RNA–Protein interactions for RNA: ENST00000484184.1

DNMT3A-213, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-213ENST00000484184 CLIP2Q9UDT6 1046 aa15.25■□□□□ 0.03
DNMT3A-213ENST00000484184 FEM1BQ9UK73 627 aa15.25■□□□□ 0.03
DNMT3A-213ENST00000484184 PCDHA11Q9Y5I1 949 aa15.25■□□□□ 0.03
DNMT3A-213ENST00000484184 ZNF536O15090 1300 aa15.24■□□□□ 0.03
DNMT3A-213ENST00000484184 ERC2O15083 957 aa15.24■□□□□ 0.03
DNMT3A-213ENST00000484184 HMMRO75330 724 aa15.24■□□□□ 0.03
DNMT3A-213ENST00000484184 FSCN1Q16658 493 aaKnown RBP15.24■□□□□ 0.03
DNMT3A-213ENST00000484184 TLK2Q86UE8 772 aa15.24■□□□□ 0.03
DNMT3A-213ENST00000484184 STK11IPQ8N1F8 1099 aa15.24■□□□□ 0.03
DNMT3A-213ENST00000484184 IL27Q8NEV9 243 aa15.24■□□□□ 0.03
DNMT3A-213ENST00000484184 CEP95Q96GE4 821 aa15.24■□□□□ 0.03
DNMT3A-213ENST00000484184 SCLYQ96I15 445 aa15.24■□□□□ 0.03
DNMT3A-213ENST00000484184 PDGFCQ9NRA1 345 aa15.24■□□□□ 0.03
DNMT3A-213ENST00000484184 MTCH2Q9Y6C9 303 aa15.24■□□□□ 0.03
DNMT3A-213ENST00000484184 SLC4A7Q9Y6M7 1214 aa15.24■□□□□ 0.03
DNMT3A-213ENST00000484184 SCN5AQ14524 2016 aa15.23■□□□□ 0.03
DNMT3A-213ENST00000484184 RFXAPO00287 272 aa15.23■□□□□ 0.03
DNMT3A-213ENST00000484184 RAB11FIP3O75154 756 aa15.23■□□□□ 0.03
DNMT3A-213ENST00000484184 PSMC6P62333 389 aa15.23■□□□□ 0.03
DNMT3A-213ENST00000484184 TTLL4Q14679 1199 aa15.23■□□□□ 0.03
DNMT3A-213ENST00000484184 TAPT1Q6NXT6 567 aa15.23■□□□□ 0.03
DNMT3A-213ENST00000484184 MICALL1Q8N3F8 863 aa15.23■□□□□ 0.03
DNMT3A-213ENST00000484184 GMCL1P1Q8NEA9 526 aa15.23■□□□□ 0.03
DNMT3A-213ENST00000484184 TSPYL2Q9H2G4 693 aaPredicted RBP15.23■□□□□ 0.03
DNMT3A-213ENST00000484184 EPHX3Q9H6B9 360 aa15.23■□□□□ 0.03
DNMT3A-213ENST00000484184 MKNK2Q9HBH9 465 aa15.23■□□□□ 0.03
DNMT3A-213ENST00000484184 EPB41L4AQ9HCS5 686 aaPredicted RBP15.23■□□□□ 0.03
DNMT3A-213ENST00000484184 HOMER2Q9NSB8 354 aa15.23■□□□□ 0.03
DNMT3A-213ENST00000484184 MTMR4Q9NYA4 1195 aa15.23■□□□□ 0.03
DNMT3A-213ENST00000484184 SYNPO2Q9UMS6 1093 aa15.23■□□□□ 0.03
DNMT3A-213ENST00000484184 TET1Q8NFU7 2136 aa15.23■□□□□ 0.03
DNMT3A-213ENST00000484184 LCTP09848 1927 aa15.23■□□□□ 0.03
DNMT3A-213ENST00000484184 EPOPA6NHQ4 379 aa15.22■□□□□ 0.03
DNMT3A-213ENST00000484184 DYNC1LI2O43237 492 aaPredicted RBP15.22■□□□□ 0.03
DNMT3A-213ENST00000484184 ATP2A2P16615 1042 aaKnown RBP15.22■□□□□ 0.03
DNMT3A-213ENST00000484184 RRP1P56182 461 aaKnown RBP15.22■□□□□ 0.03
DNMT3A-213ENST00000484184 GIMAP6Q6P9H5 292 aa15.22■□□□□ 0.03
DNMT3A-213ENST00000484184 NOL8Q76FK4 1167 aaKnown RBP15.22■□□□□ 0.03
DNMT3A-213ENST00000484184 RPUSD2Q8IZ73 545 aaKnown RBP15.22■□□□□ 0.03
DNMT3A-213ENST00000484184 LRRC47Q8N1G4 583 aaKnown RBP15.22■□□□□ 0.03
DNMT3A-213ENST00000484184 LRFN3Q9BTN0 628 aa15.22■□□□□ 0.03
DNMT3A-213ENST00000484184 SEZ6LQ9BYH1 1024 aa15.22■□□□□ 0.03
DNMT3A-213ENST00000484184 ACAD9Q9H845 621 aa15.22■□□□□ 0.03
DNMT3A-213ENST00000484184 ARIH1Q9Y4X5 557 aaPredicted RBP15.22■□□□□ 0.03
DNMT3A-213ENST00000484184 CTDP1Q9Y5B0 961 aaPredicted RBP15.22■□□□□ 0.03
DNMT3A-213ENST00000484184 ASB14A6NK59 587 aa15.21■□□□□ 0.03
DNMT3A-213ENST00000484184 MINDY4BA8MYZ0 360 aa15.21■□□□□ 0.03
DNMT3A-213ENST00000484184 TLL1O43897 1013 aa15.21■□□□□ 0.03
DNMT3A-213ENST00000484184 ARHGEF15O94989 841 aa15.21■□□□□ 0.03
DNMT3A-213ENST00000484184 CA3P07451 260 aa15.21■□□□□ 0.03
DNMT3A-213ENST00000484184 AAK1Q2M2I8 961 aa15.21■□□□□ 0.03
DNMT3A-213ENST00000484184 KRT40Q6A162 431 aa15.21■□□□□ 0.03
DNMT3A-213ENST00000484184 OSBP2Q969R2 916 aa15.21■□□□□ 0.03
DNMT3A-213ENST00000484184 ALDH8A1Q9H2A2 487 aaPredicted RBP15.21■□□□□ 0.03
DNMT3A-213ENST00000484184 RNF146Q9NTX7 359 aa15.21■□□□□ 0.03
DNMT3A-213ENST00000484184 Q9Y3F1 56 aa15.21■□□□□ 0.03
DNMT3A-213ENST00000484184 PRDM1O75626 825 aa15.2■□□□□ 0.02
DNMT3A-213ENST00000484184 FDX1P10109 184 aa15.2■□□□□ 0.02
DNMT3A-213ENST00000484184 BMP3P12645 472 aa15.2■□□□□ 0.02
DNMT3A-213ENST00000484184 TMEM67Q5HYA8 995 aa15.2■□□□□ 0.02
DNMT3A-213ENST00000484184 SLFN13Q68D06 897 aa15.2■□□□□ 0.02
DNMT3A-213ENST00000484184 IQSEC1Q6DN90 963 aa15.2■□□□□ 0.02
DNMT3A-213ENST00000484184 ZSCAN25Q6NSZ9 544 aa15.2■□□□□ 0.02
DNMT3A-213ENST00000484184 MORC4Q8TE76 937 aa15.2■□□□□ 0.02
DNMT3A-213ENST00000484184 KHSRPQ92945 711 aaKnown RBP eCLIP15.2■□□□□ 0.02
DNMT3A-213ENST00000484184 AP5M1Q9H0R1 490 aa15.2■□□□□ 0.02
DNMT3A-213ENST00000484184 TRMT13Q9NUP7 481 aaKnown RBP15.2■□□□□ 0.02
DNMT3A-213ENST00000484184 SCN10AQ9Y5Y9 1956 aa15.2■□□□□ 0.02
DNMT3A-213ENST00000484184 ZBBXA8MT70 800 aa15.19■□□□□ 0.02
DNMT3A-213ENST00000484184 TMEM232C9JQI7 657 aa15.19■□□□□ 0.02
DNMT3A-213ENST00000484184 TTLL1O95922 423 aa15.19■□□□□ 0.02
DNMT3A-213ENST00000484184 PFKMP08237 780 aa15.19■□□□□ 0.02
DNMT3A-213ENST00000484184 CYP2C9P11712 490 aa15.19■□□□□ 0.02
DNMT3A-213ENST00000484184 EEPD1Q7L9B9 569 aa15.19■□□□□ 0.02
DNMT3A-213ENST00000484184 FBXO16Q8IX29 292 aaPredicted RBP15.19■□□□□ 0.02
DNMT3A-213ENST00000484184 PURBQ96QR8 312 aaKnown RBP15.19■□□□□ 0.02
DNMT3A-213ENST00000484184 CERS4Q9HA82 394 aa15.19■□□□□ 0.02
DNMT3A-213ENST00000484184 C11orf16Q9NQ32 467 aa15.19■□□□□ 0.02
DNMT3A-213ENST00000484184 CYP39A1Q9NYL5 469 aa15.19■□□□□ 0.02
DNMT3A-213ENST00000484184 PLIN4Q96Q06 1357 aa15.19■□□□□ 0.02
DNMT3A-213ENST00000484184 ZEB2O60315 1214 aa15.18■□□□□ 0.02
DNMT3A-213ENST00000484184 STAT2P52630 851 aa15.18■□□□□ 0.02
DNMT3A-213ENST00000484184 TAP1Q03518 808 aa15.18■□□□□ 0.02
DNMT3A-213ENST00000484184 SKIV2LQ15477 1246 aaKnown RBP15.18■□□□□ 0.02
DNMT3A-213ENST00000484184 TKFCQ3LXA3 575 aa15.18■□□□□ 0.02
DNMT3A-213ENST00000484184 MUM1L1Q5H9M0 696 aa15.18■□□□□ 0.02
DNMT3A-213ENST00000484184 ZNF444Q8N0Y2 327 aaPredicted RBP15.18■□□□□ 0.02
DNMT3A-213ENST00000484184 NEDD1Q8NHV4 660 aa15.18■□□□□ 0.02
DNMT3A-213ENST00000484184 GMCL1Q96IK5 515 aa15.18■□□□□ 0.02
DNMT3A-213ENST00000484184 TRERF1Q96PN7 1200 aa15.18■□□□□ 0.02
DNMT3A-213ENST00000484184 COG5Q9UP83 839 aa15.18■□□□□ 0.02
DNMT3A-213ENST00000484184 TNKSO95271 1327 aa15.17■□□□□ 0.02
DNMT3A-213ENST00000484184 LPXNO60711 386 aa15.17■□□□□ 0.02
DNMT3A-213ENST00000484184 PLA2G6O60733 806 aa15.17■□□□□ 0.02
DNMT3A-213ENST00000484184 PURAQ00577 322 aaKnown RBP15.17■□□□□ 0.02
DNMT3A-213ENST00000484184 DUSP28Q4G0W2 176 aa15.17■□□□□ 0.02
DNMT3A-213ENST00000484184 SPRED2Q7Z698 418 aa15.17■□□□□ 0.02
DNMT3A-213ENST00000484184 DEFB128Q7Z7B8 93 aa15.17■□□□□ 0.02
DNMT3A-213ENST00000484184 KBTBD3Q8NAB2 608 aa15.17■□□□□ 0.02
DNMT3A-213ENST00000484184 STAG1Q8WVM7 1258 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms