RNA–Protein interactions for RNA: ENST00000483415.5

EWSR1-217, Transcript of EWS RNA binding protein 1, humanhuman

TSL 1 (best)

Gene EWSR1, Length 3,231 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-217ENST00000483415 PROCA1Q8NCQ7 364 aaPredicted RBP12.24□□□□□ -0.45
EWSR1-217ENST00000483415 ZSCAN16Q9H4T2 348 aaPredicted RBP12.24□□□□□ -0.45
EWSR1-217ENST00000483415 CEP83Q9Y592 693 aa12.24□□□□□ -0.45
EWSR1-217ENST00000483415 CCDC172P0C7W6 258 aa12.24□□□□□ -0.45
EWSR1-217ENST00000483415 SSRP1Q08945 709 aaKnown RBP12.24□□□□□ -0.45
EWSR1-217ENST00000483415 PPIL2Q13356 520 aa12.24□□□□□ -0.45
EWSR1-217ENST00000483415 E4F1Q66K89 784 aaPredicted RBP12.24□□□□□ -0.45
EWSR1-217ENST00000483415 KRT26Q7Z3Y9 468 aa12.24□□□□□ -0.45
EWSR1-217ENST00000483415 NKX2-3Q8TAU0 364 aa12.24□□□□□ -0.45
EWSR1-217ENST00000483415 CCDC12Q8WUD4 166 aaPredicted RBP12.24□□□□□ -0.45
EWSR1-217ENST00000483415 CLSTN2Q9H4D0 955 aa12.24□□□□□ -0.45
EWSR1-217ENST00000483415 MAP3K20Q9NYL2 800 aaKnown RBP12.24□□□□□ -0.45
EWSR1-217ENST00000483415 FEM1BQ9UK73 627 aa12.24□□□□□ -0.45
EWSR1-217ENST00000483415 SPDYE5A6NIY4 337 aa12.24□□□□□ -0.45
EWSR1-217ENST00000483415 XBP1P17861 261 aa12.24□□□□□ -0.45
EWSR1-217ENST00000483415 ZNF165P49910 485 aa12.24□□□□□ -0.45
EWSR1-217ENST00000483415 OAZ1P54368 228 aa12.24□□□□□ -0.45
EWSR1-217ENST00000483415 FSTL1Q12841 308 aa12.24□□□□□ -0.45
EWSR1-217ENST00000483415 TTC31Q49AM3 519 aaPredicted RBP12.24□□□□□ -0.45
EWSR1-217ENST00000483415 SWT1Q5T5J6 900 aaKnown RBP12.24□□□□□ -0.45
EWSR1-217ENST00000483415 NBPF12Q5TAG4 269 aaPredicted RBP12.24□□□□□ -0.45
EWSR1-217ENST00000483415 SUGP1Q8IWZ8 645 aaKnown RBP12.24□□□□□ -0.45
EWSR1-217ENST00000483415 RPS6KA5O75582 802 aa12.23□□□□□ -0.45
EWSR1-217ENST00000483415 EEF2P13639 858 aaKnown RBP12.23□□□□□ -0.45
EWSR1-217ENST00000483415 ACTN2P35609 894 aa12.23□□□□□ -0.45
EWSR1-217ENST00000483415 SMC1AQ14683 1233 aaKnown RBP12.23□□□□□ -0.45
EWSR1-217ENST00000483415 DRC1Q96MC2 740 aa12.23□□□□□ -0.45
EWSR1-217ENST00000483415 TNMDQ9H2S6 317 aa12.23□□□□□ -0.45
EWSR1-217ENST00000483415 PASKQ96RG2 1323 aa12.23□□□□□ -0.45
EWSR1-217ENST00000483415 PTPDC1A2A3K4 754 aa12.23□□□□□ -0.45
EWSR1-217ENST00000483415 PRDM1O75626 825 aa12.23□□□□□ -0.45
EWSR1-217ENST00000483415 SNW1Q13573 536 aaKnown RBP12.23□□□□□ -0.45
EWSR1-217ENST00000483415 PFKFB3Q16875 520 aaPredicted RBP12.23□□□□□ -0.45
EWSR1-217ENST00000483415 ERO1BQ86YB8 467 aa12.23□□□□□ -0.45
EWSR1-217ENST00000483415 REM2Q8IYK8 340 aaPredicted RBP12.23□□□□□ -0.45
EWSR1-217ENST00000483415 PPP1R13BQ96KQ4 1090 aa12.23□□□□□ -0.45
EWSR1-217ENST00000483415 DNAJC25Q9H1X3 360 aa12.23□□□□□ -0.45
EWSR1-217ENST00000483415 DACT1Q9NYF0 836 aa12.23□□□□□ -0.45
EWSR1-217ENST00000483415 COL11A1P12107 1806 aaPredicted RBP12.23□□□□□ -0.45
EWSR1-217ENST00000483415 CPLX1O14810 134 aa12.22□□□□□ -0.45
EWSR1-217ENST00000483415 TADA3O75528 432 aa12.22□□□□□ -0.45
EWSR1-217ENST00000483415 GH2P01242 217 aa12.22□□□□□ -0.45
EWSR1-217ENST00000483415 PTPRAP18433 802 aa12.22□□□□□ -0.45
EWSR1-217ENST00000483415 EVX2Q03828 476 aa12.22□□□□□ -0.45
EWSR1-217ENST00000483415 CCDC83Q8IWF9 413 aa12.22□□□□□ -0.45
EWSR1-217ENST00000483415 GOLGA6L1Q8N7Z2 621 aa12.22□□□□□ -0.45
EWSR1-217ENST00000483415 CHURC1Q8WUH1 139 aa12.22□□□□□ -0.45
EWSR1-217ENST00000483415 INCENPQ9NQS7 918 aa12.22□□□□□ -0.45
EWSR1-217ENST00000483415 PICK1Q9NRD5 415 aa12.22□□□□□ -0.45
EWSR1-217ENST00000483415 ADAM21Q9UKJ8 722 aa12.22□□□□□ -0.45
EWSR1-217ENST00000483415 AFG3L2Q9Y4W6 797 aa12.22□□□□□ -0.45
EWSR1-217ENST00000483415 IRF6O14896 467 aa12.22□□□□□ -0.45
EWSR1-217ENST00000483415 ATP2A1O14983 1001 aa12.22□□□□□ -0.45
EWSR1-217ENST00000483415 COPB2P35606 906 aa12.22□□□□□ -0.45
EWSR1-217ENST00000483415 COL9A3Q14050 684 aaPredicted RBP12.22□□□□□ -0.45
EWSR1-217ENST00000483415 RRP1BQ14684 758 aaKnown RBP12.22□□□□□ -0.45
EWSR1-217ENST00000483415 CC2D1AQ6P1N0 951 aaPredicted RBP12.22□□□□□ -0.45
EWSR1-217ENST00000483415 CCDC148Q8NFR7 591 aa12.22□□□□□ -0.45
EWSR1-217ENST00000483415 ARGLU1Q9NWB6 273 aaPredicted RBP12.22□□□□□ -0.45
EWSR1-217ENST00000483415 ZBTB48P10074 688 aaPredicted RBP12.22□□□□□ -0.45
EWSR1-217ENST00000483415 SEPT2Q15019 361 aa12.22□□□□□ -0.45
EWSR1-217ENST00000483415 BCCIPQ9P287 314 aaKnown RBP eCLIP12.22□□□□□ -0.45
EWSR1-217ENST00000483415 SNCAIPQ9Y6H5 919 aa12.22□□□□□ -0.45
EWSR1-217ENST00000483415 CPP00450 1065 aa12.21□□□□□ -0.45
EWSR1-217ENST00000483415 CALML3P27482 149 aa12.21□□□□□ -0.45
EWSR1-217ENST00000483415 GJB2P29033 226 aa12.21□□□□□ -0.45
EWSR1-217ENST00000483415 CDC27P30260 824 aa12.21□□□□□ -0.45
EWSR1-217ENST00000483415 TKFCQ3LXA3 575 aa12.21□□□□□ -0.45
EWSR1-217ENST00000483415 BRAPQ7Z569 592 aa12.21□□□□□ -0.45
EWSR1-217ENST00000483415 ZNF280CQ8ND82 737 aa12.21□□□□□ -0.45
EWSR1-217ENST00000483415 DONSONQ9NYP3 566 aa12.21□□□□□ -0.45
EWSR1-217ENST00000483415 ADAMTS5Q9UNA0 930 aa12.21□□□□□ -0.45
EWSR1-217ENST00000483415 CSADQ9Y600 493 aa12.21□□□□□ -0.45
EWSR1-217ENST00000483415 ASTN2O75129 1339 aaPredicted RBP12.21□□□□□ -0.45
EWSR1-217ENST00000483415 USP17L10C9JJH3 530 aa12.21□□□□□ -0.46
EWSR1-217ENST00000483415 SMIM22K7EJ46 135 aa12.21□□□□□ -0.46
EWSR1-217ENST00000483415 FANCGO15287 622 aa12.21□□□□□ -0.46
EWSR1-217ENST00000483415 HOXA7P31268 230 aaPredicted RBP12.21□□□□□ -0.46
EWSR1-217ENST00000483415 SLFN13Q68D06 897 aa12.21□□□□□ -0.46
EWSR1-217ENST00000483415 BANK1Q8NDB2 785 aa12.21□□□□□ -0.46
EWSR1-217ENST00000483415 DDX19AQ9NUU7 478 aaKnown RBP12.21□□□□□ -0.46
EWSR1-217ENST00000483415 TESPA1A2RU30 521 aaPredicted RBP12.2□□□□□ -0.46
EWSR1-217ENST00000483415 CAVIN2O95810 425 aa12.2□□□□□ -0.46
EWSR1-217ENST00000483415 BMP3P12645 472 aa12.2□□□□□ -0.46
EWSR1-217ENST00000483415 BACE1P56817 501 aa12.2□□□□□ -0.46
EWSR1-217ENST00000483415 RANBP17Q9H2T7 1088 aaKnown RBP12.2□□□□□ -0.46
EWSR1-217ENST00000483415 FOXP1Q9H334 677 aaPredicted RBP12.2□□□□□ -0.46
EWSR1-217ENST00000483415 A0A0G2JLL6 359 aaPredicted RBP12.2□□□□□ -0.46
EWSR1-217ENST00000483415 H3BQF6 201 aa12.2□□□□□ -0.46
EWSR1-217ENST00000483415 FDPSP14324 419 aaKnown RBP12.2□□□□□ -0.46
EWSR1-217ENST00000483415 KCNJ6P48051 423 aa12.2□□□□□ -0.46
EWSR1-217ENST00000483415 CHST3Q7LGC8 479 aa12.2□□□□□ -0.46
EWSR1-217ENST00000483415 PRRT2Q7Z6L0 340 aaPredicted RBP12.2□□□□□ -0.46
EWSR1-217ENST00000483415 SENP2Q9HC62 589 aa12.2□□□□□ -0.46
EWSR1-217ENST00000483415 EIF3CLB5ME19 914 aaKnown RBP12.2□□□□□ -0.46
EWSR1-217ENST00000483415 F5H6K3 240 aa12.2□□□□□ -0.46
EWSR1-217ENST00000483415 KLRC3Q07444 240 aa12.2□□□□□ -0.46
EWSR1-217ENST00000483415 PABPC4Q13310 644 aaKnown RBP eCLIP12.2□□□□□ -0.46
EWSR1-217ENST00000483415 FOXR1Q6PIV2 292 aa12.2□□□□□ -0.46
EWSR1-217ENST00000483415 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms