RNA–Protein interactions for RNA: ENST00000486210.1

MCF2L-226, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-226ENST00000486210 CD4P01730 458 aa20.77■□□□□ 0.92
MCF2L-226ENST00000486210 SLC4A3P48751 1232 aa20.77■□□□□ 0.92
MCF2L-226ENST00000486210 TMEM199Q8N511 208 aa20.77■□□□□ 0.92
MCF2L-226ENST00000486210 PRPF38AQ8NAV1 312 aaKnown RBP20.77■□□□□ 0.92
MCF2L-226ENST00000486210 ATXN2LQ8WWM7 1075 aaKnown RBP20.77■□□□□ 0.92
MCF2L-226ENST00000486210 LSG1Q9H089 658 aaKnown RBP20.77■□□□□ 0.92
MCF2L-226ENST00000486210 ABHD16BQ9H3Z7 469 aa20.77■□□□□ 0.92
MCF2L-226ENST00000486210 RAVER2Q9HCJ3 691 aaKnown RBP20.77■□□□□ 0.92
MCF2L-226ENST00000486210 LRRC37A2A6NM11 1700 aa20.76■□□□□ 0.91
MCF2L-226ENST00000486210 FGAP02671 866 aa20.76■□□□□ 0.91
MCF2L-226ENST00000486210 PSRC1Q6PGN9 363 aaPredicted RBP20.76■□□□□ 0.91
MCF2L-226ENST00000486210 ARMCX2Q7L311 632 aa20.76■□□□□ 0.91
MCF2L-226ENST00000486210 STK11IPQ8N1F8 1099 aa20.76■□□□□ 0.91
MCF2L-226ENST00000486210 ASB2Q96Q27 587 aa20.76■□□□□ 0.91
MCF2L-226ENST00000486210 DSCC1Q9BVC3 393 aa20.76■□□□□ 0.91
MCF2L-226ENST00000486210 CXXC1Q9P0U4 656 aaPredicted RBP20.76■□□□□ 0.91
MCF2L-226ENST00000486210 THEGQ9P2T0 379 aa20.76■□□□□ 0.91
MCF2L-226ENST00000486210 CTDP1Q9Y5B0 961 aaPredicted RBP20.76■□□□□ 0.91
MCF2L-226ENST00000486210 CHD9Q3L8U1 2897 aa20.76■□□□□ 0.91
MCF2L-226ENST00000486210 IGKV6D-41A0A0C4DH26 115 aa20.75■□□□□ 0.91
MCF2L-226ENST00000486210 CYP2C18P33260 490 aa20.75■□□□□ 0.91
MCF2L-226ENST00000486210 NKX3-2P78367 333 aa20.75■□□□□ 0.91
MCF2L-226ENST00000486210 ALX1Q15699 326 aa20.75■□□□□ 0.91
MCF2L-226ENST00000486210 C8orf34Q49A92 452 aa20.75■□□□□ 0.91
MCF2L-226ENST00000486210 GNASQ5JWF2 1037 aa20.75■□□□□ 0.91
MCF2L-226ENST00000486210 CCDC174Q6PII3 467 aa20.75■□□□□ 0.91
MCF2L-226ENST00000486210 HERVK_113Q902F9 699 aa20.75■□□□□ 0.91
MCF2L-226ENST00000486210 VTI1AQ96AJ9 217 aa20.75■□□□□ 0.91
MCF2L-226ENST00000486210 NACAP1Q9BZK3 213 aa20.75■□□□□ 0.91
MCF2L-226ENST00000486210 NAPBQ9H115 298 aa20.75■□□□□ 0.91
MCF2L-226ENST00000486210 SLC38A10Q9HBR0 1119 aa20.75■□□□□ 0.91
MCF2L-226ENST00000486210 ASTN1O14525 1302 aa20.75■□□□□ 0.91
MCF2L-226ENST00000486210 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.74■□□□□ 0.91
MCF2L-226ENST00000486210 ZBED4O75132 1171 aa20.74■□□□□ 0.91
MCF2L-226ENST00000486210 BEX3Q00994 111 aa20.74■□□□□ 0.91
MCF2L-226ENST00000486210 CCDC144CPQ8IYA2 1237 aa20.74■□□□□ 0.91
MCF2L-226ENST00000486210 ZNF444Q8N0Y2 327 aaPredicted RBP20.74■□□□□ 0.91
MCF2L-226ENST00000486210 ANKRD35Q8N283 1001 aa20.74■□□□□ 0.91
MCF2L-226ENST00000486210 KIFC2Q96AC6 838 aa20.74■□□□□ 0.91
MCF2L-226ENST00000486210 NKX2-4Q9H2Z4 354 aa20.74■□□□□ 0.91
MCF2L-226ENST00000486210 SPC25Q9HBM1 224 aa20.74■□□□□ 0.91
MCF2L-226ENST00000486210 IL23AQ9NPF7 189 aa20.74■□□□□ 0.91
MCF2L-226ENST00000486210 ANO2Q9NQ90 1003 aa20.74■□□□□ 0.91
MCF2L-226ENST00000486210 UMODL1Q5DID0 1318 aa20.74■□□□□ 0.91
MCF2L-226ENST00000486210 TLR3O15455 904 aaKnown RBP20.73■□□□□ 0.91
MCF2L-226ENST00000486210 CNTN2Q02246 1040 aa20.73■□□□□ 0.91
MCF2L-226ENST00000486210 CCDC85BQ15834 202 aaPredicted RBP20.73■□□□□ 0.91
MCF2L-226ENST00000486210 SLC43A3Q8NBI5 491 aa20.73■□□□□ 0.91
MCF2L-226ENST00000486210 ADAMTS19Q8TE59 1207 aa20.73■□□□□ 0.91
MCF2L-226ENST00000486210 CLIP2Q9UDT6 1046 aa20.73■□□□□ 0.91
MCF2L-226ENST00000486210 YBX2Q9Y2T7 364 aaKnown RBP20.73■□□□□ 0.91
MCF2L-226ENST00000486210 SLC3A2P08195 630 aaKnown RBP20.72■□□□□ 0.91
MCF2L-226ENST00000486210 PTGS1P23219 599 aa20.72■□□□□ 0.91
MCF2L-226ENST00000486210 RAB30Q15771 203 aa20.72■□□□□ 0.91
MCF2L-226ENST00000486210 KIAA1211Q6ZU35 1233 aa20.72■□□□□ 0.91
MCF2L-226ENST00000486210 CHST13Q8NET6 341 aa20.72■□□□□ 0.91
MCF2L-226ENST00000486210 MAP4K1Q92918 833 aa20.72■□□□□ 0.91
MCF2L-226ENST00000486210 TCF20Q9UGU0 1960 aaKnown RBP20.72■□□□□ 0.91
MCF2L-226ENST00000486210 LCTP09848 1927 aa20.71■□□□□ 0.91
MCF2L-226ENST00000486210 SEC24BO95487 1268 aa20.71■□□□□ 0.91
MCF2L-226ENST00000486210 IGFBP4P22692 258 aa20.71■□□□□ 0.91
MCF2L-226ENST00000486210 MRPS5P82675 430 aaKnown RBP20.71■□□□□ 0.91
MCF2L-226ENST00000486210 MKL1Q969V6 931 aa20.71■□□□□ 0.91
MCF2L-226ENST00000486210 FBXO40Q9UH90 709 aa20.71■□□□□ 0.91
MCF2L-226ENST00000486210 MSRAQ9UJ68 235 aa20.71■□□□□ 0.91
MCF2L-226ENST00000486210 FEM1BQ9UK73 627 aa20.71■□□□□ 0.91
MCF2L-226ENST00000486210 GNEQ9Y223 722 aaKnown RBP20.71■□□□□ 0.91
MCF2L-226ENST00000486210 RBM8AQ9Y5S9 174 aaKnown RBP20.71■□□□□ 0.91
MCF2L-226ENST00000486210 GRIN2DO15399 1336 aa20.71■□□□□ 0.91
MCF2L-226ENST00000486210 ZMYM6O95789 1325 aa20.71■□□□□ 0.91
MCF2L-226ENST00000486210 CHD7Q9P2D1 2997 aa20.7■□□□□ 0.9
MCF2L-226ENST00000486210 FGBP02675 491 aa20.7■□□□□ 0.9
MCF2L-226ENST00000486210 OAZ1P54368 228 aa20.7■□□□□ 0.9
MCF2L-226ENST00000486210 HAND2P61296 217 aa20.7■□□□□ 0.9
MCF2L-226ENST00000486210 CTDSPL2Q05D32 466 aa20.7■□□□□ 0.9
MCF2L-226ENST00000486210 PDE4BQ07343 736 aa20.7■□□□□ 0.9
MCF2L-226ENST00000486210 PPARAQ07869 468 aa20.7■□□□□ 0.9
MCF2L-226ENST00000486210 CXCL17Q6UXB2 119 aa20.7■□□□□ 0.9
MCF2L-226ENST00000486210 FAM133AQ8N9E0 248 aa20.7■□□□□ 0.9
MCF2L-226ENST00000486210 VWCEQ96DN2 955 aa20.7■□□□□ 0.9
MCF2L-226ENST00000486210 CEP95Q96GE4 821 aa20.7■□□□□ 0.9
MCF2L-226ENST00000486210 UHRF1Q96T88 793 aaPredicted RBP20.7■□□□□ 0.9
MCF2L-226ENST00000486210 HIPK3Q9H422 1215 aa20.7■□□□□ 0.9
MCF2L-226ENST00000486210 SOWAHBA6NEL2 793 aa20.69■□□□□ 0.9
MCF2L-226ENST00000486210 TNFAIP2Q03169 654 aa20.69■□□□□ 0.9
MCF2L-226ENST00000486210 OTOP2Q7RTS6 562 aa20.69■□□□□ 0.9
MCF2L-226ENST00000486210 LRRC47Q8N1G4 583 aaKnown RBP20.69■□□□□ 0.9
MCF2L-226ENST00000486210 INCENPQ9NQS7 918 aa20.69■□□□□ 0.9
MCF2L-226ENST00000486210 HOMER2Q9NSB8 354 aa20.69■□□□□ 0.9
MCF2L-226ENST00000486210 ISY1Q9ULR0 285 aaKnown RBP20.69■□□□□ 0.9
MCF2L-226ENST00000486210 DDX49Q9Y6V7 483 aaKnown RBP20.69■□□□□ 0.9
MCF2L-226ENST00000486210 U3KPZ7 1027 aaPredicted RBP20.69■□□□□ 0.9
MCF2L-226ENST00000486210 REV3LO60673 3130 aa20.69■□□□□ 0.9
MCF2L-226ENST00000486210 PRDM1O75626 825 aa20.68■□□□□ 0.9
MCF2L-226ENST00000486210 TSPY3P0CV98 308 aa20.68■□□□□ 0.9
MCF2L-226ENST00000486210 TSPY8P0CW00 308 aa20.68■□□□□ 0.9
MCF2L-226ENST00000486210 RABGGTBP53611 331 aa20.68■□□□□ 0.9
MCF2L-226ENST00000486210 CCL23P55773 120 aa20.68■□□□□ 0.9
MCF2L-226ENST00000486210 PPP4R3BQ5MIZ7 849 aa20.68■□□□□ 0.9
MCF2L-226ENST00000486210 GMCL1P1Q8NEA9 526 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms