RNA–Protein interactions for RNA: ENST00000486080.5

COL9A1-207, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,844 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-207ENST00000486080 RBM46Q8TBY0 533 aaKnown RBP16.49■□□□□ 0.23
COL9A1-207ENST00000486080 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.49■□□□□ 0.23
COL9A1-207ENST00000486080 PPP1R9AQ9ULJ8 1098 aa16.49■□□□□ 0.23
COL9A1-207ENST00000486080 ZNF536O15090 1300 aa16.48■□□□□ 0.23
COL9A1-207ENST00000486080 SPDYE5A6NIY4 337 aa16.48■□□□□ 0.23
COL9A1-207ENST00000486080 OPLAHO14841 1288 aa16.48■□□□□ 0.23
COL9A1-207ENST00000486080 LIG1P18858 919 aa16.48■□□□□ 0.23
COL9A1-207ENST00000486080 CLK2P49760 499 aaKnown RBP16.48■□□□□ 0.23
COL9A1-207ENST00000486080 MRPL12P52815 198 aaKnown RBP16.48■□□□□ 0.23
COL9A1-207ENST00000486080 WNK4Q96J92 1243 aa16.48■□□□□ 0.23
COL9A1-207ENST00000486080 AGBL1Q96MI9 1066 aa16.48■□□□□ 0.23
COL9A1-207ENST00000486080 MYH7BA7E2Y1 1941 aa16.48■□□□□ 0.23
COL9A1-207ENST00000486080 LOC285556D6RIA3 1793 aa16.48■□□□□ 0.23
COL9A1-207ENST00000486080 TRAPPC10P48553 1259 aa16.47■□□□□ 0.23
COL9A1-207ENST00000486080 NONOQ15233 471 aaKnown RBP eCLIP16.47■□□□□ 0.23
COL9A1-207ENST00000486080 AXDND1Q5T1B0 1012 aaPredicted RBP16.47■□□□□ 0.23
COL9A1-207ENST00000486080 TREML2Q5T2D2 321 aa16.47■□□□□ 0.23
COL9A1-207ENST00000486080 OPTNQ96CV9 577 aa16.47■□□□□ 0.23
COL9A1-207ENST00000486080 ATG4CQ96DT6 458 aa16.47■□□□□ 0.23
COL9A1-207ENST00000486080 SLC38A10Q9HBR0 1119 aa16.47■□□□□ 0.23
COL9A1-207ENST00000486080 MEIS2O14770 477 aa16.47■□□□□ 0.23
COL9A1-207ENST00000486080 PPP6R2O75170 966 aa16.47■□□□□ 0.23
COL9A1-207ENST00000486080 MCM7P33993 719 aa16.47■□□□□ 0.23
COL9A1-207ENST00000486080 CATSPERGQ6ZRH7 1159 aa16.47■□□□□ 0.23
COL9A1-207ENST00000486080 TBCKQ8TEA7 893 aa16.47■□□□□ 0.23
COL9A1-207ENST00000486080 CLIC6Q96NY7 704 aa16.47■□□□□ 0.23
COL9A1-207ENST00000486080 TMEM63CQ9P1W3 806 aa16.47■□□□□ 0.23
COL9A1-207ENST00000486080 CELF2O95319 508 aaKnown RBP16.46■□□□□ 0.23
COL9A1-207ENST00000486080 ICAM1P05362 532 aa16.46■□□□□ 0.23
COL9A1-207ENST00000486080 GJA5P36382 358 aa16.46■□□□□ 0.23
COL9A1-207ENST00000486080 PPIL2Q13356 520 aa16.46■□□□□ 0.23
COL9A1-207ENST00000486080 ADALQ6DHV7 355 aa16.46■□□□□ 0.23
COL9A1-207ENST00000486080 CCAR1Q8IX12 1150 aaKnown RBP16.46■□□□□ 0.23
COL9A1-207ENST00000486080 CPXCR1Q8N123 301 aa16.46■□□□□ 0.23
COL9A1-207ENST00000486080 P2RX7Q99572 595 aaKnown RBP16.46■□□□□ 0.23
COL9A1-207ENST00000486080 GOLPH3LQ9H4A5 285 aa16.46■□□□□ 0.23
COL9A1-207ENST00000486080 RAVER2Q9HCJ3 691 aaKnown RBP16.46■□□□□ 0.23
COL9A1-207ENST00000486080 A0A0G2JLL6 359 aaPredicted RBP16.45■□□□□ 0.22
COL9A1-207ENST00000486080 VWA5AO00534 786 aa16.45■□□□□ 0.22
COL9A1-207ENST00000486080 GRIN1Q05586 938 aa16.45■□□□□ 0.22
COL9A1-207ENST00000486080 COG2Q14746 738 aa16.45■□□□□ 0.22
COL9A1-207ENST00000486080 GADL1Q6ZQY3 521 aa16.45■□□□□ 0.22
COL9A1-207ENST00000486080 PRRT2Q7Z6L0 340 aaPredicted RBP16.45■□□□□ 0.22
COL9A1-207ENST00000486080 TBC1D5Q92609 795 aa16.45■□□□□ 0.22
COL9A1-207ENST00000486080 SLC10A4Q96EP9 437 aa16.45■□□□□ 0.22
COL9A1-207ENST00000486080 GLT8D2Q9H1C3 349 aa16.45■□□□□ 0.22
COL9A1-207ENST00000486080 GBA2Q9HCG7 927 aaPredicted RBP16.45■□□□□ 0.22
COL9A1-207ENST00000486080 CCPG1Q9ULG6 757 aa16.45■□□□□ 0.22
COL9A1-207ENST00000486080 CEP131Q9UPN4 1083 aa16.45■□□□□ 0.22
COL9A1-207ENST00000486080 KCNH4Q9UQ05 1017 aa16.45■□□□□ 0.22
COL9A1-207ENST00000486080 CXCL11O14625 94 aa16.45■□□□□ 0.22
COL9A1-207ENST00000486080 EDIL3O43854 480 aa16.45■□□□□ 0.22
COL9A1-207ENST00000486080 ZBED4O75132 1171 aa16.45■□□□□ 0.22
COL9A1-207ENST00000486080 ITGBL1O95965 494 aaPredicted RBP16.45■□□□□ 0.22
COL9A1-207ENST00000486080 HOXA13P31271 388 aaPredicted RBP16.45■□□□□ 0.22
COL9A1-207ENST00000486080 DSG3P32926 999 aa16.45■□□□□ 0.22
COL9A1-207ENST00000486080 PTGDRQ13258 359 aa16.45■□□□□ 0.22
COL9A1-207ENST00000486080 LETM2Q2VYF4 491 aa16.45■□□□□ 0.22
COL9A1-207ENST00000486080 CHADLQ6NUI6 762 aa16.45■□□□□ 0.22
COL9A1-207ENST00000486080 JMYQ8N9B5 988 aa16.45■□□□□ 0.22
COL9A1-207ENST00000486080 FBXO2Q9UK22 296 aaPredicted RBP16.45■□□□□ 0.22
COL9A1-207ENST00000486080 TRPM7Q96QT4 1865 aa16.44■□□□□ 0.22
COL9A1-207ENST00000486080 A0A1W2PQ27 194 aa16.44■□□□□ 0.22
COL9A1-207ENST00000486080 A0A1W2PQ64 194 aa16.44■□□□□ 0.22
COL9A1-207ENST00000486080 A0A1W2PQD8 194 aa16.44■□□□□ 0.22
COL9A1-207ENST00000486080 YY1P25490 414 aa16.44■□□□□ 0.22
COL9A1-207ENST00000486080 TRAF1Q13077 416 aa16.44■□□□□ 0.22
COL9A1-207ENST00000486080 NEK8Q86SG6 692 aa16.44■□□□□ 0.22
COL9A1-207ENST00000486080 KRI1Q8N9T8 703 aaKnown RBP16.44■□□□□ 0.22
COL9A1-207ENST00000486080 FSIP1Q8NA03 581 aa16.44■□□□□ 0.22
COL9A1-207ENST00000486080 ADAMTS5Q9UNA0 930 aa16.44■□□□□ 0.22
COL9A1-207ENST00000486080 MRPL11Q9Y3B7 192 aaKnown RBP16.44■□□□□ 0.22
COL9A1-207ENST00000486080 ABCB11O95342 1321 aa16.44■□□□□ 0.22
COL9A1-207ENST00000486080 CCNT1O60563 726 aaKnown RBP16.43■□□□□ 0.22
COL9A1-207ENST00000486080 CUTAO60888 179 aa16.43■□□□□ 0.22
COL9A1-207ENST00000486080 NR1I2O75469 434 aa16.43■□□□□ 0.22
COL9A1-207ENST00000486080 PTPREP23469 700 aa16.43■□□□□ 0.22
COL9A1-207ENST00000486080 MOGSQ13724 837 aa16.43■□□□□ 0.22
COL9A1-207ENST00000486080 CST9Q5W186 159 aa16.43■□□□□ 0.22
COL9A1-207ENST00000486080 C4orf32Q8N8J7 132 aa16.43■□□□□ 0.22
COL9A1-207ENST00000486080 REPS2Q8NFH8 660 aa16.43■□□□□ 0.22
COL9A1-207ENST00000486080 CTDP1Q9Y5B0 961 aaPredicted RBP16.43■□□□□ 0.22
COL9A1-207ENST00000486080 A0A1B0GVL5 298 aa16.42■□□□□ 0.22
COL9A1-207ENST00000486080 SPDYE16A6NNV3 312 aaPredicted RBP16.42■□□□□ 0.22
COL9A1-207ENST00000486080 BMP15O95972 392 aa16.42■□□□□ 0.22
COL9A1-207ENST00000486080 CFBP00751 764 aa16.42■□□□□ 0.22
COL9A1-207ENST00000486080 ALAS1P13196 640 aa16.42■□□□□ 0.22
COL9A1-207ENST00000486080 FKBP1BP68106 108 aa16.42■□□□□ 0.22
COL9A1-207ENST00000486080 ATP2C1P98194 919 aaPredicted RBP16.42■□□□□ 0.22
COL9A1-207ENST00000486080 SPECC1Q5M775 1068 aa16.42■□□□□ 0.22
COL9A1-207ENST00000486080 SHC4Q6S5L8 630 aa16.42■□□□□ 0.22
COL9A1-207ENST00000486080 C2orf69Q8N8R5 385 aa16.42■□□□□ 0.22
COL9A1-207ENST00000486080 PROCA1Q8NCQ7 364 aaPredicted RBP16.42■□□□□ 0.22
COL9A1-207ENST00000486080 MRPS27Q92552 414 aaKnown RBP16.42■□□□□ 0.22
COL9A1-207ENST00000486080 ANO3Q9BYT9 981 aa16.42■□□□□ 0.22
COL9A1-207ENST00000486080 HOMER2Q9NSB8 354 aa16.42■□□□□ 0.22
COL9A1-207ENST00000486080 DACT1Q9NYF0 836 aa16.42■□□□□ 0.22
COL9A1-207ENST00000486080 SRPRBQ9Y5M8 271 aaKnown RBP16.42■□□□□ 0.22
COL9A1-207ENST00000486080 UNCXA6NJT0 531 aa16.42■□□□□ 0.22
COL9A1-207ENST00000486080 PIK3CDO00329 1044 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms