RNA–Protein interactions for RNA: ENST00000487384.5

HOXA9-204, Transcript of homeobox A9, humanhuman

TSL 3

Gene HOXA9, Length 693 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-204ENST00000487384 UBE3CQ15386 1083 aa10.03□□□□□ -0.8
HOXA9-204ENST00000487384 FSCN1Q16658 493 aaKnown RBP10.03□□□□□ -0.8
HOXA9-204ENST00000487384 TMEM63BQ5T3F8 832 aa10.03□□□□□ -0.8
HOXA9-204ENST00000487384 EEPD1Q7L9B9 569 aa10.03□□□□□ -0.8
HOXA9-204ENST00000487384 TLK2Q86UE8 772 aa10.03□□□□□ -0.8
HOXA9-204ENST00000487384 LRRC47Q8N1G4 583 aaKnown RBP10.03□□□□□ -0.8
HOXA9-204ENST00000487384 HAUS7Q99871 368 aa10.03□□□□□ -0.8
HOXA9-204ENST00000487384 NOC4LQ9BVI4 516 aaKnown RBP10.03□□□□□ -0.8
HOXA9-204ENST00000487384 WNT8AQ9H1J5 351 aa10.03□□□□□ -0.8
HOXA9-204ENST00000487384 NYAP2Q9P242 653 aa10.03□□□□□ -0.8
HOXA9-204ENST00000487384 ARPP21Q9UBL0 812 aaPredicted RBP10.03□□□□□ -0.8
HOXA9-204ENST00000487384 WDFY4Q6ZS81 3184 aa10.03□□□□□ -0.8
HOXA9-204ENST00000487384 ATP2A2P16615 1042 aaKnown RBP10.02□□□□□ -0.81
HOXA9-204ENST00000487384 ATP5JP18859 108 aa10.02□□□□□ -0.81
HOXA9-204ENST00000487384 KRT40Q6A162 431 aa10.02□□□□□ -0.81
HOXA9-204ENST00000487384 DEFB128Q7Z7B8 93 aa10.02□□□□□ -0.81
HOXA9-204ENST00000487384 SIRT2Q8IXJ6 389 aa10.02□□□□□ -0.81
HOXA9-204ENST00000487384 FAM133AQ8N9E0 248 aa10.02□□□□□ -0.81
HOXA9-204ENST00000487384 SLC43A3Q8NBI5 491 aa10.02□□□□□ -0.81
HOXA9-204ENST00000487384 CHST13Q8NET6 341 aa10.02□□□□□ -0.81
HOXA9-204ENST00000487384 CEP95Q96GE4 821 aa10.02□□□□□ -0.81
HOXA9-204ENST00000487384 AP5M1Q9H0R1 490 aa10.02□□□□□ -0.81
HOXA9-204ENST00000487384 PDGFCQ9NRA1 345 aa10.02□□□□□ -0.81
HOXA9-204ENST00000487384 FBXO40Q9UH90 709 aa10.02□□□□□ -0.81
HOXA9-204ENST00000487384 FEM1BQ9UK73 627 aa10.02□□□□□ -0.81
HOXA9-204ENST00000487384 GNEQ9Y223 722 aaKnown RBP10.02□□□□□ -0.81
HOXA9-204ENST00000487384 COG6Q9Y2V7 657 aa10.02□□□□□ -0.81
HOXA9-204ENST00000487384 PTPRSQ13332 1948 aa10.01□□□□□ -0.81
HOXA9-204ENST00000487384 PIEZO1Q92508 2521 aa10.01□□□□□ -0.81
HOXA9-204ENST00000487384 SOWAHBA6NEL2 793 aa10.01□□□□□ -0.81
HOXA9-204ENST00000487384 GSG1L2A8MUP6 293 aa10.01□□□□□ -0.81
HOXA9-204ENST00000487384 TMEM232C9JQI7 657 aa10.01□□□□□ -0.81
HOXA9-204ENST00000487384 CCER2I3L3R5 266 aa10.01□□□□□ -0.81
HOXA9-204ENST00000487384 CABYRO75952 493 aa10.01□□□□□ -0.81
HOXA9-204ENST00000487384 CA3P07451 260 aa10.01□□□□□ -0.81
HOXA9-204ENST00000487384 CYP2C9P11712 490 aa10.01□□□□□ -0.81
HOXA9-204ENST00000487384 SMPD1P17405 629 aa10.01□□□□□ -0.81
HOXA9-204ENST00000487384 SNAP25P60880 206 aa10.01□□□□□ -0.81
HOXA9-204ENST00000487384 IKQ13123 557 aaPredicted RBP10.01□□□□□ -0.81
HOXA9-204ENST00000487384 TTLL4Q14679 1199 aa10.01□□□□□ -0.81
HOXA9-204ENST00000487384 ZSCAN25Q6NSZ9 544 aa10.01□□□□□ -0.81
HOXA9-204ENST00000487384 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.01□□□□□ -0.81
HOXA9-204ENST00000487384 FBXO16Q8IX29 292 aaPredicted RBP10.01□□□□□ -0.81
HOXA9-204ENST00000487384 RPUSD2Q8IZ73 545 aaKnown RBP10.01□□□□□ -0.81
HOXA9-204ENST00000487384 VWCEQ96DN2 955 aa10.01□□□□□ -0.81
HOXA9-204ENST00000487384 AGBL1Q96MI9 1066 aa10.01□□□□□ -0.81
HOXA9-204ENST00000487384 STRBPQ96SI9 672 aaKnown RBP10.01□□□□□ -0.81
HOXA9-204ENST00000487384 C1QTNF1Q9BXJ1 281 aa10.01□□□□□ -0.81
HOXA9-204ENST00000487384 EPHX3Q9H6B9 360 aa10.01□□□□□ -0.81
HOXA9-204ENST00000487384 ACAD9Q9H845 621 aa10.01□□□□□ -0.81
HOXA9-204ENST00000487384 A1CFQ9NQ94 594 aaKnown RBP10.01□□□□□ -0.81
HOXA9-204ENST00000487384 RNF146Q9NTX7 359 aa10.01□□□□□ -0.81
HOXA9-204ENST00000487384 TRMT13Q9NUP7 481 aaKnown RBP10.01□□□□□ -0.81
HOXA9-204ENST00000487384 PCDHA11Q9Y5I1 949 aa10.01□□□□□ -0.81
HOXA9-204ENST00000487384 IGKV6D-41A0A0C4DH26 115 aa10□□□□□ -0.81
HOXA9-204ENST00000487384 EPOPA6NHQ4 379 aa10□□□□□ -0.81
HOXA9-204ENST00000487384 ASB14A6NK59 587 aa10□□□□□ -0.81
HOXA9-204ENST00000487384 GTPBP6O43824 516 aaPredicted RBP10□□□□□ -0.81
HOXA9-204ENST00000487384 SMARCA5O60264 1052 aaPredicted RBP10□□□□□ -0.81
HOXA9-204ENST00000487384 ZEB2O60315 1214 aa10□□□□□ -0.81
HOXA9-204ENST00000487384 HMMRO75330 724 aa10□□□□□ -0.81
HOXA9-204ENST00000487384 BMP3P12645 472 aa10□□□□□ -0.81
HOXA9-204ENST00000487384 ALAS1P13196 640 aa10□□□□□ -0.81
HOXA9-204ENST00000487384 OAZ1P54368 228 aa10□□□□□ -0.81
HOXA9-204ENST00000487384 NKX3-2P78367 333 aa10□□□□□ -0.81
HOXA9-204ENST00000487384 AAK1Q2M2I8 961 aa10□□□□□ -0.81
HOXA9-204ENST00000487384 SBK1Q52WX2 424 aa10□□□□□ -0.81
HOXA9-204ENST00000487384 TMEM67Q5HYA8 995 aa10□□□□□ -0.81
HOXA9-204ENST00000487384 SLFN13Q68D06 897 aa10□□□□□ -0.81
HOXA9-204ENST00000487384 ZNF444Q8N0Y2 327 aaPredicted RBP10□□□□□ -0.81
HOXA9-204ENST00000487384 PPP1R13LQ8WUF5 828 aa10□□□□□ -0.81
HOXA9-204ENST00000487384 TRERF1Q96PN7 1200 aa10□□□□□ -0.81
HOXA9-204ENST00000487384 PURBQ96QR8 312 aaKnown RBP10□□□□□ -0.81
HOXA9-204ENST00000487384 EPB41L4AQ9HCS5 686 aaPredicted RBP10□□□□□ -0.81
HOXA9-204ENST00000487384 MTMR4Q9NYA4 1195 aa10□□□□□ -0.81
HOXA9-204ENST00000487384 MTCH2Q9Y6C9 303 aa10□□□□□ -0.81
HOXA9-204ENST00000487384 C5orf42Q9H799 3197 aa10□□□□□ -0.81
HOXA9-204ENST00000487384 TRIOO75962 3097 aa10□□□□□ -0.81
HOXA9-204ENST00000487384 TANC1Q9C0D5 1861 aa10□□□□□ -0.81
HOXA9-204ENST00000487384 COL4A4P53420 1690 aaPredicted RBP9.99□□□□□ -0.81
HOXA9-204ENST00000487384 SCN10AQ9Y5Y9 1956 aa9.99□□□□□ -0.81
HOXA9-204ENST00000487384 ERC2O15083 957 aa9.99□□□□□ -0.81
HOXA9-204ENST00000487384 RAB11FIP3O75154 756 aa9.99□□□□□ -0.81
HOXA9-204ENST00000487384 TTLL1O95922 423 aa9.99□□□□□ -0.81
HOXA9-204ENST00000487384 APPP05067 770 aa9.99□□□□□ -0.81
HOXA9-204ENST00000487384 TDO2P48775 406 aa9.99□□□□□ -0.81
HOXA9-204ENST00000487384 STAT2P52630 851 aa9.99□□□□□ -0.81
HOXA9-204ENST00000487384 MUM1L1Q5H9M0 696 aa9.99□□□□□ -0.81
HOXA9-204ENST00000487384 TAPT1Q6NXT6 567 aa9.99□□□□□ -0.81
HOXA9-204ENST00000487384 KIAA1211Q6ZU35 1233 aa9.99□□□□□ -0.81
HOXA9-204ENST00000487384 RPAP2Q8IXW5 612 aaPredicted RBP9.99□□□□□ -0.81
HOXA9-204ENST00000487384 ARNTL2Q8WYA1 636 aa9.99□□□□□ -0.81
HOXA9-204ENST00000487384 OSBP2Q969R2 916 aa9.99□□□□□ -0.81
HOXA9-204ENST00000487384 MKL1Q969V6 931 aa9.99□□□□□ -0.81
HOXA9-204ENST00000487384 LRFN3Q9BTN0 628 aa9.99□□□□□ -0.81
HOXA9-204ENST00000487384 ALDH8A1Q9H2A2 487 aaPredicted RBP9.99□□□□□ -0.81
HOXA9-204ENST00000487384 MTMR7Q9Y216 660 aa9.99□□□□□ -0.81
HOXA9-204ENST00000487384 ZNF536O15090 1300 aa9.99□□□□□ -0.81
HOXA9-204ENST00000487384 ARHGEF15O94989 841 aa9.98□□□□□ -0.81
HOXA9-204ENST00000487384 MYL3P08590 195 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms