RNA–Protein interactions for RNA: ENST00000486311.5

SREBF1-214, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 473 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-214ENST00000486311 ITGB8P26012 769 aa26.42■■□□□ 1.82
SREBF1-214ENST00000486311 IRX5P78411 483 aaPredicted RBP26.42■■□□□ 1.82
SREBF1-214ENST00000486311 C9orf50Q5SZB4 431 aa26.42■■□□□ 1.82
SREBF1-214ENST00000486311 FAM109BQ6ICB4 259 aaPredicted RBP26.42■■□□□ 1.82
SREBF1-214ENST00000486311 MFSD6Q6ZSS7 791 aa26.42■■□□□ 1.82
SREBF1-214ENST00000486311 TBC1D10CQ8IV04 446 aa26.42■■□□□ 1.82
SREBF1-214ENST00000486311 TTC14Q96N46 770 aa26.42■■□□□ 1.82
SREBF1-214ENST00000486311 ASGR1P07306 291 aa26.41■■□□□ 1.82
SREBF1-214ENST00000486311 SLC16A2P36021 539 aa26.41■■□□□ 1.82
SREBF1-214ENST00000486311 NKX3-2P78367 333 aa26.41■■□□□ 1.82
SREBF1-214ENST00000486311 SYDE2Q5VT97 1194 aa26.41■■□□□ 1.82
SREBF1-214ENST00000486311 GLT1D1Q96MS3 346 aa26.41■■□□□ 1.82
SREBF1-214ENST00000486311 RNF41Q9H4P4 317 aaPredicted RBP26.41■■□□□ 1.82
SREBF1-214ENST00000486311 STXBP5LQ9Y2K9 1186 aa26.41■■□□□ 1.82
SREBF1-214ENST00000486311 ASTN1O14525 1302 aa26.4■■□□□ 1.82
SREBF1-214ENST00000486311 DCDC2CA8MYV0 355 aa26.4■■□□□ 1.82
SREBF1-214ENST00000486311 FAAP100Q0VG06 881 aa26.4■■□□□ 1.82
SREBF1-214ENST00000486311 TMEM39AQ9NV64 488 aa26.4■■□□□ 1.82
SREBF1-214ENST00000486311 FRMPD2Q68DX3 1309 aaPredicted RBP26.39■■□□□ 1.82
SREBF1-214ENST00000486311 CTAGE5O15320 804 aa26.39■■□□□ 1.82
SREBF1-214ENST00000486311 PDHBP11177 359 aa26.39■■□□□ 1.82
SREBF1-214ENST00000486311 RAG1P15918 1043 aa26.39■■□□□ 1.82
SREBF1-214ENST00000486311 TNFAIP2Q03169 654 aa26.39■■□□□ 1.82
SREBF1-214ENST00000486311 GNASQ5JWF2 1037 aa26.39■■□□□ 1.82
SREBF1-214ENST00000486311 NSMFQ6X4W1 530 aa26.39■■□□□ 1.82
SREBF1-214ENST00000486311 GPCPD1Q9NPB8 672 aa26.39■■□□□ 1.82
SREBF1-214ENST00000486311 C11orf97A0A1B0GVM6 126 aaPredicted RBP26.38■■□□□ 1.81
SREBF1-214ENST00000486311 DLL1O00548 723 aa26.38■■□□□ 1.81
SREBF1-214ENST00000486311 NT5C2P49902 561 aa26.38■■□□□ 1.81
SREBF1-214ENST00000486311 CDK7P50613 346 aa26.38■■□□□ 1.81
SREBF1-214ENST00000486311 GNEQ9Y223 722 aaKnown RBP26.38■■□□□ 1.81
SREBF1-214ENST00000486311 ZNF213O14771 459 aa26.37■■□□□ 1.81
SREBF1-214ENST00000486311 SNHG28P0DPA3 235 aa26.37■■□□□ 1.81
SREBF1-214ENST00000486311 CWC27Q6UX04 472 aaKnown RBP26.37■■□□□ 1.81
SREBF1-214ENST00000486311 MORC4Q8TE76 937 aa26.37■■□□□ 1.81
SREBF1-214ENST00000486311 ESR2Q92731 530 aa26.37■■□□□ 1.81
SREBF1-214ENST00000486311 DIAPH3Q9NSV4 1193 aa26.37■■□□□ 1.81
SREBF1-214ENST00000486311 DDX49Q9Y6V7 483 aaKnown RBP26.37■■□□□ 1.81
SREBF1-214ENST00000486311 NEDD4P46934 1319 aa26.37■■□□□ 1.81
SREBF1-214ENST00000486311 MROH7Q68CQ1 1323 aa26.37■■□□□ 1.81
SREBF1-214ENST00000486311 A0A0U1RQG5 324 aaPredicted RBP26.36■■□□□ 1.81
SREBF1-214ENST00000486311 HIP1O00291 1037 aa26.36■■□□□ 1.81
SREBF1-214ENST00000486311 ZNF543Q08ER8 600 aa26.36■■□□□ 1.81
SREBF1-214ENST00000486311 NOL8Q76FK4 1167 aaKnown RBP26.36■■□□□ 1.81
SREBF1-214ENST00000486311 TBX21Q9UL17 535 aa26.36■■□□□ 1.81
SREBF1-214ENST00000486311 PNMA2Q9UL42 364 aa26.36■■□□□ 1.81
SREBF1-214ENST00000486311 ARVCFO00192 962 aa26.35■■□□□ 1.81
SREBF1-214ENST00000486311 EPHB4P54760 987 aa26.35■■□□□ 1.81
SREBF1-214ENST00000486311 BAATQ14032 418 aaPredicted RBP26.35■■□□□ 1.81
SREBF1-214ENST00000486311 TAPT1Q6NXT6 567 aa26.35■■□□□ 1.81
SREBF1-214ENST00000486311 DGKHQ86XP1 1220 aa26.35■■□□□ 1.81
SREBF1-214ENST00000486311 VTI1AQ96AJ9 217 aa26.35■■□□□ 1.81
SREBF1-214ENST00000486311 PURBQ96QR8 312 aaKnown RBP26.35■■□□□ 1.81
SREBF1-214ENST00000486311 NFIBO00712 420 aa26.34■■□□□ 1.81
SREBF1-214ENST00000486311 SMPD1P17405 629 aa26.34■■□□□ 1.81
SREBF1-214ENST00000486311 BEX3Q00994 111 aa26.34■■□□□ 1.81
SREBF1-214ENST00000486311 FPGSQ05932 587 aa26.34■■□□□ 1.81
SREBF1-214ENST00000486311 IQSEC1Q6DN90 963 aa26.34■■□□□ 1.81
SREBF1-214ENST00000486311 TLK2Q86UE8 772 aa26.34■■□□□ 1.81
SREBF1-214ENST00000486311 FBXO16Q8IX29 292 aaPredicted RBP26.34■■□□□ 1.81
SREBF1-214ENST00000486311 VTA1Q9NP79 307 aa26.34■■□□□ 1.81
SREBF1-214ENST00000486311 PDGFCQ9NRA1 345 aa26.34■■□□□ 1.81
SREBF1-214ENST00000486311 ADD3Q9UEY8 706 aaKnown RBP26.34■■□□□ 1.81
SREBF1-214ENST00000486311 LOC102724159A0A0B4J2E5 919 aa26.33■■□□□ 1.81
SREBF1-214ENST00000486311 TIMP1P01033 207 aa26.33■■□□□ 1.81
SREBF1-214ENST00000486311 SMAD3P84022 425 aaKnown RBP26.33■■□□□ 1.81
SREBF1-214ENST00000486311 PWP2Q15269 919 aaKnown RBP26.33■■□□□ 1.81
SREBF1-214ENST00000486311 CLEC4DQ8WXI8 215 aa26.33■■□□□ 1.81
SREBF1-214ENST00000486311 GUCD1Q96NT3 240 aa26.33■■□□□ 1.81
SREBF1-214ENST00000486311 DSCC1Q9BVC3 393 aa26.33■■□□□ 1.81
SREBF1-214ENST00000486311 AP5M1Q9H0R1 490 aa26.33■■□□□ 1.81
SREBF1-214ENST00000486311 Q9Y3F1 56 aa26.33■■□□□ 1.81
SREBF1-214ENST00000486311 CABYRO75952 493 aa26.32■■□□□ 1.8
SREBF1-214ENST00000486311 FSCN1Q16658 493 aaKnown RBP26.32■■□□□ 1.8
SREBF1-214ENST00000486311 CCDC178Q5BJE1 867 aa26.32■■□□□ 1.8
SREBF1-214ENST00000486311 GPATCH4Q5T3I0 446 aaKnown RBP26.32■■□□□ 1.8
SREBF1-214ENST00000486311 ZNF697Q5TEC3 545 aa26.32■■□□□ 1.8
SREBF1-214ENST00000486311 EEPD1Q7L9B9 569 aa26.32■■□□□ 1.8
SREBF1-214ENST00000486311 ZKSCAN3Q9BRR0 538 aa26.32■■□□□ 1.8
SREBF1-214ENST00000486311 WDR19Q8NEZ3 1342 aa26.32■■□□□ 1.8
SREBF1-214ENST00000486311 MCM3APO60318 1980 aa26.31■■□□□ 1.8
SREBF1-214ENST00000486311 DYNC1LI2O43237 492 aaPredicted RBP26.31■■□□□ 1.8
SREBF1-214ENST00000486311 ALDH5A1P51649 535 aaPredicted RBP26.31■■□□□ 1.8
SREBF1-214ENST00000486311 CXCL17Q6UXB2 119 aa26.31■■□□□ 1.8
SREBF1-214ENST00000486311 FAM126BQ8IXS8 530 aa26.31■■□□□ 1.8
SREBF1-214ENST00000486311 ANKS1AQ92625 1134 aa26.31■■□□□ 1.8
SREBF1-214ENST00000486311 RNPC3Q96LT9 517 aaKnown RBP26.31■■□□□ 1.8
SREBF1-214ENST00000486311 PTPDC1A2A3K4 754 aa26.3■■□□□ 1.8
SREBF1-214ENST00000486311 KDM4AO75164 1064 aa26.3■■□□□ 1.8
SREBF1-214ENST00000486311 PTGS1P23219 599 aa26.3■■□□□ 1.8
SREBF1-214ENST00000486311 MFSD5Q6N075 450 aa26.3■■□□□ 1.8
SREBF1-214ENST00000486311 IQCA1Q86XH1 822 aa26.3■■□□□ 1.8
SREBF1-214ENST00000486311 SLC43A3Q8NBI5 491 aa26.3■■□□□ 1.8
SREBF1-214ENST00000486311 FAM161BQ96MY7 647 aa26.3■■□□□ 1.8
SREBF1-214ENST00000486311 TLR3O15455 904 aaKnown RBP26.29■■□□□ 1.8
SREBF1-214ENST00000486311 ZEB2O60315 1214 aa26.29■■□□□ 1.8
SREBF1-214ENST00000486311 TMEM63BQ5T3F8 832 aa26.29■■□□□ 1.8
SREBF1-214ENST00000486311 SLC30A10Q6XR72 485 aa26.29■■□□□ 1.8
SREBF1-214ENST00000486311 RNF207Q6ZRF8 634 aa26.29■■□□□ 1.8
SREBF1-214ENST00000486311 KIAA1211Q6ZU35 1233 aa26.29■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms