RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 COA7Q96BR5 231 aa8.05□□□□□ -1.12
BRCA1-216ENST00000484087 ZNF274Q96GC6 653 aaPredicted RBP8.05□□□□□ -1.12
BRCA1-216ENST00000484087 AGXT2Q9BYV1 514 aa8.05□□□□□ -1.12
BRCA1-216ENST00000484087 KRT23Q9C075 422 aa8.05□□□□□ -1.12
BRCA1-216ENST00000484087 RNF41Q9H4P4 317 aaPredicted RBP8.05□□□□□ -1.12
BRCA1-216ENST00000484087 PDE4DIPQ5VU43 2346 aa8.04□□□□□ -1.12
BRCA1-216ENST00000484087 FRMPD2Q68DX3 1309 aaPredicted RBP8.04□□□□□ -1.12
BRCA1-216ENST00000484087 B4E1Z4 1266 aa8.04□□□□□ -1.12
BRCA1-216ENST00000484087 PRC1O43663 620 aa8.04□□□□□ -1.12
BRCA1-216ENST00000484087 PFKFB2O60825 505 aa8.04□□□□□ -1.12
BRCA1-216ENST00000484087 TTLL1O95922 423 aa8.04□□□□□ -1.12
BRCA1-216ENST00000484087 ERCC3P19447 782 aa8.04□□□□□ -1.12
BRCA1-216ENST00000484087 HOXD10P28358 340 aa8.04□□□□□ -1.12
BRCA1-216ENST00000484087 MLLT1Q03111 559 aaPredicted RBP8.04□□□□□ -1.12
BRCA1-216ENST00000484087 COG2Q14746 738 aa8.04□□□□□ -1.12
BRCA1-216ENST00000484087 SART3Q15020 963 aaKnown RBP8.04□□□□□ -1.12
BRCA1-216ENST00000484087 SLFN13Q68D06 897 aa8.04□□□□□ -1.12
BRCA1-216ENST00000484087 MFSD6Q6ZSS7 791 aa8.04□□□□□ -1.12
BRCA1-216ENST00000484087 NCAPG2Q86XI2 1143 aa8.04□□□□□ -1.12
BRCA1-216ENST00000484087 CCAR1Q8IX12 1150 aaKnown RBP8.04□□□□□ -1.12
BRCA1-216ENST00000484087 FBXO22Q8NEZ5 403 aa8.04□□□□□ -1.12
BRCA1-216ENST00000484087 NPLOC4Q8TAT6 608 aa8.04□□□□□ -1.12
BRCA1-216ENST00000484087 KIFC2Q96AC6 838 aa8.04□□□□□ -1.12
BRCA1-216ENST00000484087 TMEM87BQ96K49 555 aa8.04□□□□□ -1.12
BRCA1-216ENST00000484087 LRRC2Q9BYS8 371 aa8.04□□□□□ -1.12
BRCA1-216ENST00000484087 SPATC1LQ9H0A9 340 aa8.04□□□□□ -1.12
BRCA1-216ENST00000484087 RNF208Q9H0X6 261 aa8.04□□□□□ -1.12
BRCA1-216ENST00000484087 CPVLQ9H3G5 476 aa8.04□□□□□ -1.12
BRCA1-216ENST00000484087 SH2D4AQ9H788 454 aa8.04□□□□□ -1.12
BRCA1-216ENST00000484087 GOPCQ9HD26 462 aa8.04□□□□□ -1.12
BRCA1-216ENST00000484087 NYAP2Q9P242 653 aa8.04□□□□□ -1.12
BRCA1-216ENST00000484087 ANAPC4Q9UJX5 808 aa8.04□□□□□ -1.12
BRCA1-216ENST00000484087 ZDHHC9Q9Y397 364 aa8.04□□□□□ -1.12
BRCA1-216ENST00000484087 RABGAP1Q9Y3P9 1069 aa8.04□□□□□ -1.12
BRCA1-216ENST00000484087 RIPK3Q9Y572 518 aa8.04□□□□□ -1.12
BRCA1-216ENST00000484087 DDX49Q9Y6V7 483 aaKnown RBP8.04□□□□□ -1.12
BRCA1-216ENST00000484087 VPS37CA5D8V6 355 aaPredicted RBP8.03□□□□□ -1.12
BRCA1-216ENST00000484087 H3BQV1 296 aa8.03□□□□□ -1.12
BRCA1-216ENST00000484087 KDM4AO75164 1064 aa8.03□□□□□ -1.12
BRCA1-216ENST00000484087 MBD3O95983 291 aa8.03□□□□□ -1.12
BRCA1-216ENST00000484087 F13A1P00488 732 aa8.03□□□□□ -1.12
BRCA1-216ENST00000484087 PGK2P07205 417 aa8.03□□□□□ -1.12
BRCA1-216ENST00000484087 SLC3A2P08195 630 aaKnown RBP8.03□□□□□ -1.12
BRCA1-216ENST00000484087 CCND3P30281 292 aaPredicted RBP8.03□□□□□ -1.12
BRCA1-216ENST00000484087 SLC16A2P36021 539 aa8.03□□□□□ -1.12
BRCA1-216ENST00000484087 RGS19P49795 217 aa8.03□□□□□ -1.12
BRCA1-216ENST00000484087 APOBRQ0VD83 1088 aa8.03□□□□□ -1.12
BRCA1-216ENST00000484087 ARHGEF6Q15052 776 aa8.03□□□□□ -1.12
BRCA1-216ENST00000484087 KLHL40Q2TBA0 621 aa8.03□□□□□ -1.12
BRCA1-216ENST00000484087 MORN1Q5T089 497 aa8.03□□□□□ -1.12
BRCA1-216ENST00000484087 AKNAD1Q5T1N1 836 aa8.03□□□□□ -1.12
BRCA1-216ENST00000484087 ANO1Q5XXA6 986 aa8.03□□□□□ -1.12
BRCA1-216ENST00000484087 TTBK2Q6IQ55 1244 aa8.03□□□□□ -1.12
BRCA1-216ENST00000484087 CPLX2Q6PUV4 134 aaKnown RBP8.03□□□□□ -1.12
BRCA1-216ENST00000484087 SYNE3Q6ZMZ3 975 aa8.03□□□□□ -1.12
BRCA1-216ENST00000484087 PLEKHH3Q7Z736 793 aa8.03□□□□□ -1.12
BRCA1-216ENST00000484087 MB21D2Q8IYB1 491 aaPredicted RBP8.03□□□□□ -1.12
BRCA1-216ENST00000484087 CPXCR1Q8N123 301 aa8.03□□□□□ -1.12
BRCA1-216ENST00000484087 REPS2Q8NFH8 660 aa8.03□□□□□ -1.12
BRCA1-216ENST00000484087 STAG1Q8WVM7 1258 aa8.03□□□□□ -1.12
BRCA1-216ENST00000484087 LPAR1Q92633 364 aa8.03□□□□□ -1.12
BRCA1-216ENST00000484087 SLC24A3Q9HC58 644 aa8.03□□□□□ -1.12
BRCA1-216ENST00000484087 RAVER2Q9HCJ3 691 aaKnown RBP8.03□□□□□ -1.12
BRCA1-216ENST00000484087 HOMER2Q9NSB8 354 aa8.03□□□□□ -1.12
BRCA1-216ENST00000484087 ZNF214Q9UL59 606 aaPredicted RBP8.03□□□□□ -1.12
BRCA1-216ENST00000484087 PPP1R9AQ9ULJ8 1098 aa8.03□□□□□ -1.12
BRCA1-216ENST00000484087 MYH6P13533 1939 aa8.03□□□□□ -1.12
BRCA1-216ENST00000484087 LRRC37A2A6NM11 1700 aa8.02□□□□□ -1.12
BRCA1-216ENST00000484087 ERICH2A1L162 156 aa8.02□□□□□ -1.13
BRCA1-216ENST00000484087 TMEM232C9JQI7 657 aa8.02□□□□□ -1.13
BRCA1-216ENST00000484087 VWA5AO00534 786 aa8.02□□□□□ -1.13
BRCA1-216ENST00000484087 CPLX1O14810 134 aa8.02□□□□□ -1.13
BRCA1-216ENST00000484087 ORC4O43929 436 aa8.02□□□□□ -1.13
BRCA1-216ENST00000484087 COBLO75128 1261 aa8.02□□□□□ -1.13
BRCA1-216ENST00000484087 PRPF40AO75400 957 aaKnown RBP8.02□□□□□ -1.13
BRCA1-216ENST00000484087 GNRH1P01148 92 aa8.02□□□□□ -1.13
BRCA1-216ENST00000484087 GOLGA8HP0CJ92 632 aa8.02□□□□□ -1.13
BRCA1-216ENST00000484087 PCP11498 1178 aaKnown RBP8.02□□□□□ -1.13
BRCA1-216ENST00000484087 ADORA2AP29274 412 aa8.02□□□□□ -1.13
BRCA1-216ENST00000484087 MAPK4P31152 587 aa8.02□□□□□ -1.13
BRCA1-216ENST00000484087 CYP2C19P33261 490 aa8.02□□□□□ -1.13
BRCA1-216ENST00000484087 PRMT2P55345 433 aa8.02□□□□□ -1.13
BRCA1-216ENST00000484087 EVCP57679 992 aa8.02□□□□□ -1.13
BRCA1-216ENST00000484087 SCRN1Q12765 414 aa8.02□□□□□ -1.13
BRCA1-216ENST00000484087 IKQ13123 557 aaPredicted RBP8.02□□□□□ -1.13
BRCA1-216ENST00000484087 IRF5Q13568 498 aa8.02□□□□□ -1.13
BRCA1-216ENST00000484087 CCDC96Q2M329 555 aa8.02□□□□□ -1.13
BRCA1-216ENST00000484087 L1TD1Q5T7N2 865 aaKnown RBP8.02□□□□□ -1.13
BRCA1-216ENST00000484087 SNRNP48Q6IEG0 339 aaKnown RBP8.02□□□□□ -1.13
BRCA1-216ENST00000484087 RCSD1Q6JBY9 416 aa8.02□□□□□ -1.13
BRCA1-216ENST00000484087 CCDC174Q6PII3 467 aa8.02□□□□□ -1.13
BRCA1-216ENST00000484087 CYB5R4Q7L1T6 521 aa8.02□□□□□ -1.13
BRCA1-216ENST00000484087 CHST3Q7LGC8 479 aa8.02□□□□□ -1.13
BRCA1-216ENST00000484087 NBPF11Q86T75 865 aa8.02□□□□□ -1.13
BRCA1-216ENST00000484087 HOMEZQ8IX15 550 aa8.02□□□□□ -1.13
BRCA1-216ENST00000484087 DIS3LQ8TF46 1054 aaKnown RBP8.02□□□□□ -1.13
BRCA1-216ENST00000484087 USP6NLQ92738 828 aa8.02□□□□□ -1.13
BRCA1-216ENST00000484087 DEFB118Q96PH6 123 aa8.02□□□□□ -1.13
BRCA1-216ENST00000484087 NUDT12Q9BQG2 462 aa8.02□□□□□ -1.13
BRCA1-216ENST00000484087 SLF1Q9BQI6 1058 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms