RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-215ENST00000487401 UPF3AQ9H1J1 476 aaKnown RBP14.63□□□□□ -0.07
SREBF1-215ENST00000487401 CTNNA3Q9UI47 895 aa14.63□□□□□ -0.07
SREBF1-215ENST00000487401 ELP1O95163 1332 aa14.63□□□□□ -0.07
SREBF1-215ENST00000487401 MYADML2A6NDP7 307 aa14.62□□□□□ -0.07
SREBF1-215ENST00000487401 ASGR1P07306 291 aa14.62□□□□□ -0.07
SREBF1-215ENST00000487401 BAATQ14032 418 aaPredicted RBP14.62□□□□□ -0.07
SREBF1-215ENST00000487401 CCSAPQ6IQ19 270 aaPredicted RBP14.62□□□□□ -0.07
SREBF1-215ENST00000487401 Q7L0L9 218 aa14.62□□□□□ -0.07
SREBF1-215ENST00000487401 ANKRD33Q7Z3H0 272 aa14.62□□□□□ -0.07
SREBF1-215ENST00000487401 IQCA1Q86XH1 822 aa14.62□□□□□ -0.07
SREBF1-215ENST00000487401 DGKHQ86XP1 1220 aa14.62□□□□□ -0.07
SREBF1-215ENST00000487401 ZKSCAN3Q9BRR0 538 aa14.62□□□□□ -0.07
SREBF1-215ENST00000487401 KATNBL1Q9H079 304 aa14.62□□□□□ -0.07
SREBF1-215ENST00000487401 ADD3Q9UEY8 706 aaKnown RBP14.62□□□□□ -0.07
SREBF1-215ENST00000487401 MYH7P12883 1935 aa14.62□□□□□ -0.07
SREBF1-215ENST00000487401 GREB1LQ9C091 1923 aaPredicted RBP14.61□□□□□ -0.07
SREBF1-215ENST00000487401 PTPDC1A2A3K4 754 aa14.61□□□□□ -0.07
SREBF1-215ENST00000487401 KIAA0355O15063 1070 aa14.61□□□□□ -0.07
SREBF1-215ENST00000487401 ADCY6O43306 1168 aa14.61□□□□□ -0.07
SREBF1-215ENST00000487401 ZEB2O60315 1214 aa14.61□□□□□ -0.07
SREBF1-215ENST00000487401 IRX5P78411 483 aaPredicted RBP14.61□□□□□ -0.07
SREBF1-215ENST00000487401 ZNF543Q08ER8 600 aa14.61□□□□□ -0.07
SREBF1-215ENST00000487401 SHHQ15465 462 aa14.61□□□□□ -0.07
SREBF1-215ENST00000487401 IMMTQ16891 758 aaKnown RBP14.61□□□□□ -0.07
SREBF1-215ENST00000487401 IQSEC1Q6DN90 963 aa14.61□□□□□ -0.07
SREBF1-215ENST00000487401 DSCC1Q9BVC3 393 aa14.61□□□□□ -0.07
SREBF1-215ENST00000487401 KAT14Q9H8E8 782 aa14.61□□□□□ -0.07
SREBF1-215ENST00000487401 NEDD4P46934 1319 aa14.61□□□□□ -0.07
SREBF1-215ENST00000487401 A0A0U1RQG5 324 aaPredicted RBP14.6□□□□□ -0.07
SREBF1-215ENST00000487401 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.6□□□□□ -0.07
SREBF1-215ENST00000487401 DYNC1LI2O43237 492 aaPredicted RBP14.6□□□□□ -0.07
SREBF1-215ENST00000487401 KDM4AO75164 1064 aa14.6□□□□□ -0.07
SREBF1-215ENST00000487401 BEX3Q00994 111 aa14.6□□□□□ -0.07
SREBF1-215ENST00000487401 FAAP100Q0VG06 881 aa14.6□□□□□ -0.07
SREBF1-215ENST00000487401 C9orf50Q5SZB4 431 aa14.6□□□□□ -0.07
SREBF1-215ENST00000487401 GPATCH4Q5T3I0 446 aaKnown RBP14.6□□□□□ -0.07
SREBF1-215ENST00000487401 EEPD1Q7L9B9 569 aa14.6□□□□□ -0.07
SREBF1-215ENST00000487401 FBXO16Q8IX29 292 aaPredicted RBP14.6□□□□□ -0.07
SREBF1-215ENST00000487401 VTA1Q9NP79 307 aa14.6□□□□□ -0.07
SREBF1-215ENST00000487401 MTMR10Q9NXD2 777 aa14.6□□□□□ -0.07
SREBF1-215ENST00000487401 LAMA3Q16787 3333 aa14.6□□□□□ -0.07
SREBF1-215ENST00000487401 MROH7Q68CQ1 1323 aa14.6□□□□□ -0.07
SREBF1-215ENST00000487401 B4E1Z4 1266 aa14.59□□□□□ -0.07
SREBF1-215ENST00000487401 ARVCFO00192 962 aa14.59□□□□□ -0.07
SREBF1-215ENST00000487401 NFIBO00712 420 aa14.59□□□□□ -0.07
SREBF1-215ENST00000487401 CABYRO75952 493 aa14.59□□□□□ -0.07
SREBF1-215ENST00000487401 GOLGA8HP0CJ92 632 aa14.59□□□□□ -0.07
SREBF1-215ENST00000487401 SNHG28P0DPA3 235 aa14.59□□□□□ -0.07
SREBF1-215ENST00000487401 SMPD1P17405 629 aa14.59□□□□□ -0.07
SREBF1-215ENST00000487401 ITGB8P26012 769 aa14.59□□□□□ -0.07
SREBF1-215ENST00000487401 CALML3P27482 149 aa14.59□□□□□ -0.07
SREBF1-215ENST00000487401 NKX3-2P78367 333 aa14.59□□□□□ -0.07
SREBF1-215ENST00000487401 FPGSQ05932 587 aa14.59□□□□□ -0.07
SREBF1-215ENST00000487401 FSCN1Q16658 493 aaKnown RBP14.59□□□□□ -0.07
SREBF1-215ENST00000487401 RNF207Q6ZRF8 634 aa14.59□□□□□ -0.07
SREBF1-215ENST00000487401 KIAA1211Q6ZU35 1233 aa14.59□□□□□ -0.07
SREBF1-215ENST00000487401 TLK2Q86UE8 772 aa14.59□□□□□ -0.07
SREBF1-215ENST00000487401 SLC17A8Q8NDX2 589 aa14.59□□□□□ -0.07
SREBF1-215ENST00000487401 PURBQ96QR8 312 aaKnown RBP14.59□□□□□ -0.07
SREBF1-215ENST00000487401 ZSCAN10Q96SZ4 725 aaPredicted RBP14.59□□□□□ -0.07
SREBF1-215ENST00000487401 MPHOSPH6Q99547 160 aaKnown RBP14.59□□□□□ -0.07
SREBF1-215ENST00000487401 KRT23Q9C075 422 aa14.59□□□□□ -0.07
SREBF1-215ENST00000487401 UBA5Q9GZZ9 404 aa14.59□□□□□ -0.07
SREBF1-215ENST00000487401 PDGFCQ9NRA1 345 aa14.59□□□□□ -0.07
SREBF1-215ENST00000487401 GNEQ9Y223 722 aaKnown RBP14.59□□□□□ -0.07
SREBF1-215ENST00000487401 DDX49Q9Y6V7 483 aaKnown RBP14.59□□□□□ -0.07
SREBF1-215ENST00000487401 DNAH12Q6ZR08 3092 aa14.59□□□□□ -0.07
SREBF1-215ENST00000487401 LOC102724159A0A0B4J2E5 919 aa14.58□□□□□ -0.08
SREBF1-215ENST00000487401 TLR3O15455 904 aaKnown RBP14.58□□□□□ -0.08
SREBF1-215ENST00000487401 TIMP1P01033 207 aa14.58□□□□□ -0.08
SREBF1-215ENST00000487401 CDK7P50613 346 aa14.58□□□□□ -0.08
SREBF1-215ENST00000487401 ALDH5A1P51649 535 aaPredicted RBP14.58□□□□□ -0.08
SREBF1-215ENST00000487401 PWP2Q15269 919 aaKnown RBP14.58□□□□□ -0.08
SREBF1-215ENST00000487401 FAM109BQ6ICB4 259 aaPredicted RBP14.58□□□□□ -0.08
SREBF1-215ENST00000487401 TAPT1Q6NXT6 567 aa14.58□□□□□ -0.08
SREBF1-215ENST00000487401 PNMA1Q8ND90 353 aa14.58□□□□□ -0.08
SREBF1-215ENST00000487401 MORC4Q8TE76 937 aa14.58□□□□□ -0.08
SREBF1-215ENST00000487401 CLEC4DQ8WXI8 215 aa14.58□□□□□ -0.08
SREBF1-215ENST00000487401 ANKS1AQ92625 1134 aa14.58□□□□□ -0.08
SREBF1-215ENST00000487401 UBAC1Q9BSL1 405 aa14.58□□□□□ -0.08
SREBF1-215ENST00000487401 CNNM2Q9H8M5 875 aa14.58□□□□□ -0.08
SREBF1-215ENST00000487401 Q9Y3F1 56 aa14.58□□□□□ -0.08
SREBF1-215ENST00000487401 ASTN1O14525 1302 aa14.58□□□□□ -0.08
SREBF1-215ENST00000487401 MYH8P13535 1937 aa14.58□□□□□ -0.08
SREBF1-215ENST00000487401 B4DLN1 442 aa14.57□□□□□ -0.08
SREBF1-215ENST00000487401 CTAGE5O15320 804 aa14.57□□□□□ -0.08
SREBF1-215ENST00000487401 MRPL12P52815 198 aaKnown RBP14.57□□□□□ -0.08
SREBF1-215ENST00000487401 PDE4DQ08499 809 aa14.57□□□□□ -0.08
SREBF1-215ENST00000487401 TTC22Q5TAA0 569 aa14.57□□□□□ -0.08
SREBF1-215ENST00000487401 CXCL17Q6UXB2 119 aa14.57□□□□□ -0.08
SREBF1-215ENST00000487401 RNPC3Q96LT9 517 aaKnown RBP14.57□□□□□ -0.08
SREBF1-215ENST00000487401 WDR11Q9BZH6 1224 aa14.57□□□□□ -0.08
SREBF1-215ENST00000487401 ZSWIM5Q9P217 1185 aa14.57□□□□□ -0.08
SREBF1-215ENST00000487401 STXBP5LQ9Y2K9 1186 aa14.57□□□□□ -0.08
SREBF1-215ENST00000487401 WDR19Q8NEZ3 1342 aa14.57□□□□□ -0.08
SREBF1-215ENST00000487401 ALPK3Q96L96 1907 aa14.56□□□□□ -0.08
SREBF1-215ENST00000487401 DHX16O60231 1041 aaKnown RBP14.56□□□□□ -0.08
SREBF1-215ENST00000487401 PDE4AP27815 886 aa14.56□□□□□ -0.08
SREBF1-215ENST00000487401 EPHB4P54760 987 aa14.56□□□□□ -0.08
SREBF1-215ENST00000487401 RPS6P62753 249 aaKnown RBP14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms