RNA–Protein interactions for RNA: ENST00000485749.1

RTN4-213, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 832 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-213ENST00000485749 CPEP16870 476 aa5.41□□□□□ -1.54
RTN4-213ENST00000485749 PDE6BP35913 854 aa5.41□□□□□ -1.54
RTN4-213ENST00000485749 ZNF157P51786 506 aaPredicted RBP5.41□□□□□ -1.54
RTN4-213ENST00000485749 ZNF143P52747 638 aaPredicted RBP5.41□□□□□ -1.54
RTN4-213ENST00000485749 NFKB2Q00653 900 aa5.41□□□□□ -1.54
RTN4-213ENST00000485749 PABPC4Q13310 644 aaKnown RBP eCLIP5.41□□□□□ -1.543e-7■■■□□ 18.3
RTN4-213ENST00000485749 NFE2Q16621 373 aaPredicted RBP5.41□□□□□ -1.54
RTN4-213ENST00000485749 AKAP4Q5JQC9 854 aa5.41□□□□□ -1.54
RTN4-213ENST00000485749 CDCP2Q5VXM1 449 aa5.41□□□□□ -1.54
RTN4-213ENST00000485749 VHLLQ6RSH7 139 aa5.41□□□□□ -1.54
RTN4-213ENST00000485749 RUFY4Q6ZNE9 571 aa5.41□□□□□ -1.54
RTN4-213ENST00000485749 PDZD3Q86UT5 571 aa5.41□□□□□ -1.54
RTN4-213ENST00000485749 GRIN3AQ8TCU5 1115 aa5.41□□□□□ -1.54
RTN4-213ENST00000485749 STK35Q8TDR2 534 aa5.41□□□□□ -1.54
RTN4-213ENST00000485749 CORO1BQ9BR76 489 aa5.41□□□□□ -1.54
RTN4-213ENST00000485749 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.41□□□□□ -1.54
RTN4-213ENST00000485749 RETREG1Q9H6L5 497 aa5.41□□□□□ -1.54
RTN4-213ENST00000485749 PPCSQ9HAB8 311 aa5.41□□□□□ -1.54
RTN4-213ENST00000485749 CBX8Q9HC52 389 aa5.41□□□□□ -1.54
RTN4-213ENST00000485749 INTS7Q9NVH2 962 aaKnown RBP5.41□□□□□ -1.54
RTN4-213ENST00000485749 GMIPQ9P107 970 aa5.41□□□□□ -1.54
RTN4-213ENST00000485749 ODF2LQ9ULJ1 636 aa5.41□□□□□ -1.54
RTN4-213ENST00000485749 DNAJC25-GNG10A0A024R161 153 aa5.4□□□□□ -1.54
RTN4-213ENST00000485749 SUSD5O60279 629 aa5.4□□□□□ -1.54
RTN4-213ENST00000485749 HTR3BO95264 441 aa5.4□□□□□ -1.54
RTN4-213ENST00000485749 C8AP07357 584 aa5.4□□□□□ -1.54
RTN4-213ENST00000485749 MYL3P08590 195 aa5.4□□□□□ -1.54
RTN4-213ENST00000485749 NME1P15531 152 aaKnown RBP5.4□□□□□ -1.54
RTN4-213ENST00000485749 RAB6AP20340 208 aa5.4□□□□□ -1.54
RTN4-213ENST00000485749 JAG1P78504 1218 aa5.4□□□□□ -1.54
RTN4-213ENST00000485749 KIAA2012Q0VF49 1180 aa5.4□□□□□ -1.54
RTN4-213ENST00000485749 POU4F3Q15319 338 aa5.4□□□□□ -1.54
RTN4-213ENST00000485749 ZKSCAN8Q15776 578 aaPredicted RBP5.4□□□□□ -1.54
RTN4-213ENST00000485749 SLC10A6Q3KNW5 377 aa5.4□□□□□ -1.54
RTN4-213ENST00000485749 ALDH1L2Q3SY69 923 aa5.4□□□□□ -1.54
RTN4-213ENST00000485749 CT47A1Q5JQC4 288 aaPredicted RBP5.4□□□□□ -1.54
RTN4-213ENST00000485749 TMEM201Q5SNT2 666 aa5.4□□□□□ -1.54
RTN4-213ENST00000485749 TAF3Q5VWG9 929 aa5.4□□□□□ -1.54
RTN4-213ENST00000485749 DYMQ7RTS9 669 aa5.4□□□□□ -1.54
RTN4-213ENST00000485749 RNF180Q86T96 592 aa5.4□□□□□ -1.54
RTN4-213ENST00000485749 LMNTD2Q8IXW0 634 aa5.4□□□□□ -1.54
RTN4-213ENST00000485749 NGDNQ8NEJ9 315 aaKnown RBP5.4□□□□□ -1.54
RTN4-213ENST00000485749 TSR2Q969E8 191 aaKnown RBP5.4□□□□□ -1.54
RTN4-213ENST00000485749 TTC14Q96N46 770 aa5.4□□□□□ -1.54
RTN4-213ENST00000485749 PAIP2Q9BPZ3 127 aaKnown RBP5.4□□□□□ -1.54
RTN4-213ENST00000485749 CXorf56Q9H5V9 222 aa5.4□□□□□ -1.54
RTN4-213ENST00000485749 LRRC4CQ9HCJ2 640 aa5.4□□□□□ -1.54
RTN4-213ENST00000485749 POLG2Q9UHN1 485 aa5.4□□□□□ -1.54
RTN4-213ENST00000485749 HDAC9Q9UKV0 1011 aa5.4□□□□□ -1.54
RTN4-213ENST00000485749 INTUQ9ULD6 942 aa5.4□□□□□ -1.54
RTN4-213ENST00000485749 ASAP1Q9ULH1 1129 aa5.4□□□□□ -1.54
RTN4-213ENST00000485749 ACTL7BQ9Y614 415 aa5.4□□□□□ -1.54
RTN4-213ENST00000485749 WASHC2CQ9Y4E1 1318 aa5.4□□□□□ -1.55
RTN4-213ENST00000485749 GOLGA6L22H0YM25 854 aa5.39□□□□□ -1.55
RTN4-213ENST00000485749 AGRPO00253 132 aa5.39□□□□□ -1.55
RTN4-213ENST00000485749 PDE8AO60658 829 aa5.39□□□□□ -1.55
RTN4-213ENST00000485749 RNASEH2AO75792 299 aaKnown RBP5.39□□□□□ -1.55
RTN4-213ENST00000485749 ALDH1L1O75891 902 aa5.39□□□□□ -1.55
RTN4-213ENST00000485749 GSTP1P09211 210 aaKnown RBP5.39□□□□□ -1.55
RTN4-213ENST00000485749 FAM163BP0C2L3 166 aa5.39□□□□□ -1.55
RTN4-213ENST00000485749 NAT2P11245 290 aa5.39□□□□□ -1.55
RTN4-213ENST00000485749 TDO2P48775 406 aa5.39□□□□□ -1.55
RTN4-213ENST00000485749 PTPN11Q06124 597 aaPredicted RBP5.39□□□□□ -1.55
RTN4-213ENST00000485749 PKN1Q16512 942 aa5.39□□□□□ -1.55
RTN4-213ENST00000485749 C10orf62Q5T681 223 aaPredicted RBP5.39□□□□□ -1.55
RTN4-213ENST00000485749 LCE1DQ5T752 114 aa5.39□□□□□ -1.55
RTN4-213ENST00000485749 WWC2Q6AWC2 1192 aa5.39□□□□□ -1.55
RTN4-213ENST00000485749 UNC5AQ6ZN44 842 aa5.39□□□□□ -1.55
RTN4-213ENST00000485749 UBE2Q1Q7Z7E8 422 aa5.39□□□□□ -1.55
RTN4-213ENST00000485749 SMAP1Q8IYB5 467 aaPredicted RBP5.39□□□□□ -1.55
RTN4-213ENST00000485749 MYRIPQ8NFW9 859 aa5.39□□□□□ -1.55
RTN4-213ENST00000485749 KISS1RQ969F8 398 aaPredicted RBP5.39□□□□□ -1.55
RTN4-213ENST00000485749 ANTXR1Q9H6X2 564 aa5.39□□□□□ -1.55
RTN4-213ENST00000485749 CNNM2Q9H8M5 875 aa5.39□□□□□ -1.55
RTN4-213ENST00000485749 ARNT2Q9HBZ2 717 aa5.39□□□□□ -1.55
RTN4-213ENST00000485749 NCOA5Q9HCD5 579 aaKnown RBP5.39□□□□□ -1.55
RTN4-213ENST00000485749 RBM28Q9NW13 759 aaKnown RBP5.39□□□□□ -1.55
RTN4-213ENST00000485749 AP4E1Q9UPM8 1137 aa5.39□□□□□ -1.55
RTN4-213ENST00000485749 DIS3Q9Y2L1 958 aaKnown RBP5.39□□□□□ -1.55
RTN4-213ENST00000485749 SYNGAP1Q96PV0 1343 aa5.39□□□□□ -1.55
RTN4-213ENST00000485749 SLC22A31A6NKX4 558 aa5.38□□□□□ -1.55
RTN4-213ENST00000485749 FAM170BA6NMN3 283 aa5.38□□□□□ -1.55
RTN4-213ENST00000485749 GSG1L2A8MUP6 293 aa5.38□□□□□ -1.55
RTN4-213ENST00000485749 SLC26A4O43511 780 aa5.38□□□□□ -1.55
RTN4-213ENST00000485749 GRIN3BO60391 1043 aa5.38□□□□□ -1.55
RTN4-213ENST00000485749 NFICP08651 508 aa5.38□□□□□ -1.55
RTN4-213ENST00000485749 MAOBP27338 520 aa5.38□□□□□ -1.55
RTN4-213ENST00000485749 CASQ1P31415 396 aa5.38□□□□□ -1.55
RTN4-213ENST00000485749 ADMP35318 185 aa5.38□□□□□ -1.55
RTN4-213ENST00000485749 CCNFP41002 786 aa5.38□□□□□ -1.55
RTN4-213ENST00000485749 ASPAP45381 313 aa5.38□□□□□ -1.55
RTN4-213ENST00000485749 PPM1FP49593 454 aaPredicted RBP5.38□□□□□ -1.55
RTN4-213ENST00000485749 SLC7A5Q01650 507 aa5.38□□□□□ -1.55
RTN4-213ENST00000485749 PDE4BQ07343 736 aa5.38□□□□□ -1.55
RTN4-213ENST00000485749 PLCL1Q15111 1095 aa5.38□□□□□ -1.55
RTN4-213ENST00000485749 SLC4A8Q2Y0W8 1093 aa5.38□□□□□ -1.55
RTN4-213ENST00000485749 GRAMD1BQ3KR37 738 aa5.38□□□□□ -1.55
RTN4-213ENST00000485749 BBS9Q3SYG4 887 aa5.38□□□□□ -1.55
RTN4-213ENST00000485749 TTLL5Q6EMB2 1281 aa5.38□□□□□ -1.55
RTN4-213ENST00000485749 NLRC3Q7RTR2 1065 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms