RNA–Protein interactions for RNA: ENST00000483656.5

HDAC6-226, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-226ENST00000483656 USP17L13C9JLJ4 530 aa11.54□□□□□ -0.56
HDAC6-226ENST00000483656 USP17L11C9JVI0 530 aa11.54□□□□□ -0.56
HDAC6-226ENST00000483656 USP17L18D6R9N7 530 aa11.54□□□□□ -0.56
HDAC6-226ENST00000483656 USP17L22D6RA61 530 aa11.54□□□□□ -0.56
HDAC6-226ENST00000483656 USP17L17D6RBQ6 530 aa11.54□□□□□ -0.56
HDAC6-226ENST00000483656 USP17L19D6RCP7 530 aa11.54□□□□□ -0.56
HDAC6-226ENST00000483656 USP17L20D6RJB6 530 aa11.54□□□□□ -0.56
HDAC6-226ENST00000483656 MEIS2O14770 477 aa11.54□□□□□ -0.56
HDAC6-226ENST00000483656 PTPREP23469 700 aa11.54□□□□□ -0.56
HDAC6-226ENST00000483656 MRPL12P52815 198 aaKnown RBP11.54□□□□□ -0.56
HDAC6-226ENST00000483656 GRIN1Q05586 938 aa11.54□□□□□ -0.56
HDAC6-226ENST00000483656 PPATQ06203 517 aa11.54□□□□□ -0.56
HDAC6-226ENST00000483656 USP17L24Q0WX57 530 aa11.54□□□□□ -0.56
HDAC6-226ENST00000483656 TTLL12Q14166 644 aaPredicted RBP11.54□□□□□ -0.56
HDAC6-226ENST00000483656 NONOQ15233 471 aaKnown RBP eCLIP11.54□□□□□ -0.56
HDAC6-226ENST00000483656 USP17L6PQ6QN14 398 aa11.54□□□□□ -0.56
HDAC6-226ENST00000483656 LDHDQ86WU2 507 aa11.54□□□□□ -0.56
HDAC6-226ENST00000483656 CCAR1Q8IX12 1150 aaKnown RBP11.54□□□□□ -0.56
HDAC6-226ENST00000483656 TNS4Q8IZW8 715 aa11.54□□□□□ -0.56
HDAC6-226ENST00000483656 ENGASEQ8NFI3 743 aa11.54□□□□□ -0.56
HDAC6-226ENST00000483656 TBC1D5Q92609 795 aa11.54□□□□□ -0.56
HDAC6-226ENST00000483656 CUL5Q93034 780 aa11.54□□□□□ -0.56
HDAC6-226ENST00000483656 CLIC6Q96NY7 704 aa11.54□□□□□ -0.56
HDAC6-226ENST00000483656 TANGO6Q9C0B7 1094 aa11.54□□□□□ -0.56
HDAC6-226ENST00000483656 SLC38A10Q9HBR0 1119 aa11.54□□□□□ -0.56
HDAC6-226ENST00000483656 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.54□□□□□ -0.56
HDAC6-226ENST00000483656 RLFQ13129 1914 aa11.54□□□□□ -0.56
HDAC6-226ENST00000483656 GOLGA6L4A6NEF3 574 aa11.53□□□□□ -0.56
HDAC6-226ENST00000483656 IRF6O14896 467 aa11.53□□□□□ -0.56
HDAC6-226ENST00000483656 CUTAO60888 179 aa11.53□□□□□ -0.56
HDAC6-226ENST00000483656 FLOT1O75955 427 aa11.53□□□□□ -0.56
HDAC6-226ENST00000483656 DSG3P32926 999 aa11.53□□□□□ -0.56
HDAC6-226ENST00000483656 GJA5P36382 358 aa11.53□□□□□ -0.56
HDAC6-226ENST00000483656 COL13A1Q5TAT6 717 aaPredicted RBP11.53□□□□□ -0.56
HDAC6-226ENST00000483656 SHC4Q6S5L8 630 aa11.53□□□□□ -0.56
HDAC6-226ENST00000483656 SAMD1Q6SPF0 538 aaPredicted RBP11.53□□□□□ -0.56
HDAC6-226ENST00000483656 CATSPERGQ6ZRH7 1159 aa11.53□□□□□ -0.56
HDAC6-226ENST00000483656 ARMC9Q7Z3E5 817 aa11.53□□□□□ -0.56
HDAC6-226ENST00000483656 ERO1BQ86YB8 467 aa11.53□□□□□ -0.56
HDAC6-226ENST00000483656 REPS2Q8NFH8 660 aa11.53□□□□□ -0.56
HDAC6-226ENST00000483656 RBM46Q8TBY0 533 aaKnown RBP11.53□□□□□ -0.56
HDAC6-226ENST00000483656 TBCKQ8TEA7 893 aa11.53□□□□□ -0.56
HDAC6-226ENST00000483656 ATG4CQ96DT6 458 aa11.53□□□□□ -0.56
HDAC6-226ENST00000483656 WNK4Q96J92 1243 aa11.53□□□□□ -0.56
HDAC6-226ENST00000483656 AGBL1Q96MI9 1066 aa11.53□□□□□ -0.56
HDAC6-226ENST00000483656 ADAMTS5Q9UNA0 930 aa11.53□□□□□ -0.56
HDAC6-226ENST00000483656 KCNH4Q9UQ05 1017 aa11.53□□□□□ -0.56
HDAC6-226ENST00000483656 SRPRBQ9Y5M8 271 aaKnown RBP11.53□□□□□ -0.56
HDAC6-226ENST00000483656 PARP14Q460N5 1801 aa11.53□□□□□ -0.56
HDAC6-226ENST00000483656 A0A0G2JLL6 359 aaPredicted RBP11.52□□□□□ -0.57
HDAC6-226ENST00000483656 FAM237AA0A1B0GTK4 181 aa11.52□□□□□ -0.57
HDAC6-226ENST00000483656 CXCL11O14625 94 aa11.52□□□□□ -0.57
HDAC6-226ENST00000483656 NR1I2O75469 434 aa11.52□□□□□ -0.57
HDAC6-226ENST00000483656 ICAM1P05362 532 aa11.52□□□□□ -0.57
HDAC6-226ENST00000483656 CMA1P23946 247 aa11.52□□□□□ -0.57
HDAC6-226ENST00000483656 MCM7P33993 719 aa11.52□□□□□ -0.57
HDAC6-226ENST00000483656 ATP2C1P98194 919 aaPredicted RBP11.52□□□□□ -0.57
HDAC6-226ENST00000483656 PTGDRQ13258 359 aa11.52□□□□□ -0.57
HDAC6-226ENST00000483656 PPIL2Q13356 520 aa11.52□□□□□ -0.57
HDAC6-226ENST00000483656 SNW1Q13573 536 aaKnown RBP11.52□□□□□ -0.57
HDAC6-226ENST00000483656 MOGSQ13724 837 aa11.52□□□□□ -0.57
HDAC6-226ENST00000483656 IL17AQ16552 155 aa11.52□□□□□ -0.57
HDAC6-226ENST00000483656 ZSCAN23Q3MJ62 389 aa11.52□□□□□ -0.57
HDAC6-226ENST00000483656 TREML2Q5T2D2 321 aa11.52□□□□□ -0.57
HDAC6-226ENST00000483656 PRRT2Q7Z6L0 340 aaPredicted RBP11.52□□□□□ -0.57
HDAC6-226ENST00000483656 KRI1Q8N9T8 703 aaKnown RBP11.52□□□□□ -0.57
HDAC6-226ENST00000483656 FSIP1Q8NA03 581 aa11.52□□□□□ -0.57
HDAC6-226ENST00000483656 ZNF526Q8TF50 670 aaPredicted RBP11.52□□□□□ -0.57
HDAC6-226ENST00000483656 CLEC4DQ8WXI8 215 aa11.52□□□□□ -0.57
HDAC6-226ENST00000483656 OTUD5Q96G74 571 aa11.52□□□□□ -0.57
HDAC6-226ENST00000483656 GLT8D2Q9H1C3 349 aa11.52□□□□□ -0.57
HDAC6-226ENST00000483656 TMEM60Q9H2L4 133 aa11.52□□□□□ -0.57
HDAC6-226ENST00000483656 RAVER2Q9HCJ3 691 aaKnown RBP11.52□□□□□ -0.57
HDAC6-226ENST00000483656 DACT1Q9NYF0 836 aa11.52□□□□□ -0.57
HDAC6-226ENST00000483656 TMOD4Q9NZQ9 345 aa11.52□□□□□ -0.57
HDAC6-226ENST00000483656 CEP131Q9UPN4 1083 aa11.52□□□□□ -0.57
HDAC6-226ENST00000483656 ABCB11O95342 1321 aa11.52□□□□□ -0.57
HDAC6-226ENST00000483656 PTPRFP10586 1907 aa11.52□□□□□ -0.57
HDAC6-226ENST00000483656 A0A1B0GVL5 298 aa11.51□□□□□ -0.57
HDAC6-226ENST00000483656 PIK3CDO00329 1044 aa11.51□□□□□ -0.57
HDAC6-226ENST00000483656 VWA5AO00534 786 aa11.51□□□□□ -0.57
HDAC6-226ENST00000483656 ITGBL1O95965 494 aaPredicted RBP11.51□□□□□ -0.57
HDAC6-226ENST00000483656 BMP15O95972 392 aa11.51□□□□□ -0.57
HDAC6-226ENST00000483656 NDUFA8P51970 172 aa11.51□□□□□ -0.57
HDAC6-226ENST00000483656 TRAF1Q13077 416 aa11.51□□□□□ -0.57
HDAC6-226ENST00000483656 COG2Q14746 738 aa11.51□□□□□ -0.57
HDAC6-226ENST00000483656 RESP18Q5W5W9 173 aa11.51□□□□□ -0.57
HDAC6-226ENST00000483656 POTEEQ6S8J3 1075 aa11.51□□□□□ -0.57
HDAC6-226ENST00000483656 NEK8Q86SG6 692 aa11.51□□□□□ -0.57
HDAC6-226ENST00000483656 FMR1NBQ8N0W7 255 aaPredicted RBP11.51□□□□□ -0.57
HDAC6-226ENST00000483656 JMYQ8N9B5 988 aa11.51□□□□□ -0.57
HDAC6-226ENST00000483656 CRYGNQ8WXF5 182 aa11.51□□□□□ -0.57
HDAC6-226ENST00000483656 MRPS27Q92552 414 aaKnown RBP11.51□□□□□ -0.57
HDAC6-226ENST00000483656 OPTNQ96CV9 577 aa11.51□□□□□ -0.57
HDAC6-226ENST00000483656 ZNF408Q9H9D4 720 aa11.51□□□□□ -0.57
HDAC6-226ENST00000483656 HPSEQ9Y251 543 aa11.51□□□□□ -0.57
HDAC6-226ENST00000483656 MRPL11Q9Y3B7 192 aaKnown RBP11.51□□□□□ -0.57
HDAC6-226ENST00000483656 LOC285556D6RIA3 1793 aa11.5□□□□□ -0.57
HDAC6-226ENST00000483656 UNCXA6NJT0 531 aa11.5□□□□□ -0.57
HDAC6-226ENST00000483656 ZBED4O75132 1171 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms