RNA–Protein interactions for RNA: ENST00000485122.6

EXOSC1-210, Transcript of exosome component 1, humanhuman

TSL 5 BASIC

Gene EXOSC1, Length 564 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-210ENST00000485122 MAP4K4O95819 1239 aaPredicted RBP12.35□□□□□ -0.43
EXOSC1-210ENST00000485122 COL9A3Q14050 684 aaPredicted RBP12.35□□□□□ -0.43
EXOSC1-210ENST00000485122 NOL8Q76FK4 1167 aaKnown RBP12.35□□□□□ -0.43
EXOSC1-210ENST00000485122 RIOX2Q8IUF8 465 aa12.35□□□□□ -0.43
EXOSC1-210ENST00000485122 MSL3Q8N5Y2 521 aaKnown RBP12.35□□□□□ -0.43
EXOSC1-210ENST00000485122 CCER1Q8TC90 406 aaPredicted RBP12.35□□□□□ -0.43
EXOSC1-210ENST00000485122 FGD4Q96M96 766 aa12.35□□□□□ -0.43
EXOSC1-210ENST00000485122 KATNBL1Q9H079 304 aa12.35□□□□□ -0.43
EXOSC1-210ENST00000485122 IGFLR1Q9H665 355 aa12.35□□□□□ -0.43
EXOSC1-210ENST00000485122 INCENPQ9NQS7 918 aa12.35□□□□□ -0.43
EXOSC1-210ENST00000485122 AATFQ9NY61 560 aaKnown RBP eCLIP12.35□□□□□ -0.43
EXOSC1-210ENST00000485122 SETXQ7Z333 2677 aaKnown RBP12.34□□□□□ -0.43
EXOSC1-210ENST00000485122 A0A1B0GUL7 405 aa12.34□□□□□ -0.43
EXOSC1-210ENST00000485122 H3BNC9 293 aa12.34□□□□□ -0.43
EXOSC1-210ENST00000485122 LMNAP02545 664 aaKnown RBP12.34□□□□□ -0.43
EXOSC1-210ENST00000485122 ICAM3P32942 547 aa12.34□□□□□ -0.43
EXOSC1-210ENST00000485122 GPNMBQ14956 572 aa12.34□□□□□ -0.43
EXOSC1-210ENST00000485122 SEPT2Q15019 361 aa12.34□□□□□ -0.43
EXOSC1-210ENST00000485122 ABCB5Q2M3G0 1257 aa12.34□□□□□ -0.43
EXOSC1-210ENST00000485122 TMEM63BQ5T3F8 832 aa12.34□□□□□ -0.43
EXOSC1-210ENST00000485122 TATDN1Q6P1N9 297 aa12.34□□□□□ -0.43
EXOSC1-210ENST00000485122 ARMCX2Q7L311 632 aa12.34□□□□□ -0.43
EXOSC1-210ENST00000485122 SPICE1Q8N0Z3 855 aa12.34□□□□□ -0.43
EXOSC1-210ENST00000485122 HLA-DOAP06340 250 aa12.33□□□□□ -0.44
EXOSC1-210ENST00000485122 SUPT20HL2P0C7V6 817 aa12.33□□□□□ -0.44
EXOSC1-210ENST00000485122 RFX5P48382 616 aaPredicted RBP12.33□□□□□ -0.44
EXOSC1-210ENST00000485122 ATXN1P54253 815 aaKnown RBP12.33□□□□□ -0.44
EXOSC1-210ENST00000485122 TNFAIP2Q03169 654 aa12.33□□□□□ -0.44
EXOSC1-210ENST00000485122 SLC4A10Q6U841 1118 aa12.33□□□□□ -0.44
EXOSC1-210ENST00000485122 RETREG2Q8NC44 543 aa12.33□□□□□ -0.44
EXOSC1-210ENST00000485122 MSLNLQ96KJ4 702 aa12.33□□□□□ -0.44
EXOSC1-210ENST00000485122 SMOC2Q9H3U7 446 aa12.33□□□□□ -0.44
EXOSC1-210ENST00000485122 ABHD16BQ9H3Z7 469 aa12.33□□□□□ -0.44
EXOSC1-210ENST00000485122 FBXO28Q9NVF7 368 aa12.33□□□□□ -0.44
EXOSC1-210ENST00000485122 RAI14Q9P0K7 980 aa12.33□□□□□ -0.44
EXOSC1-210ENST00000485122 GNEQ9Y223 722 aaKnown RBP12.33□□□□□ -0.44
EXOSC1-210ENST00000485122 OTOGLQ3ZCN5 2332 aa12.32□□□□□ -0.44
EXOSC1-210ENST00000485122 DNAJC25-GNG10A0A024R161 153 aa12.32□□□□□ -0.44
EXOSC1-210ENST00000485122 PITPNM1O00562 1244 aa12.32□□□□□ -0.44
EXOSC1-210ENST00000485122 LDHCP07864 332 aa12.32□□□□□ -0.44
EXOSC1-210ENST00000485122 ADRB1P08588 477 aa12.32□□□□□ -0.44
EXOSC1-210ENST00000485122 NDUFV1P49821 464 aa12.32□□□□□ -0.44
EXOSC1-210ENST00000485122 RRP1P56182 461 aaKnown RBP12.32□□□□□ -0.44
EXOSC1-210ENST00000485122 GSTO1P78417 241 aa12.32□□□□□ -0.44
EXOSC1-210ENST00000485122 FAM47CQ5HY64 1035 aa12.32□□□□□ -0.44
EXOSC1-210ENST00000485122 CLEC10AQ8IUN9 316 aa12.32□□□□□ -0.44
EXOSC1-210ENST00000485122 CRIPAKQ8N1N5 446 aa12.32□□□□□ -0.44
EXOSC1-210ENST00000485122 DDX49Q9Y6V7 483 aaKnown RBP12.32□□□□□ -0.44
EXOSC1-210ENST00000485122 R4GN57 208 aa12.32□□□□□ -0.44
EXOSC1-210ENST00000485122 PDS5AQ29RF7 1337 aaKnown RBP12.32□□□□□ -0.44
EXOSC1-210ENST00000485122 MYO5AQ9Y4I1 1855 aaKnown RBP12.31□□□□□ -0.44
EXOSC1-210ENST00000485122 SCN10AQ9Y5Y9 1956 aa12.31□□□□□ -0.44
EXOSC1-210ENST00000485122 DCDC2BA2VCK2 349 aa12.31□□□□□ -0.44
EXOSC1-210ENST00000485122 DYNC1LI2O43237 492 aaPredicted RBP12.31□□□□□ -0.44
EXOSC1-210ENST00000485122 ALDH1L1O75891 902 aa12.31□□□□□ -0.44
EXOSC1-210ENST00000485122 EYA4O95677 639 aa12.31□□□□□ -0.44
EXOSC1-210ENST00000485122 STAT3P40763 770 aa12.31□□□□□ -0.44
EXOSC1-210ENST00000485122 CALD1Q05682 793 aaKnown RBP12.31□□□□□ -0.44
EXOSC1-210ENST00000485122 ANGPT1Q15389 498 aa12.31□□□□□ -0.44
EXOSC1-210ENST00000485122 CERKLQ49MI3 558 aaPredicted RBP12.31□□□□□ -0.44
EXOSC1-210ENST00000485122 KIAA0319Q5VV43 1072 aa12.31□□□□□ -0.44
EXOSC1-210ENST00000485122 ADGRA1Q86SQ6 560 aa12.31□□□□□ -0.44
EXOSC1-210ENST00000485122 ZBTB33Q86T24 672 aa12.31□□□□□ -0.44
EXOSC1-210ENST00000485122 SMRP1Q8NCR6 262 aa12.31□□□□□ -0.44
EXOSC1-210ENST00000485122 CYP2W1Q8TAV3 490 aa12.31□□□□□ -0.44
EXOSC1-210ENST00000485122 DDX11Q96FC9 970 aa12.31□□□□□ -0.44
EXOSC1-210ENST00000485122 SEZ6LQ9BYH1 1024 aa12.31□□□□□ -0.44
EXOSC1-210ENST00000485122 SRCIN1Q9C0H9 1055 aa12.31□□□□□ -0.44
EXOSC1-210ENST00000485122 ZNF214Q9UL59 606 aaPredicted RBP12.31□□□□□ -0.44
EXOSC1-210ENST00000485122 ADAMTS8Q9UP79 889 aa12.31□□□□□ -0.44
EXOSC1-210ENST00000485122 USP15Q9Y4E8 981 aaPredicted RBP12.31□□□□□ -0.44
EXOSC1-210ENST00000485122 NAV1Q8NEY1 1877 aa12.31□□□□□ -0.44
EXOSC1-210ENST00000485122 ANKRD11Q6UB99 2663 aaPredicted RBP12.31□□□□□ -0.44
EXOSC1-210ENST00000485122 NCK2O43639 380 aa12.3□□□□□ -0.44
EXOSC1-210ENST00000485122 SMPD1P17405 629 aa12.3□□□□□ -0.44
EXOSC1-210ENST00000485122 SP100P23497 879 aaPredicted RBP12.3□□□□□ -0.44
EXOSC1-210ENST00000485122 ASTLQ6HA08 431 aaPredicted RBP12.3□□□□□ -0.44
EXOSC1-210ENST00000485122 CNKSR3Q6P9H4 555 aa12.3□□□□□ -0.44
EXOSC1-210ENST00000485122 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.3□□□□□ -0.44
EXOSC1-210ENST00000485122 CCDC144CPQ8IYA2 1237 aa12.3□□□□□ -0.44
EXOSC1-210ENST00000485122 CLEC1BQ9P126 229 aa12.3□□□□□ -0.44
EXOSC1-210ENST00000485122 INSL6Q9Y581 213 aa12.3□□□□□ -0.44
EXOSC1-210ENST00000485122 APAF1O14727 1248 aa12.29□□□□□ -0.44
EXOSC1-210ENST00000485122 NBNO60934 754 aa12.29□□□□□ -0.44
EXOSC1-210ENST00000485122 SHMT1P34896 483 aa12.29□□□□□ -0.44
EXOSC1-210ENST00000485122 CCDC27Q2M243 656 aa12.29□□□□□ -0.44
EXOSC1-210ENST00000485122 ZNF467Q7Z7K2 595 aaPredicted RBP12.29□□□□□ -0.44
EXOSC1-210ENST00000485122 FBXO11Q86XK2 927 aa12.29□□□□□ -0.44
EXOSC1-210ENST00000485122 TMEM192Q8IY95 271 aa12.29□□□□□ -0.44
EXOSC1-210ENST00000485122 REPS2Q8NFH8 660 aa12.29□□□□□ -0.44
EXOSC1-210ENST00000485122 SP7Q8TDD2 431 aaPredicted RBP12.29□□□□□ -0.44
EXOSC1-210ENST00000485122 NOL10Q9BSC4 688 aaKnown RBP12.29□□□□□ -0.44
EXOSC1-210ENST00000485122 PHF7Q9BWX1 381 aaPredicted RBP12.29□□□□□ -0.44
EXOSC1-210ENST00000485122 AP5M1Q9H0R1 490 aa12.29□□□□□ -0.44
EXOSC1-210ENST00000485122 CABP5Q9NP86 173 aa12.29□□□□□ -0.44
EXOSC1-210ENST00000485122 RIPK3Q9Y572 518 aa12.29□□□□□ -0.44
EXOSC1-210ENST00000485122 MYO10Q9HD67 2058 aa12.28□□□□□ -0.44
EXOSC1-210ENST00000485122 CYSRT1A8MQ03 144 aa12.28□□□□□ -0.44
EXOSC1-210ENST00000485122 E9PSI1 815 aa12.28□□□□□ -0.44
EXOSC1-210ENST00000485122 GRM6O15303 877 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms