RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 SMIM23A6NLE4 172 aa14.14□□□□□ -0.15
VPS52-218ENST00000482399 RAPGEF1Q13905 1077 aa14.14□□□□□ -0.15
VPS52-218ENST00000482399 ALX1Q15699 326 aa14.14□□□□□ -0.15
VPS52-218ENST00000482399 TCERG1LQ5VWI1 586 aa14.14□□□□□ -0.15
VPS52-218ENST00000482399 USP17L1Q7RTZ2 530 aa14.14□□□□□ -0.15
VPS52-218ENST00000482399 PNMA1Q8ND90 353 aa14.14□□□□□ -0.15
VPS52-218ENST00000482399 MTRQ99707 1265 aa14.14□□□□□ -0.15
VPS52-218ENST00000482399 NFU1Q9UMS0 254 aa14.14□□□□□ -0.15
VPS52-218ENST00000482399 TADA2BQ86TJ2 420 aa14.13□□□□□ -0.15
VPS52-218ENST00000482399 CEP57Q86XR8 500 aa14.13□□□□□ -0.15
VPS52-218ENST00000482399 FAM114A1Q8IWE2 563 aa14.13□□□□□ -0.15
VPS52-218ENST00000482399 CCDC155Q8N6L0 562 aa14.13□□□□□ -0.15
VPS52-218ENST00000482399 EPB41L5Q9HCM4 733 aa14.13□□□□□ -0.15
VPS52-218ENST00000482399 BIN2Q9UBW5 565 aaPredicted RBP14.13□□□□□ -0.15
VPS52-218ENST00000482399 CAPN6Q9Y6Q1 641 aa14.13□□□□□ -0.15
VPS52-218ENST00000482399 TRAF5O00463 557 aa14.13□□□□□ -0.15
VPS52-218ENST00000482399 EXOC5O00471 708 aa14.13□□□□□ -0.15
VPS52-218ENST00000482399 CACNB1Q02641 598 aaPredicted RBP14.13□□□□□ -0.15
VPS52-218ENST00000482399 EHHADHQ08426 723 aa14.13□□□□□ -0.15
VPS52-218ENST00000482399 STK4Q13043 487 aa14.13□□□□□ -0.15
VPS52-218ENST00000482399 TRAPPC11Q7Z392 1133 aa14.13□□□□□ -0.15
VPS52-218ENST00000482399 SLC44A5Q8NCS7 719 aa14.13□□□□□ -0.15
VPS52-218ENST00000482399 PYM1Q9BRP8 204 aaKnown RBP14.13□□□□□ -0.15
VPS52-218ENST00000482399 SEPT11Q9NVA2 429 aaKnown RBP14.13□□□□□ -0.15
VPS52-218ENST00000482399 WDR17Q8IZU2 1322 aa14.13□□□□□ -0.15
VPS52-218ENST00000482399 GFPT1Q06210 699 aaPredicted RBP14.13□□□□□ -0.15
VPS52-218ENST00000482399 ANKRD40Q6AI12 368 aa14.13□□□□□ -0.15
VPS52-218ENST00000482399 NFAT5O94916 1531 aa14.13□□□□□ -0.15
VPS52-218ENST00000482399 TMEM94Q12767 1356 aa14.12□□□□□ -0.15
VPS52-218ENST00000482399 ZSCAN5CA6NGD5 496 aaPredicted RBP14.12□□□□□ -0.15
VPS52-218ENST00000482399 SYF2O95926 243 aaKnown RBP14.12□□□□□ -0.15
VPS52-218ENST00000482399 IRAK1P51617 712 aa14.12□□□□□ -0.15
VPS52-218ENST00000482399 CDR1P51861 262 aa14.12□□□□□ -0.15
VPS52-218ENST00000482399 CCNI2Q6ZMN8 369 aaPredicted RBP14.12□□□□□ -0.15
VPS52-218ENST00000482399 SHISA4Q96DD7 197 aa14.12□□□□□ -0.15
VPS52-218ENST00000482399 KRT12Q99456 494 aa14.12□□□□□ -0.15
VPS52-218ENST00000482399 GOPCQ9HD26 462 aa14.12□□□□□ -0.15
VPS52-218ENST00000482399 SEC63Q9UGP8 760 aaKnown RBP14.12□□□□□ -0.15
VPS52-218ENST00000482399 BICDL2A1A5D9 508 aa14.12□□□□□ -0.15
VPS52-218ENST00000482399 SEMA3EO15041 775 aa14.12□□□□□ -0.15
VPS52-218ENST00000482399 PRDX5P30044 214 aa14.12□□□□□ -0.15
VPS52-218ENST00000482399 TNNI2P48788 182 aa14.12□□□□□ -0.15
VPS52-218ENST00000482399 KIF11P52732 1056 aa14.12□□□□□ -0.15
VPS52-218ENST00000482399 TROAPQ12815 778 aa14.12□□□□□ -0.15
VPS52-218ENST00000482399 TRIM58Q8NG06 486 aa14.12□□□□□ -0.15
VPS52-218ENST00000482399 P2RX5Q93086 422 aa14.12□□□□□ -0.15
VPS52-218ENST00000482399 ARL8AQ96BM9 186 aa14.12□□□□□ -0.15
VPS52-218ENST00000482399 UBXN6Q9BZV1 441 aa14.12□□□□□ -0.15
VPS52-218ENST00000482399 CCDC113Q9H0I3 377 aa14.12□□□□□ -0.15
VPS52-218ENST00000482399 FAM184BQ9ULE4 1060 aa14.12□□□□□ -0.15
VPS52-218ENST00000482399 PPFIA1Q13136 1202 aa14.12□□□□□ -0.15
VPS52-218ENST00000482399 SPATA4Q8NEY3 305 aa14.12□□□□□ -0.15
VPS52-218ENST00000482399 ANKIB1Q9P2G1 1089 aa14.12□□□□□ -0.15
VPS52-218ENST00000482399 PCDHA13Q9Y5I0 950 aa14.12□□□□□ -0.15
VPS52-218ENST00000482399 OVOS2A0A0G2JMS6 1433 aa14.11□□□□□ -0.15
VPS52-218ENST00000482399 E7EVH7 732 aa14.11□□□□□ -0.15
VPS52-218ENST00000482399 EEF1GP26641 437 aaKnown RBP14.11□□□□□ -0.15
VPS52-218ENST00000482399 ZBED6P86452 979 aa14.11□□□□□ -0.15
VPS52-218ENST00000482399 GUCY1A3Q02108 690 aa14.11□□□□□ -0.15
VPS52-218ENST00000482399 TRIM28Q13263 835 aaKnown RBP14.11□□□□□ -0.15
VPS52-218ENST00000482399 TXNRD1Q16881 649 aa14.11□□□□□ -0.15
VPS52-218ENST00000482399 CEP85LQ5SZL2 805 aa14.11□□□□□ -0.15
VPS52-218ENST00000482399 DNAAF5Q86Y56 855 aa14.11□□□□□ -0.15
VPS52-218ENST00000482399 ADSSL1Q8N142 457 aa14.11□□□□□ -0.15
VPS52-218ENST00000482399 TOPAZ1Q8N9V7 1692 aa14.11□□□□□ -0.15
VPS52-218ENST00000482399 HEXIM1O94992 359 aaKnown RBP14.11□□□□□ -0.15
VPS52-218ENST00000482399 ADAMTS2O95450 1211 aa14.11□□□□□ -0.15
VPS52-218ENST00000482399 LONP1P36776 959 aaKnown RBP14.11□□□□□ -0.15
VPS52-218ENST00000482399 PBX1P40424 430 aa14.11□□□□□ -0.15
VPS52-218ENST00000482399 AMPD3Q01432 767 aa14.11□□□□□ -0.15
VPS52-218ENST00000482399 NNTQ13423 1086 aa14.11□□□□□ -0.15
VPS52-218ENST00000482399 IL17AQ16552 155 aa14.11□□□□□ -0.15
VPS52-218ENST00000482399 ADAT2Q7Z6V5 191 aaKnown RBP14.11□□□□□ -0.15
VPS52-218ENST00000482399 GOLPH3Q9H4A6 298 aa14.11□□□□□ -0.15
VPS52-218ENST00000482399 EFCC1Q9HA90 598 aa14.11□□□□□ -0.15
VPS52-218ENST00000482399 LOC102724159A0A0B4J2E5 919 aa14.1□□□□□ -0.15
VPS52-218ENST00000482399 GOLGA6L7A0A1B0GV03 622 aa14.1□□□□□ -0.15
VPS52-218ENST00000482399 APBA1Q02410 837 aa14.1□□□□□ -0.15
VPS52-218ENST00000482399 PWP2Q15269 919 aaKnown RBP14.1□□□□□ -0.15
VPS52-218ENST00000482399 PDXDC2PQ6P474 469 aa14.1□□□□□ -0.15
VPS52-218ENST00000482399 MAPKAPK5Q8IW41 473 aa14.1□□□□□ -0.15
VPS52-218ENST00000482399 EFCAB13Q8IY85 973 aa14.1□□□□□ -0.15
VPS52-218ENST00000482399 CAPN11Q9UMQ6 739 aa14.1□□□□□ -0.15
VPS52-218ENST00000482399 FAM205AQ6ZU69 1335 aa14.1□□□□□ -0.15
VPS52-218ENST00000482399 TLDC2A0PJX2 215 aa14.1□□□□□ -0.15
VPS52-218ENST00000482399 CORO7P57737 925 aa14.1□□□□□ -0.15
VPS52-218ENST00000482399 IFT88Q13099 833 aa14.1□□□□□ -0.15
VPS52-218ENST00000482399 WDR59Q6PJI9 974 aa14.1□□□□□ -0.15
VPS52-218ENST00000482399 TAX1BP1Q86VP1 789 aa14.1□□□□□ -0.15
VPS52-218ENST00000482399 VGLL2Q8N8G2 317 aa14.1□□□□□ -0.15
VPS52-218ENST00000482399 UBLCP1Q8WVY7 318 aaPredicted RBP14.1□□□□□ -0.15
VPS52-218ENST00000482399 HYOU1Q9Y4L1 999 aa14.1□□□□□ -0.15
VPS52-218ENST00000482399 A0A087WUV0 522 aaPredicted RBP14.1□□□□□ -0.15
VPS52-218ENST00000482399 LRRC53A6NM62 1247 aa14.1□□□□□ -0.15
VPS52-218ENST00000482399 HGSO14964 777 aaPredicted RBP14.1□□□□□ -0.15
VPS52-218ENST00000482399 POLR2FP61218 127 aaKnown RBP14.1□□□□□ -0.15
VPS52-218ENST00000482399 SEC23AQ15436 765 aa14.1□□□□□ -0.15
VPS52-218ENST00000482399 TRMT1LQ7Z2T5 733 aaKnown RBP14.1□□□□□ -0.15
VPS52-218ENST00000482399 TICAM2Q86XR7 235 aa14.1□□□□□ -0.15
VPS52-218ENST00000482399 SPATA20Q8TB22 786 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms