RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 GRIK5Q16478 980 aa16.73■□□□□ 0.27
ATG4B-220ENST00000482507 KIF4BQ2VIQ3 1234 aa16.73■□□□□ 0.27
ATG4B-220ENST00000482507 USP17L1Q7RTZ2 530 aa16.73■□□□□ 0.27
ATG4B-220ENST00000482507 ZNF804AQ7Z570 1209 aa16.73■□□□□ 0.27
ATG4B-220ENST00000482507 KAT14Q9H8E8 782 aa16.73■□□□□ 0.27
ATG4B-220ENST00000482507 MAD2L2Q9UI95 211 aa16.73■□□□□ 0.27
ATG4B-220ENST00000482507 PCDHA6Q9UN73 950 aa16.73■□□□□ 0.27
ATG4B-220ENST00000482507 PCDHA8Q9Y5H6 950 aa16.73■□□□□ 0.27
ATG4B-220ENST00000482507 CTAGE9A4FU28 777 aa16.72■□□□□ 0.27
ATG4B-220ENST00000482507 PARP1P09874 1014 aaKnown RBP16.72■□□□□ 0.27
ATG4B-220ENST00000482507 CALML3P27482 149 aa16.72■□□□□ 0.27
ATG4B-220ENST00000482507 KIF5BP33176 963 aa16.72■□□□□ 0.27
ATG4B-220ENST00000482507 UBXN1Q04323 297 aa16.72■□□□□ 0.27
ATG4B-220ENST00000482507 SPAG1Q07617 926 aa16.72■□□□□ 0.27
ATG4B-220ENST00000482507 C12orf60Q5U649 245 aa16.72■□□□□ 0.27
ATG4B-220ENST00000482507 WWC2Q6AWC2 1192 aa16.72■□□□□ 0.27
ATG4B-220ENST00000482507 CYP26C1Q6V0L0 522 aa16.72■□□□□ 0.27
ATG4B-220ENST00000482507 DBNDD1Q9H9R9 158 aa16.72■□□□□ 0.27
ATG4B-220ENST00000482507 PIM2Q9P1W9 311 aa16.72■□□□□ 0.27
ATG4B-220ENST00000482507 TTC26A0AVF1 554 aa16.72■□□□□ 0.27
ATG4B-220ENST00000482507 CCDC151A5D8V7 595 aa16.72■□□□□ 0.27
ATG4B-220ENST00000482507 H3BQF6 201 aa16.72■□□□□ 0.27
ATG4B-220ENST00000482507 TGFB2P61812 414 aa16.72■□□□□ 0.27
ATG4B-220ENST00000482507 FAM193AP78312 1265 aa16.72■□□□□ 0.27
ATG4B-220ENST00000482507 SLC44A5Q8NCS7 719 aa16.72■□□□□ 0.27
ATG4B-220ENST00000482507 PYM1Q9BRP8 204 aaKnown RBP16.72■□□□□ 0.27
ATG4B-220ENST00000482507 SPON1Q9HCB6 807 aa16.72■□□□□ 0.27
ATG4B-220ENST00000482507 RMND1Q9NWS8 449 aa16.72■□□□□ 0.27
ATG4B-220ENST00000482507 INF2Q27J81 1249 aa16.71■□□□□ 0.27
ATG4B-220ENST00000482507 ZBTB9Q96C00 473 aa16.71■□□□□ 0.27
ATG4B-220ENST00000482507 MXD3Q9BW11 206 aa16.71■□□□□ 0.27
ATG4B-220ENST00000482507 SH3GLB2Q9NR46 395 aa16.71■□□□□ 0.27
ATG4B-220ENST00000482507 TFR2Q9UP52 801 aa16.71■□□□□ 0.27
ATG4B-220ENST00000482507 MTMR7Q9Y216 660 aa16.71■□□□□ 0.27
ATG4B-220ENST00000482507 MAP2K7O14733 419 aa16.71■□□□□ 0.27
ATG4B-220ENST00000482507 GYS2P54840 703 aa16.71■□□□□ 0.27
ATG4B-220ENST00000482507 GRM4Q14833 912 aa16.71■□□□□ 0.27
ATG4B-220ENST00000482507 AOC3Q16853 763 aa16.71■□□□□ 0.27
ATG4B-220ENST00000482507 DGKHQ86XP1 1220 aa16.71■□□□□ 0.27
ATG4B-220ENST00000482507 CEP112Q8N8E3 955 aa16.71■□□□□ 0.27
ATG4B-220ENST00000482507 ZNF507Q8TCN5 953 aa16.71■□□□□ 0.27
ATG4B-220ENST00000482507 SH3RF3Q8TEJ3 882 aaPredicted RBP16.71■□□□□ 0.27
ATG4B-220ENST00000482507 AMPD2Q01433 879 aa16.7■□□□□ 0.26
ATG4B-220ENST00000482507 BRD3Q15059 726 aa16.7■□□□□ 0.26
ATG4B-220ENST00000482507 BEND6Q5SZJ8 279 aaPredicted RBP16.7■□□□□ 0.26
ATG4B-220ENST00000482507 DTHD1Q6ZMT9 781 aa16.7■□□□□ 0.26
ATG4B-220ENST00000482507 MB21D1Q8N884 522 aa16.7■□□□□ 0.26
ATG4B-220ENST00000482507 MSANTD4Q8NCY6 345 aa16.7■□□□□ 0.26
ATG4B-220ENST00000482507 NAPGQ99747 312 aaPredicted RBP16.7■□□□□ 0.26
ATG4B-220ENST00000482507 CPVLQ9H3G5 476 aa16.7■□□□□ 0.26
ATG4B-220ENST00000482507 SUGCTQ9HAC7 445 aa16.7■□□□□ 0.26
ATG4B-220ENST00000482507 RAB21Q9UL25 225 aa16.7■□□□□ 0.26
ATG4B-220ENST00000482507 BCS1LQ9Y276 419 aa16.7■□□□□ 0.26
ATG4B-220ENST00000482507 G3V3G9 751 aa16.7■□□□□ 0.26
ATG4B-220ENST00000482507 H7C1D1 291 aa16.7■□□□□ 0.26
ATG4B-220ENST00000482507 STXBP3O00186 592 aa16.7■□□□□ 0.26
ATG4B-220ENST00000482507 GTF2IP78347 998 aa16.7■□□□□ 0.26
ATG4B-220ENST00000482507 DCAF8Q5TAQ9 597 aa16.7■□□□□ 0.26
ATG4B-220ENST00000482507 WDR59Q6PJI9 974 aa16.7■□□□□ 0.26
ATG4B-220ENST00000482507 C15orf52Q6ZUT6 534 aaKnown RBP16.7■□□□□ 0.26
ATG4B-220ENST00000482507 DZIP1Q86YF9 867 aaKnown RBP16.7■□□□□ 0.26
ATG4B-220ENST00000482507 ANKS1AQ92625 1134 aa16.7■□□□□ 0.26
ATG4B-220ENST00000482507 EEF2KMTQ96G04 330 aa16.7■□□□□ 0.26
ATG4B-220ENST00000482507 CCDC194A0A1B0GVG4 234 aa16.69■□□□□ 0.26
ATG4B-220ENST00000482507 LGALS16A8MUM7 142 aa16.69■□□□□ 0.26
ATG4B-220ENST00000482507 TRIM14Q14142 442 aa16.69■□□□□ 0.26
ATG4B-220ENST00000482507 DIXDC1Q155Q3 683 aa16.69■□□□□ 0.26
ATG4B-220ENST00000482507 DALRD3Q5D0E6 543 aaKnown RBP16.69■□□□□ 0.26
ATG4B-220ENST00000482507 JAKMIP3Q5VZ66 844 aa16.69■□□□□ 0.26
ATG4B-220ENST00000482507 HEATR3Q7Z4Q2 680 aa16.69■□□□□ 0.26
ATG4B-220ENST00000482507 NOA1Q8NC60 698 aaKnown RBP16.69■□□□□ 0.26
ATG4B-220ENST00000482507 NEK11Q8NG66 645 aa16.69■□□□□ 0.26
ATG4B-220ENST00000482507 ZNF277Q9NRM2 450 aaPredicted RBP16.69■□□□□ 0.26
ATG4B-220ENST00000482507 KBTBD4Q9NVX7 518 aa16.69■□□□□ 0.26
ATG4B-220ENST00000482507 EPN1Q9Y6I3 576 aaPredicted RBP16.69■□□□□ 0.26
ATG4B-220ENST00000482507 MAST2Q6P0Q8 1798 aa16.69■□□□□ 0.26
ATG4B-220ENST00000482507 NDUFA10O95299 355 aa16.69■□□□□ 0.26
ATG4B-220ENST00000482507 RHOXF2BP0C7M4 288 aa16.69■□□□□ 0.26
ATG4B-220ENST00000482507 GOLGA8HP0CJ92 632 aa16.69■□□□□ 0.26
ATG4B-220ENST00000482507 ANKRD20A12PQ8NF67 263 aa16.69■□□□□ 0.26
ATG4B-220ENST00000482507 RHOXF2Q9BQY4 288 aa16.69■□□□□ 0.26
ATG4B-220ENST00000482507 RASSF10A6NK89 507 aa16.68■□□□□ 0.26
ATG4B-220ENST00000482507 NKRFO15226 690 aaKnown RBP eCLIP16.68■□□□□ 0.269e-11■■□□□ 11.5
ATG4B-220ENST00000482507 IL1R1P14778 569 aa16.68■□□□□ 0.26
ATG4B-220ENST00000482507 USP5P45974 858 aa16.68■□□□□ 0.26
ATG4B-220ENST00000482507 KCNB1Q14721 858 aa16.68■□□□□ 0.26
ATG4B-220ENST00000482507 NCAPH2Q6IBW4 605 aa16.68■□□□□ 0.26
ATG4B-220ENST00000482507 TTI2Q6NXR4 508 aa16.68■□□□□ 0.26
ATG4B-220ENST00000482507 DNAJC7Q99615 494 aa16.68■□□□□ 0.26
ATG4B-220ENST00000482507 DUSP9Q99956 384 aaKnown RBP16.68■□□□□ 0.26
ATG4B-220ENST00000482507 CD2APQ9Y5K6 639 aa16.68■□□□□ 0.26
ATG4B-220ENST00000482507 FLT1P17948 1338 aa16.68■□□□□ 0.26
ATG4B-220ENST00000482507 RHOBTB3O94955 611 aa16.68■□□□□ 0.26
ATG4B-220ENST00000482507 HERVK_113P62684 666 aa16.68■□□□□ 0.26
ATG4B-220ENST00000482507 VSNL1P62760 191 aa16.68■□□□□ 0.26
ATG4B-220ENST00000482507 DAGLBQ8NCG7 672 aa16.68■□□□□ 0.26
ATG4B-220ENST00000482507 GIMAP8Q8ND71 665 aaPredicted RBP16.68■□□□□ 0.26
ATG4B-220ENST00000482507 HNRNPLLQ8WVV9 542 aaKnown RBP16.68■□□□□ 0.26
ATG4B-220ENST00000482507 FHDC1Q9C0D6 1143 aaPredicted RBP16.68■□□□□ 0.26
ATG4B-220ENST00000482507 ABCB6Q9NP58 842 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms