RNA–Protein interactions for RNA: ENST00000482655.2

GTF3A-207, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 829 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-207ENST00000482655 JMJD8Q96S16 334 aa5.96□□□□□ -1.46
GTF3A-207ENST00000482655 NUDT19A8MXV4 375 aa5.95□□□□□ -1.46
GTF3A-207ENST00000482655 RFXAPO00287 272 aa5.95□□□□□ -1.46
GTF3A-207ENST00000482655 SSBP05455 408 aaKnown RBP eCLIP5.95□□□□□ -1.46
GTF3A-207ENST00000482655 ZSCAN22P10073 491 aaPredicted RBP5.95□□□□□ -1.46
GTF3A-207ENST00000482655 ATF4P18848 351 aaPredicted RBP5.95□□□□□ -1.46
GTF3A-207ENST00000482655 KIR3DS1Q14943 382 aa5.95□□□□□ -1.46
GTF3A-207ENST00000482655 RAB3GAP1Q15042 981 aa5.95□□□□□ -1.46
GTF3A-207ENST00000482655 EEF1DP3Q658K8 133 aa5.95□□□□□ -1.46
GTF3A-207ENST00000482655 CILP2Q8IUL8 1156 aa5.95□□□□□ -1.46
GTF3A-207ENST00000482655 TMEM52Q8NDY8 209 aa5.95□□□□□ -1.46
GTF3A-207ENST00000482655 PTCHD1Q96NR3 888 aa5.95□□□□□ -1.46
GTF3A-207ENST00000482655 SGPP1Q9BX95 441 aa5.95□□□□□ -1.46
GTF3A-207ENST00000482655 ACSL6Q9UKU0 697 aa5.95□□□□□ -1.46
GTF3A-207ENST00000482655 CNOT6Q9ULM6 557 aaKnown RBP5.95□□□□□ -1.46
GTF3A-207ENST00000482655 ANKRD34BA5PLL1 514 aa5.94□□□□□ -1.46
GTF3A-207ENST00000482655 STXBP3O00186 592 aa5.94□□□□□ -1.46
GTF3A-207ENST00000482655 VIPR1P32241 457 aa5.94□□□□□ -1.46
GTF3A-207ENST00000482655 SEPHS1P49903 392 aa5.94□□□□□ -1.46
GTF3A-207ENST00000482655 AMPD2Q01433 879 aa5.94□□□□□ -1.46
GTF3A-207ENST00000482655 DPY19L1Q2PZI1 675 aa5.94□□□□□ -1.46
GTF3A-207ENST00000482655 RCSD1Q6JBY9 416 aa5.94□□□□□ -1.46
GTF3A-207ENST00000482655 CRACR2BQ8N4Y2 399 aaPredicted RBP5.94□□□□□ -1.46
GTF3A-207ENST00000482655 FAM169BQ8N8A8 192 aa5.94□□□□□ -1.46
GTF3A-207ENST00000482655 KLHL6Q8WZ60 621 aa5.94□□□□□ -1.46
GTF3A-207ENST00000482655 TNFRSF12AQ9NP84 129 aa5.94□□□□□ -1.46
GTF3A-207ENST00000482655 CGGBP1Q9UFW8 167 aaPredicted RBP5.94□□□□□ -1.46
GTF3A-207ENST00000482655 CEBPAP49715 358 aaPredicted RBP5.93□□□□□ -1.46
GTF3A-207ENST00000482655 YBX1P67809 324 aaKnown RBP5.93□□□□□ -1.46
GTF3A-207ENST00000482655 GRB10Q13322 594 aa5.93□□□□□ -1.46
GTF3A-207ENST00000482655 NCAPHQ15003 741 aa5.93□□□□□ -1.46
GTF3A-207ENST00000482655 ZNF385BQ569K4 471 aa5.93□□□□□ -1.46
GTF3A-207ENST00000482655 TNNI3KQ59H18 835 aa5.93□□□□□ -1.46
GTF3A-207ENST00000482655 BICRALQ6AI39 1079 aa5.93□□□□□ -1.46
GTF3A-207ENST00000482655 SPOCD1Q6ZMY3 1216 aa5.93□□□□□ -1.46
GTF3A-207ENST00000482655 TMC6Q7Z403 805 aa5.93□□□□□ -1.46
GTF3A-207ENST00000482655 C1QL4Q86Z23 238 aa5.93□□□□□ -1.46
GTF3A-207ENST00000482655 PPP1R14AQ96A00 147 aa5.93□□□□□ -1.46
GTF3A-207ENST00000482655 RCC1LQ96I51 464 aaKnown RBP5.93□□□□□ -1.46
GTF3A-207ENST00000482655 IRF2BPLQ9H1B7 796 aa5.93□□□□□ -1.46
GTF3A-207ENST00000482655 MBD1Q9UIS9 605 aaPredicted RBP5.93□□□□□ -1.46
GTF3A-207ENST00000482655 BACE2Q9Y5Z0 518 aa5.93□□□□□ -1.46
GTF3A-207ENST00000482655 IRAK3Q9Y616 596 aa5.93□□□□□ -1.46
GTF3A-207ENST00000482655 AURKAO14965 403 aa5.92□□□□□ -1.46
GTF3A-207ENST00000482655 L1CAMP32004 1257 aa5.92□□□□□ -1.46
GTF3A-207ENST00000482655 CORO7P57737 925 aa5.92□□□□□ -1.46
GTF3A-207ENST00000482655 RBM10P98175 930 aaKnown RBP5.92□□□□□ -1.46
GTF3A-207ENST00000482655 MVKQ03426 396 aa5.92□□□□□ -1.46
GTF3A-207ENST00000482655 NR1I3Q14994 352 aa5.92□□□□□ -1.46
GTF3A-207ENST00000482655 POMZP3Q6PJE2 187 aa5.92□□□□□ -1.46
GTF3A-207ENST00000482655 SIAH1Q8IUQ4 282 aa5.92□□□□□ -1.46
GTF3A-207ENST00000482655 ARHGEF39Q8N4T4 335 aa5.92□□□□□ -1.46
GTF3A-207ENST00000482655 SIGLEC10Q96LC7 697 aa5.92□□□□□ -1.46
GTF3A-207ENST00000482655 APBA2Q99767 749 aa5.92□□□□□ -1.46
GTF3A-207ENST00000482655 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.92□□□□□ -1.46
GTF3A-207ENST00000482655 GCM1Q9NP62 436 aa5.92□□□□□ -1.46
GTF3A-207ENST00000482655 PDLIM7Q9NR12 457 aa5.92□□□□□ -1.46
GTF3A-207ENST00000482655 ACTR10Q9NZ32 417 aa5.92□□□□□ -1.46
GTF3A-207ENST00000482655 KLHL14Q9P2G3 628 aa5.92□□□□□ -1.46
GTF3A-207ENST00000482655 AKT3Q9Y243 479 aa5.92□□□□□ -1.46
GTF3A-207ENST00000482655 MRVI1Q9Y6F6 885 aa5.92□□□□□ -1.46
GTF3A-207ENST00000482655 C2orf71A6NGG8 1288 aa5.91□□□□□ -1.46
GTF3A-207ENST00000482655 NOP56O00567 594 aaKnown RBP5.91□□□□□ -1.46
GTF3A-207ENST00000482655 N4BP3O15049 544 aa5.91□□□□□ -1.46
GTF3A-207ENST00000482655 SMAD7O15105 426 aaKnown RBP5.91□□□□□ -1.46
GTF3A-207ENST00000482655 VAMP4O75379 141 aa5.91□□□□□ -1.46
GTF3A-207ENST00000482655 TACR1P25103 407 aa5.91□□□□□ -1.46
GTF3A-207ENST00000482655 ZNF143P52747 638 aaPredicted RBP5.91□□□□□ -1.46
GTF3A-207ENST00000482655 RPTNQ6XPR3 784 aa5.91□□□□□ -1.46
GTF3A-207ENST00000482655 LCNL1Q6ZST4 164 aa5.91□□□□□ -1.46
GTF3A-207ENST00000482655 CABP7Q86V35 215 aa5.91□□□□□ -1.46
GTF3A-207ENST00000482655 CNTD2Q9H8S5 307 aa5.91□□□□□ -1.46
GTF3A-207ENST00000482655 KCTD3Q9Y597 815 aa5.91□□□□□ -1.46
GTF3A-207ENST00000482655 TRBV23OR9-2A0A075B6M9 112 aa5.9□□□□□ -1.46
GTF3A-207ENST00000482655 CYBBP04839 570 aa5.9□□□□□ -1.46
GTF3A-207ENST00000482655 MSL3P1P0C860 447 aa5.9□□□□□ -1.46
GTF3A-207ENST00000482655 EPHB3P54753 998 aa5.9□□□□□ -1.46
GTF3A-207ENST00000482655 PLEKHN1Q494U1 663 aaPredicted RBP5.9□□□□□ -1.46
GTF3A-207ENST00000482655 FBLN7Q53RD9 439 aa5.9□□□□□ -1.46
GTF3A-207ENST00000482655 LARP1BQ659C4 914 aaKnown RBP5.9□□□□□ -1.46
GTF3A-207ENST00000482655 ZC3H14Q6PJT7 736 aaKnown RBP5.9□□□□□ -1.46
GTF3A-207ENST00000482655 PAQR3Q6TCH7 311 aa5.9□□□□□ -1.46
GTF3A-207ENST00000482655 TMEM151BQ8IW70 566 aa5.9□□□□□ -1.46
GTF3A-207ENST00000482655 BVESQ8NE79 360 aa5.9□□□□□ -1.46
GTF3A-207ENST00000482655 MZB1Q8WU39 189 aa5.9□□□□□ -1.46
GTF3A-207ENST00000482655 MCMBPQ9BTE3 642 aa5.9□□□□□ -1.46
GTF3A-207ENST00000482655 APEX2Q9UBZ4 518 aa5.9□□□□□ -1.46
GTF3A-207ENST00000482655 SUSD2Q9UGT4 822 aa5.9□□□□□ -1.46
GTF3A-207ENST00000482655 DBR1Q9UK59 544 aaKnown RBP5.9□□□□□ -1.46
GTF3A-207ENST00000482655 NPHP3-ACAD11A0A0J9YXS1 232 aa5.89□□□□□ -1.47
GTF3A-207ENST00000482655 SRGAP3O43295 1099 aa5.89□□□□□ -1.47
GTF3A-207ENST00000482655 KCNH1O95259 989 aa5.89□□□□□ -1.47
GTF3A-207ENST00000482655 PAMP19021 973 aa5.89□□□□□ -1.47
GTF3A-207ENST00000482655 PI3P19957 117 aa5.89□□□□□ -1.47
GTF3A-207ENST00000482655 MAPKAPK2P49137 400 aa5.89□□□□□ -1.47
GTF3A-207ENST00000482655 ARID5AQ03989 594 aa5.89□□□□□ -1.47
GTF3A-207ENST00000482655 SSPNQ14714 243 aa5.89□□□□□ -1.47
GTF3A-207ENST00000482655 CBX2Q14781 532 aaPredicted RBP5.89□□□□□ -1.47
GTF3A-207ENST00000482655 TCERG1LQ5VWI1 586 aa5.89□□□□□ -1.47
GTF3A-207ENST00000482655 AMIGO3Q86WK7 504 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms