RNA–Protein interactions for RNA: ENST00000482056.2

C9orf3-218, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 1,951 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-218ENST00000482056 SMIM5Q71RC9 77 aa17.21■□□□□ 0.35
C9orf3-218ENST00000482056 MAPKAPK5Q8IW41 473 aa17.21■□□□□ 0.35
C9orf3-218ENST00000482056 CSGALNACT2Q8N6G5 542 aa17.21■□□□□ 0.35
C9orf3-218ENST00000482056 MYO6Q9UM54 1294 aa17.21■□□□□ 0.35
C9orf3-218ENST00000482056 CCNT1O60563 726 aaKnown RBP17.2■□□□□ 0.34
C9orf3-218ENST00000482056 EIF3JO75822 258 aaKnown RBP17.2■□□□□ 0.34
C9orf3-218ENST00000482056 IPO7O95373 1038 aaKnown RBP17.2■□□□□ 0.34
C9orf3-218ENST00000482056 PLCG1P19174 1290 aa17.2■□□□□ 0.34
C9orf3-218ENST00000482056 CCNE1P24864 410 aa17.2■□□□□ 0.34
C9orf3-218ENST00000482056 CYLC1P35663 651 aaPredicted RBP17.2■□□□□ 0.34
C9orf3-218ENST00000482056 TTI2Q6NXR4 508 aa17.2■□□□□ 0.34
C9orf3-218ENST00000482056 HDXQ7Z353 690 aa17.2■□□□□ 0.34
C9orf3-218ENST00000482056 NEK8Q86SG6 692 aa17.2■□□□□ 0.34
C9orf3-218ENST00000482056 P2RX5Q93086 422 aa17.2■□□□□ 0.34
C9orf3-218ENST00000482056 IQCDQ96DY2 449 aa17.2■□□□□ 0.34
C9orf3-218ENST00000482056 CALML4Q96GE6 196 aa17.2■□□□□ 0.34
C9orf3-218ENST00000482056 EYA3Q99504 573 aa17.2■□□□□ 0.34
C9orf3-218ENST00000482056 PLIN2Q99541 437 aa17.2■□□□□ 0.34
C9orf3-218ENST00000482056 ANKZF1Q9H8Y5 726 aa17.2■□□□□ 0.34
C9orf3-218ENST00000482056 SAP30BPQ9UHR5 308 aaKnown RBP17.2■□□□□ 0.34
C9orf3-218ENST00000482056 CCNL1Q9UK58 526 aaPredicted RBP17.2■□□□□ 0.34
C9orf3-218ENST00000482056 SMCO2A6NFE2 343 aa17.2■□□□□ 0.34
C9orf3-218ENST00000482056 SRGNP10124 158 aa17.2■□□□□ 0.34
C9orf3-218ENST00000482056 PMS1P54277 932 aaKnown RBP17.2■□□□□ 0.34
C9orf3-218ENST00000482056 PDE4DQ08499 809 aa17.2■□□□□ 0.34
C9orf3-218ENST00000482056 LETM2Q2VYF4 491 aa17.2■□□□□ 0.34
C9orf3-218ENST00000482056 C16orf86Q6ZW13 317 aa17.2■□□□□ 0.34
C9orf3-218ENST00000482056 SLF2Q8IX21 1173 aa17.2■□□□□ 0.34
C9orf3-218ENST00000482056 NEDD1Q8NHV4 660 aa17.2■□□□□ 0.34
C9orf3-218ENST00000482056 CHP1Q99653 195 aa17.2■□□□□ 0.34
C9orf3-218ENST00000482056 C7orf25Q9BPX7 421 aa17.2■□□□□ 0.34
C9orf3-218ENST00000482056 TUBGCP2Q9BSJ2 902 aa17.2■□□□□ 0.34
C9orf3-218ENST00000482056 GUCA1BQ9UMX6 200 aa17.2■□□□□ 0.34
C9orf3-218ENST00000482056 TNRC6CQ9HCJ0 1690 aaKnown RBP17.19■□□□□ 0.34
C9orf3-218ENST00000482056 BTAF1O14981 1849 aa17.19■□□□□ 0.34
C9orf3-218ENST00000482056 hCG_1984214I3L0E3 225 aa17.19■□□□□ 0.34
C9orf3-218ENST00000482056 GOLGA8HP0CJ92 632 aa17.19■□□□□ 0.34
C9orf3-218ENST00000482056 CDK8P49336 464 aa17.19■□□□□ 0.34
C9orf3-218ENST00000482056 ASIC1P78348 528 aa17.19■□□□□ 0.34
C9orf3-218ENST00000482056 SLC35G1Q2M3R5 365 aa17.19■□□□□ 0.34
C9orf3-218ENST00000482056 CNNM4Q6P4Q7 775 aa17.19■□□□□ 0.34
C9orf3-218ENST00000482056 ZNF713Q8N859 430 aaPredicted RBP17.19■□□□□ 0.34
C9orf3-218ENST00000482056 SLC44A5Q8NCS7 719 aa17.19■□□□□ 0.34
C9orf3-218ENST00000482056 ARHGEF1Q92888 912 aaKnown RBP17.19■□□□□ 0.34
C9orf3-218ENST00000482056 RTFDC1Q9BY42 306 aaPredicted RBP17.19■□□□□ 0.34
C9orf3-218ENST00000482056 FLT1P17948 1338 aa17.19■□□□□ 0.34
C9orf3-218ENST00000482056 PSMD14O00487 310 aa17.19■□□□□ 0.34
C9orf3-218ENST00000482056 TRIM21P19474 475 aaKnown RBP17.19■□□□□ 0.34
C9orf3-218ENST00000482056 RFC4P35249 363 aa17.19■□□□□ 0.34
C9orf3-218ENST00000482056 BTDP43251 543 aa17.19■□□□□ 0.34
C9orf3-218ENST00000482056 TXNRD1Q16881 649 aa17.19■□□□□ 0.34
C9orf3-218ENST00000482056 ZNF662Q6ZS27 426 aa17.19■□□□□ 0.34
C9orf3-218ENST00000482056 KIAA1328Q86T90 577 aa17.19■□□□□ 0.34
C9orf3-218ENST00000482056 TEX11Q8IYF3 940 aa17.19■□□□□ 0.34
C9orf3-218ENST00000482056 CCDC170Q8IYT3 715 aa17.19■□□□□ 0.34
C9orf3-218ENST00000482056 MSL3Q8N5Y2 521 aaKnown RBP17.19■□□□□ 0.34
C9orf3-218ENST00000482056 TRIM9Q9C026 710 aa17.19■□□□□ 0.34
C9orf3-218ENST00000482056 CALCOCO1Q9P1Z2 691 aa17.19■□□□□ 0.34
C9orf3-218ENST00000482056 B4DLN1 442 aa17.18■□□□□ 0.34
C9orf3-218ENST00000482056 MAP2K7O14733 419 aa17.18■□□□□ 0.34
C9orf3-218ENST00000482056 KRT86O43790 486 aa17.18■□□□□ 0.34
C9orf3-218ENST00000482056 HOXA7P31268 230 aaPredicted RBP17.18■□□□□ 0.34
C9orf3-218ENST00000482056 MTIF2P46199 727 aaKnown RBP17.18■□□□□ 0.34
C9orf3-218ENST00000482056 TBC1D8BQ0IIM8 1120 aa17.18■□□□□ 0.34
C9orf3-218ENST00000482056 MEA1Q16626 185 aa17.18■□□□□ 0.34
C9orf3-218ENST00000482056 COBLL1Q53SF7 1204 aa17.18■□□□□ 0.34
C9orf3-218ENST00000482056 FKBP15Q5T1M5 1219 aa17.18■□□□□ 0.34
C9orf3-218ENST00000482056 TXLNBQ8N3L3 684 aa17.18■□□□□ 0.34
C9orf3-218ENST00000482056 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.18■□□□□ 0.34
C9orf3-218ENST00000482056 CDK5RAP2Q96SN8 1893 aa17.17■□□□□ 0.34
C9orf3-218ENST00000482056 ESYT2A0FGR8 921 aa17.17■□□□□ 0.34
C9orf3-218ENST00000482056 ERICH4A6NGS2 130 aa17.17■□□□□ 0.34
C9orf3-218ENST00000482056 MCM3P25205 808 aa17.17■□□□□ 0.34
C9orf3-218ENST00000482056 ZBED6P86452 979 aa17.17■□□□□ 0.34
C9orf3-218ENST00000482056 AMPD2Q01433 879 aa17.17■□□□□ 0.34
C9orf3-218ENST00000482056 VPS72Q15906 364 aa17.17■□□□□ 0.34
C9orf3-218ENST00000482056 CCDC122Q5T0U0 273 aa17.17■□□□□ 0.34
C9orf3-218ENST00000482056 REXO1Q8N1G1 1221 aaKnown RBP17.17■□□□□ 0.34
C9orf3-218ENST00000482056 CNBD1Q8NA66 436 aa17.17■□□□□ 0.34
C9orf3-218ENST00000482056 CNOT6LQ96LI5 555 aaKnown RBP17.17■□□□□ 0.34
C9orf3-218ENST00000482056 PCMTD1Q96MG8 357 aaPredicted RBP17.17■□□□□ 0.34
C9orf3-218ENST00000482056 DUSP9Q99956 384 aaKnown RBP17.17■□□□□ 0.34
C9orf3-218ENST00000482056 SNED1Q8TER0 1413 aa17.17■□□□□ 0.34
C9orf3-218ENST00000482056 GPR75-ASB3A0A0A6YYF3 556 aa17.17■□□□□ 0.34
C9orf3-218ENST00000482056 RHOXF2BP0C7M4 288 aa17.17■□□□□ 0.34
C9orf3-218ENST00000482056 TMEM266Q2M3C6 531 aa17.17■□□□□ 0.34
C9orf3-218ENST00000482056 BEND6Q5SZJ8 279 aaPredicted RBP17.17■□□□□ 0.34
C9orf3-218ENST00000482056 RPGRQ92834 1020 aaKnown RBP17.17■□□□□ 0.34
C9orf3-218ENST00000482056 RHOXF2Q9BQY4 288 aa17.17■□□□□ 0.34
C9orf3-218ENST00000482056 NOC4LQ9BVI4 516 aaKnown RBP17.17■□□□□ 0.34
C9orf3-218ENST00000482056 ACBD3Q9H3P7 528 aa17.17■□□□□ 0.34
C9orf3-218ENST00000482056 REXO2Q9Y3B8 237 aaKnown RBP17.17■□□□□ 0.34
C9orf3-218ENST00000482056 FGFR1OPO95684 399 aaKnown RBP17.16■□□□□ 0.34
C9orf3-218ENST00000482056 ABL1P00519 1130 aa17.16■□□□□ 0.34
C9orf3-218ENST00000482056 ATP2B4P23634 1241 aa17.16■□□□□ 0.34
C9orf3-218ENST00000482056 CKAP4Q07065 602 aaKnown RBP17.16■□□□□ 0.34
C9orf3-218ENST00000482056 FIGNQ5HY92 759 aa17.16■□□□□ 0.34
C9orf3-218ENST00000482056 TRAPPC3LQ5T215 181 aa17.16■□□□□ 0.34
C9orf3-218ENST00000482056 SV2BQ7L1I2 683 aa17.16■□□□□ 0.34
C9orf3-218ENST00000482056 JAKMIP2Q96AA8 810 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms