487 334 aa9.3□□□□□ -0.92
NECTIN3-209ENST00000488016 SEPT2Q15019 361 aa9.3□□□□□ -0.92
NECTIN3-209ENST00000488016 RAB3GAP1Q15042 981 aa9.3□□□□□ -0.92
NECTIN3-209ENST00000488016 ZYXQ15942 572 aaKnown RBP9.3□□□□□ -0.92
NECTIN3-209ENST00000488016 C4orf17Q53FE4 359 aa9.3□□□□□ -0.92
NECTIN3-209ENST00000488016 TREML2Q5T2D2 321 aa9.3□□□□□ -0.92
NECTIN3-209ENST00000488016 GPAT2Q6NUI2 795 aa9.3□□□□□ -0.92
NECTIN3-209ENST00000488016 TATDN1Q6P1N9 297 aa9.3□□□□□ -0.92
NECTIN3-209ENST00000488016 CWC27Q6UX04 472 aaKnown RBP9.3□□□□□ -0.92
NECTIN3-209ENST00000488016 TTC6Q86TZ1 520 aa9.3□□□□□ -0.92
NECTIN3-209ENST00000488016 CERS3Q8IU89 383 aa9.3□□□□□ -0.92
NECTIN3-209ENST00000488016 FOXP4Q8IVH2 680 aaPredicted RBP9.3□□□□□ -0.92
NECTIN3-209ENST00000488016 IFNL3Q8IZI9 196 aa9.3□□□□□ -0.92
NECTIN3-209ENST00000488016 PGBD3Q8N328 593 aa9.3□□□□□ -0.92
NECTIN3-209ENST00000488016 ACER1Q8TDN7 264 aa9.3□□□□□ -0.92
NECTIN3-209ENST00000488016 RHBDD1Q8TEB9 315 aa9.3□□□□□ -0.92
NECTIN3-209ENST00000488016 CCDC136Q96JN2 1154 aa9.3□□□□□ -0.92
NECTIN3-209ENST00000488016 EHD4Q9H223 541 aa9.3□□□□□ -0.92
NECTIN3-209ENST00000488016 ATP8A2Q9NTI2 1148 aa9.3□□□□□ -0.92
NECTIN3-209ENST00000488016 CENPFP49454 3210 aa9.29□□□□□ -0.92
NECTIN3-209ENST00000488016 MYH8P13535 1937 aa9.29□□□□□ -0.92
NECTIN3-209ENST00000488016 A0A0G2JLL6 359 aaPredicted RBP9.29□□□□□ -0.92
NECTIN3-209ENST00000488016 PATL2C9JE40 543 aaKnown RBP9.29□□□□□ -0.92
NECTIN3-209ENST00000488016 RNF225M0QZC1 329 aaPredicted RBP9.29□□□□□ -0.92
NECTIN3-209ENST00000488016 INHAP05111 366 aa9.29□□□□□ -0.92
NECTIN3-209ENST00000488016 CYP2C8P10632 490 aa9.29□□□□□ -0.92
NECTIN3-209ENST00000488016 SKIP12755 728 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms