RNA–Protein interactions for RNA: ENST00000485871.1

SND1-212, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-212ENST00000485871 HHIPL1Q96JK4 782 aa13.01□□□□□ -0.33
SND1-212ENST00000485871 AMNQ9BXJ7 453 aa13.01□□□□□ -0.33
SND1-212ENST00000485871 FOXP1Q9H334 677 aaPredicted RBP13.01□□□□□ -0.33
SND1-212ENST00000485871 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.01□□□□□ -0.33
SND1-212ENST00000485871 VWA5AO00534 786 aa13□□□□□ -0.33
SND1-212ENST00000485871 FDX1P10109 184 aa13□□□□□ -0.33
SND1-212ENST00000485871 CALML3P27482 149 aa13□□□□□ -0.33
SND1-212ENST00000485871 KRT2P35908 639 aa13□□□□□ -0.33
SND1-212ENST00000485871 NAPAP54920 295 aa13□□□□□ -0.33
SND1-212ENST00000485871 NLRP5P59047 1200 aa13□□□□□ -0.33
SND1-212ENST00000485871 NOGQ13253 232 aa13□□□□□ -0.33
SND1-212ENST00000485871 SNAPC2Q13487 334 aa13□□□□□ -0.33
SND1-212ENST00000485871 COG2Q14746 738 aa13□□□□□ -0.33
SND1-212ENST00000485871 NOM1Q5C9Z4 860 aaKnown RBP13□□□□□ -0.33
SND1-212ENST00000485871 EARS2Q5JPH6 523 aaKnown RBP13□□□□□ -0.33
SND1-212ENST00000485871 GALNT17Q6IS24 598 aa13□□□□□ -0.33
SND1-212ENST00000485871 LBX2Q6XYB7 198 aa13□□□□□ -0.33
SND1-212ENST00000485871 GADL1Q6ZQY3 521 aa13□□□□□ -0.33
SND1-212ENST00000485871 FBXO11Q86XK2 927 aa13□□□□□ -0.33
SND1-212ENST00000485871 BLIDQ8IZY5 108 aa13□□□□□ -0.33
SND1-212ENST00000485871 PCDHA4Q9UN74 947 aa13□□□□□ -0.33
SND1-212ENST00000485871 TESPA1A2RU30 521 aaPredicted RBP12.99□□□□□ -0.33
SND1-212ENST00000485871 FAM205CA6NFA0 338 aa12.99□□□□□ -0.33
SND1-212ENST00000485871 SMCO2A6NFE2 343 aa12.99□□□□□ -0.33
SND1-212ENST00000485871 TNRC18O15417 2968 aaPredicted RBP12.99□□□□□ -0.33
SND1-212ENST00000485871 ICAM1P05362 532 aa12.99□□□□□ -0.33
SND1-212ENST00000485871 CLK2P49760 499 aaKnown RBP12.99□□□□□ -0.33
SND1-212ENST00000485871 MYSM1Q5VVJ2 828 aa12.99□□□□□ -0.33
SND1-212ENST00000485871 MCTP1Q6DN14 999 aa12.99□□□□□ -0.33
SND1-212ENST00000485871 RGMBQ6NW40 437 aa12.99□□□□□ -0.33
SND1-212ENST00000485871 FASTKD5Q7L8L6 764 aaKnown RBP12.99□□□□□ -0.33
SND1-212ENST00000485871 BRAPQ7Z569 592 aa12.99□□□□□ -0.33
SND1-212ENST00000485871 NOSTRINQ8IVI9 506 aa12.99□□□□□ -0.33
SND1-212ENST00000485871 CCDC12Q8WUD4 166 aaPredicted RBP12.99□□□□□ -0.33
SND1-212ENST00000485871 BRI3BPQ8WY22 251 aa12.99□□□□□ -0.33
SND1-212ENST00000485871 ZNF214Q9UL59 606 aaPredicted RBP12.99□□□□□ -0.33
SND1-212ENST00000485871 PCDHA1Q9Y5I3 950 aa12.99□□□□□ -0.33
SND1-212ENST00000485871 ATP6V1DQ9Y5K8 247 aa12.99□□□□□ -0.33
SND1-212ENST00000485871 FAM155AB1AL88 458 aaPredicted RBP12.98□□□□□ -0.33
SND1-212ENST00000485871 ATP2A1O14983 1001 aa12.98□□□□□ -0.33
SND1-212ENST00000485871 SLC10A3P09131 477 aa12.98□□□□□ -0.33
SND1-212ENST00000485871 TOB1P50616 345 aaPredicted RBP12.98□□□□□ -0.33
SND1-212ENST00000485871 GTF2A2P52657 109 aa12.98□□□□□ -0.33
SND1-212ENST00000485871 OAZ1P54368 228 aa12.98□□□□□ -0.33
SND1-212ENST00000485871 GHRHRQ02643 423 aa12.98□□□□□ -0.33
SND1-212ENST00000485871 DNM1Q05193 864 aaKnown RBP12.98□□□□□ -0.33
SND1-212ENST00000485871 SAFBQ15424 915 aaKnown RBP eCLIP12.98□□□□□ -0.33
SND1-212ENST00000485871 CCDC174Q6PII3 467 aa12.98□□□□□ -0.33
SND1-212ENST00000485871 RASGRP4Q8TDF6 673 aa12.98□□□□□ -0.33
SND1-212ENST00000485871 P2RX7Q99572 595 aaKnown RBP12.98□□□□□ -0.33
SND1-212ENST00000485871 ASCC2Q9H1I8 757 aaPredicted RBP12.98□□□□□ -0.33
SND1-212ENST00000485871 RIC8AQ9NPQ8 531 aa12.98□□□□□ -0.33
SND1-212ENST00000485871 PCDHA6Q9UN73 950 aa12.98□□□□□ -0.33
SND1-212ENST00000485871 SLC45A1Q9Y2W3 748 aa12.98□□□□□ -0.33
SND1-212ENST00000485871 PCDHA8Q9Y5H6 950 aa12.98□□□□□ -0.33
SND1-212ENST00000485871 ABCB11O95342 1321 aa12.97□□□□□ -0.33
SND1-212ENST00000485871 CCL15-CCL14A0A0B4J2E2 113 aa12.97□□□□□ -0.33
SND1-212ENST00000485871 BTBD19C9JJ37 291 aa12.97□□□□□ -0.33
SND1-212ENST00000485871 MEIS2O14770 477 aa12.97□□□□□ -0.33
SND1-212ENST00000485871 CETPP11597 493 aa12.97□□□□□ -0.33
SND1-212ENST00000485871 GNA11P29992 359 aa12.97□□□□□ -0.33
SND1-212ENST00000485871 ADCY7P51828 1080 aa12.97□□□□□ -0.33
SND1-212ENST00000485871 TRAF1Q13077 416 aa12.97□□□□□ -0.33
SND1-212ENST00000485871 TMEM132BQ14DG7 1078 aa12.97□□□□□ -0.33
SND1-212ENST00000485871 CCL15Q16663 113 aa12.97□□□□□ -0.33
SND1-212ENST00000485871 KLHL40Q2TBA0 621 aa12.97□□□□□ -0.33
SND1-212ENST00000485871 USH1GQ495M9 461 aa12.97□□□□□ -0.33
SND1-212ENST00000485871 ANKRD23Q86SG2 305 aa12.97□□□□□ -0.33
SND1-212ENST00000485871 CLEC4DQ8WXI8 215 aa12.97□□□□□ -0.33
SND1-212ENST00000485871 AGBL1Q96MI9 1066 aa12.97□□□□□ -0.33
SND1-212ENST00000485871 USP28Q96RU2 1077 aa12.97□□□□□ -0.33
SND1-212ENST00000485871 RAVER2Q9HCJ3 691 aaKnown RBP12.97□□□□□ -0.33
SND1-212ENST00000485871 C6orf50Q9HD87 102 aa12.97□□□□□ -0.33
SND1-212ENST00000485871 HOXC10Q9NYD6 342 aa12.97□□□□□ -0.33
SND1-212ENST00000485871 ZNFX1Q9P2E3 1918 aaKnown RBP12.96□□□□□ -0.33
SND1-212ENST00000485871 PIK3CDO00329 1044 aa12.96□□□□□ -0.33
SND1-212ENST00000485871 WNT7AO00755 349 aa12.96□□□□□ -0.33
SND1-212ENST00000485871 EDIL3O43854 480 aa12.96□□□□□ -0.33
SND1-212ENST00000485871 ZBED4O75132 1171 aa12.96□□□□□ -0.33
SND1-212ENST00000485871 CNMDO75829 334 aa12.96□□□□□ -0.33
SND1-212ENST00000485871 HERVK_113P62684 666 aa12.96□□□□□ -0.33
SND1-212ENST00000485871 MKRN3Q13064 507 aaKnown RBP12.96□□□□□ -0.33
SND1-212ENST00000485871 FOXD4L6Q3SYB3 417 aaPredicted RBP12.96□□□□□ -0.33
SND1-212ENST00000485871 SAMD1Q6SPF0 538 aaPredicted RBP12.96□□□□□ -0.33
SND1-212ENST00000485871 FOXD4L3Q6VB84 417 aaPredicted RBP12.96□□□□□ -0.33
SND1-212ENST00000485871 TEX2Q8IWB9 1127 aa12.96□□□□□ -0.33
SND1-212ENST00000485871 TMEM87AQ8NBN3 555 aa12.96□□□□□ -0.33
SND1-212ENST00000485871 ZIC5Q96T25 663 aa12.96□□□□□ -0.33
SND1-212ENST00000485871 PTPN18Q99952 460 aa12.96□□□□□ -0.33
SND1-212ENST00000485871 FTOQ9C0B1 505 aaKnown RBP eCLIP12.96□□□□□ -0.33
SND1-212ENST00000485871 BRMS1Q9HCU9 246 aa12.96□□□□□ -0.33
SND1-212ENST00000485871 TMEM260Q9NX78 707 aa12.96□□□□□ -0.33
SND1-212ENST00000485871 BTBD7Q9P203 1132 aa12.96□□□□□ -0.33
SND1-212ENST00000485871 PNMA2Q9UL42 364 aa12.96□□□□□ -0.33
SND1-212ENST00000485871 CCPG1Q9ULG6 757 aa12.96□□□□□ -0.33
SND1-212ENST00000485871 CNPY2Q9Y2B0 182 aa12.96□□□□□ -0.33
SND1-212ENST00000485871 RIPK3Q9Y572 518 aa12.96□□□□□ -0.33
SND1-212ENST00000485871 MBD3O95983 291 aa12.95□□□□□ -0.34
SND1-212ENST00000485871 ZNF157P51786 506 aaPredicted RBP12.95□□□□□ -0.34
SND1-212ENST00000485871 PABPC4Q13310 644 aaKnown RBP eCLIP12.95□□□□□ -0.344e-8■■□□□ 13.8
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms