RNA–Protein interactions for RNA: ENST00000480067.1

CLDN11-205, Transcript of claudin 11, humanhuman

TSL 1 (best)

Gene CLDN11, Length 1,589 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-205ENST00000480067 INTS4Q96HW7 963 aaKnown RBP12.91□□□□□ -0.34
CLDN11-205ENST00000480067 BARHL2Q9NY43 387 aa12.91□□□□□ -0.34
CLDN11-205ENST00000480067 SMC3Q9UQE7 1217 aa12.91□□□□□ -0.34
CLDN11-205ENST00000480067 MRPL11Q9Y3B7 192 aaKnown RBP12.91□□□□□ -0.34
CLDN11-205ENST00000480067 KIF3AQ9Y496 699 aa12.91□□□□□ -0.34
CLDN11-205ENST00000480067 RBM19Q9Y4C8 960 aaKnown RBP12.91□□□□□ -0.34
CLDN11-205ENST00000480067 BAZ2BQ9UIF8 2168 aaKnown RBP12.91□□□□□ -0.34
CLDN11-205ENST00000480067 ABCB11O95342 1321 aa12.91□□□□□ -0.34
CLDN11-205ENST00000480067 THSD7BQ9C0I4 1608 aa12.91□□□□□ -0.34
CLDN11-205ENST00000480067 hCG_1984214I3L0E3 225 aa12.9□□□□□ -0.34
CLDN11-205ENST00000480067 GPR25O00155 361 aa12.9□□□□□ -0.34
CLDN11-205ENST00000480067 FDPSP14324 419 aaKnown RBP12.9□□□□□ -0.34
CLDN11-205ENST00000480067 XBP1P17861 261 aa12.9□□□□□ -0.34
CLDN11-205ENST00000480067 MAPK4P31152 587 aa12.9□□□□□ -0.34
CLDN11-205ENST00000480067 KIF22Q14807 665 aa12.9□□□□□ -0.34
CLDN11-205ENST00000480067 WWC2Q6AWC2 1192 aa12.9□□□□□ -0.34
CLDN11-205ENST00000480067 ZNF713Q8N859 430 aaPredicted RBP12.9□□□□□ -0.34
CLDN11-205ENST00000480067 SHCBP1Q8NEM2 672 aa12.9□□□□□ -0.34
CLDN11-205ENST00000480067 CHST13Q8NET6 341 aa12.9□□□□□ -0.34
CLDN11-205ENST00000480067 CCDC12Q8WUD4 166 aaPredicted RBP12.9□□□□□ -0.34
CLDN11-205ENST00000480067 GPKOWQ92917 476 aaPredicted RBP eCLIP12.9□□□□□ -0.34
CLDN11-205ENST00000480067 PORCNQ9H237 461 aa12.9□□□□□ -0.34
CLDN11-205ENST00000480067 RNF146Q9NTX7 359 aa12.9□□□□□ -0.34
CLDN11-205ENST00000480067 DAXXQ9UER7 740 aaPredicted RBP12.9□□□□□ -0.34
CLDN11-205ENST00000480067 FBXO40Q9UH90 709 aa12.9□□□□□ -0.34
CLDN11-205ENST00000480067 TSKSQ9UJT2 592 aa12.9□□□□□ -0.34
CLDN11-205ENST00000480067 RLFQ13129 1914 aa12.9□□□□□ -0.34
CLDN11-205ENST00000480067 ECM2O94769 699 aaPredicted RBP12.9□□□□□ -0.35
CLDN11-205ENST00000480067 TAL1P17542 331 aaPredicted RBP12.9□□□□□ -0.35
CLDN11-205ENST00000480067 NAPAP54920 295 aa12.9□□□□□ -0.35
CLDN11-205ENST00000480067 LACTBP83111 547 aaPredicted RBP12.9□□□□□ -0.35
CLDN11-205ENST00000480067 NOM1Q5C9Z4 860 aaKnown RBP12.9□□□□□ -0.35
CLDN11-205ENST00000480067 ALG1Q9BT22 464 aa12.9□□□□□ -0.35
CLDN11-205ENST00000480067 ACAD9Q9H845 621 aa12.9□□□□□ -0.35
CLDN11-205ENST00000480067 EFCC1Q9HA90 598 aa12.9□□□□□ -0.35
CLDN11-205ENST00000480067 FOXD4L1Q9NU39 408 aa12.9□□□□□ -0.35
CLDN11-205ENST00000480067 IVNS1ABPQ9Y6Y0 642 aa12.9□□□□□ -0.35
CLDN11-205ENST00000480067 STXBP3O00186 592 aa12.89□□□□□ -0.35
CLDN11-205ENST00000480067 STRNO43815 780 aa12.89□□□□□ -0.35
CLDN11-205ENST00000480067 FCER1AP12319 257 aa12.89□□□□□ -0.35
CLDN11-205ENST00000480067 GJB2P29033 226 aa12.89□□□□□ -0.35
CLDN11-205ENST00000480067 TRIM29Q14134 588 aa12.89□□□□□ -0.35
CLDN11-205ENST00000480067 MUM1L1Q5H9M0 696 aa12.89□□□□□ -0.35
CLDN11-205ENST00000480067 MCF2L2Q86YR7 1114 aa12.89□□□□□ -0.35
CLDN11-205ENST00000480067 ANKRD35Q8N283 1001 aa12.89□□□□□ -0.35
CLDN11-205ENST00000480067 PSTPIP2Q9H939 334 aa12.89□□□□□ -0.35
CLDN11-205ENST00000480067 SH3GLB2Q9NR46 395 aa12.89□□□□□ -0.35
CLDN11-205ENST00000480067 VPS54Q9P1Q0 977 aa12.89□□□□□ -0.35
CLDN11-205ENST00000480067 NFIBO00712 420 aa12.88□□□□□ -0.35
CLDN11-205ENST00000480067 FKTNO75072 461 aa12.88□□□□□ -0.35
CLDN11-205ENST00000480067 PSMC4P43686 418 aa12.88□□□□□ -0.35
CLDN11-205ENST00000480067 MRPL12P52815 198 aaKnown RBP12.88□□□□□ -0.35
CLDN11-205ENST00000480067 FCGRTP55899 365 aa12.88□□□□□ -0.35
CLDN11-205ENST00000480067 KCTD2Q14681 263 aa12.88□□□□□ -0.35
CLDN11-205ENST00000480067 ARHGEF6Q15052 776 aa12.88□□□□□ -0.35
CLDN11-205ENST00000480067 PPP1R18Q6NYC8 613 aa12.88□□□□□ -0.35
CLDN11-205ENST00000480067 GPR142Q7Z601 462 aa12.88□□□□□ -0.35
CLDN11-205ENST00000480067 PLEKHH3Q7Z736 793 aa12.88□□□□□ -0.35
CLDN11-205ENST00000480067 SPRYD3Q8NCJ5 442 aa12.88□□□□□ -0.35
CLDN11-205ENST00000480067 CCDC148Q8NFR7 591 aa12.88□□□□□ -0.35
CLDN11-205ENST00000480067 ZNF296Q8WUU4 475 aaPredicted RBP12.88□□□□□ -0.35
CLDN11-205ENST00000480067 CLEC4DQ8WXI8 215 aa12.88□□□□□ -0.35
CLDN11-205ENST00000480067 AIFM3Q96NN9 605 aa12.88□□□□□ -0.35
CLDN11-205ENST00000480067 SMCO2A6NFE2 343 aa12.87□□□□□ -0.35
CLDN11-205ENST00000480067 TNPO2O14787 897 aaKnown RBP12.87□□□□□ -0.35
CLDN11-205ENST00000480067 CFBP00751 764 aa12.87□□□□□ -0.35
CLDN11-205ENST00000480067 GNA11P29992 359 aa12.87□□□□□ -0.35
CLDN11-205ENST00000480067 NLRP5P59047 1200 aa12.87□□□□□ -0.35
CLDN11-205ENST00000480067 TYW1BQ6NUM6 668 aa12.87□□□□□ -0.35
CLDN11-205ENST00000480067 NSMFQ6X4W1 530 aa12.87□□□□□ -0.35
CLDN11-205ENST00000480067 RNF207Q6ZRF8 634 aa12.87□□□□□ -0.35
CLDN11-205ENST00000480067 FAM177A1Q8N128 213 aaPredicted RBP12.87□□□□□ -0.35
CLDN11-205ENST00000480067 RGS22Q8NE09 1264 aa12.87□□□□□ -0.35
CLDN11-205ENST00000480067 ERO1AQ96HE7 468 aa12.87□□□□□ -0.35
CLDN11-205ENST00000480067 C8orf76Q96K31 380 aa12.87□□□□□ -0.35
CLDN11-205ENST00000480067 MMP19Q99542 508 aa12.87□□□□□ -0.35
CLDN11-205ENST00000480067 GLT8D2Q9H1C3 349 aa12.87□□□□□ -0.35
CLDN11-205ENST00000480067 C6orf50Q9HD87 102 aa12.87□□□□□ -0.35
CLDN11-205ENST00000480067 GCOM1H8Y6P7 765 aaPredicted RBP12.86□□□□□ -0.35
CLDN11-205ENST00000480067 POLR2MP0CAP2 368 aa12.86□□□□□ -0.35
CLDN11-205ENST00000480067 HSPA1AP0DMV8 641 aaKnown RBP12.86□□□□□ -0.35
CLDN11-205ENST00000480067 HSPA1BP0DMV9 641 aaKnown RBP12.86□□□□□ -0.35
CLDN11-205ENST00000480067 PTPREP23469 700 aa12.86□□□□□ -0.35
CLDN11-205ENST00000480067 CALML3P27482 149 aa12.86□□□□□ -0.35
CLDN11-205ENST00000480067 ADCY7P51828 1080 aa12.86□□□□□ -0.35
CLDN11-205ENST00000480067 LARP1BQ659C4 914 aaKnown RBP12.86□□□□□ -0.35
CLDN11-205ENST00000480067 ABRAQ8N0Z2 381 aa12.86□□□□□ -0.35
CLDN11-205ENST00000480067 CUL5Q93034 780 aa12.86□□□□□ -0.35
CLDN11-205ENST00000480067 PFASO15067 1338 aa12.86□□□□□ -0.35
CLDN11-205ENST00000480067 PARP14Q460N5 1801 aa12.86□□□□□ -0.35
CLDN11-205ENST00000480067 SLC15A5A6NIM6 579 aa12.86□□□□□ -0.35
CLDN11-205ENST00000480067 OPLAHO14841 1288 aa12.86□□□□□ -0.35
CLDN11-205ENST00000480067 PDCP20941 246 aa12.86□□□□□ -0.35
CLDN11-205ENST00000480067 HOXD10P28358 340 aa12.86□□□□□ -0.35
CLDN11-205ENST00000480067 FOSBP53539 338 aa12.86□□□□□ -0.35
CLDN11-205ENST00000480067 RPS6P62753 249 aaKnown RBP12.86□□□□□ -0.35
CLDN11-205ENST00000480067 BAATQ14032 418 aaPredicted RBP12.86□□□□□ -0.35
CLDN11-205ENST00000480067 GALNT17Q6IS24 598 aa12.86□□□□□ -0.35
CLDN11-205ENST00000480067 SAMD3Q8N6K7 520 aa12.86□□□□□ -0.35
CLDN11-205ENST00000480067 CD99L2Q8TCZ2 262 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms