RNA–Protein interactions for RNA: ENST00000479653.5

CCDC18-208, Transcript of coiled-coil domain containing 18, humanhuman

TSL 3

Gene CCDC18, Length 541 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18-208ENST00000479653 PTPN5P54829 565 aa13.46□□□□□ -0.25
CCDC18-208ENST00000479653 CNTN2Q02246 1040 aa13.46□□□□□ -0.25
CCDC18-208ENST00000479653 FAM47CQ5HY64 1035 aa13.46□□□□□ -0.25
CCDC18-208ENST00000479653 FAM9BQ8IZU0 186 aa13.46□□□□□ -0.25
CCDC18-208ENST00000479653 PRSS33Q8NF86 280 aa13.46□□□□□ -0.25
CCDC18-208ENST00000479653 CCDC17Q96LX7 622 aa13.46□□□□□ -0.25
CCDC18-208ENST00000479653 CRBNQ96SW2 442 aa13.46□□□□□ -0.25
CCDC18-208ENST00000479653 UPF3BQ9BZI7 483 aaKnown RBP13.46□□□□□ -0.25
CCDC18-208ENST00000479653 CCDC8Q9H0W5 538 aaPredicted RBP13.46□□□□□ -0.25
CCDC18-208ENST00000479653 KANSL2Q9H9L4 492 aa13.46□□□□□ -0.25
CCDC18-208ENST00000479653 MYH1P12882 1939 aa13.46□□□□□ -0.25
CCDC18-208ENST00000479653 ZDBF2Q9HCK1 2354 aa13.45□□□□□ -0.26
CCDC18-208ENST00000479653 GFRA3O60609 400 aa13.45□□□□□ -0.26
CCDC18-208ENST00000479653 GNAI2P04899 355 aa13.45□□□□□ -0.26
CCDC18-208ENST00000479653 IQCF3P0C7M6 154 aa13.45□□□□□ -0.26
CCDC18-208ENST00000479653 IER5LQ5T953 404 aa13.45□□□□□ -0.26
CCDC18-208ENST00000479653 EEPD1Q7L9B9 569 aa13.45□□□□□ -0.26
CCDC18-208ENST00000479653 PRPF38AQ8NAV1 312 aaKnown RBP13.45□□□□□ -0.26
CCDC18-208ENST00000479653 KIFC2Q96AC6 838 aa13.45□□□□□ -0.26
CCDC18-208ENST00000479653 TGS1Q96RS0 853 aaKnown RBP13.45□□□□□ -0.26
CCDC18-208ENST00000479653 DCP1AQ9NPI6 582 aaPredicted RBP13.45□□□□□ -0.26
CCDC18-208ENST00000479653 HOMER2Q9NSB8 354 aa13.45□□□□□ -0.26
CCDC18-208ENST00000479653 FBXO40Q9UH90 709 aa13.45□□□□□ -0.26
CCDC18-208ENST00000479653 FAM50BQ9Y247 325 aa13.45□□□□□ -0.26
CCDC18-208ENST00000479653 E9PSI1 815 aa13.44□□□□□ -0.26
CCDC18-208ENST00000479653 BAIAP3O94812 1187 aa13.44□□□□□ -0.26
CCDC18-208ENST00000479653 CDK8P49336 464 aa13.44□□□□□ -0.26
CCDC18-208ENST00000479653 ZP2Q05996 745 aa13.44□□□□□ -0.26
CCDC18-208ENST00000479653 NEK9Q8TD19 979 aa13.44□□□□□ -0.26
CCDC18-208ENST00000479653 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.44□□□□□ -0.26
CCDC18-208ENST00000479653 PDGFCQ9NRA1 345 aa13.44□□□□□ -0.26
CCDC18-208ENST00000479653 TLR7Q9NYK1 1049 aaKnown RBP13.44□□□□□ -0.26
CCDC18-208ENST00000479653 DBNLQ9UJU6 430 aaKnown RBP13.44□□□□□ -0.26
CCDC18-208ENST00000479653 ASB14A6NK59 587 aa13.43□□□□□ -0.26
CCDC18-208ENST00000479653 MYL3P08590 195 aa13.43□□□□□ -0.26
CCDC18-208ENST00000479653 ERVK-21P61565 698 aa13.43□□□□□ -0.26
CCDC18-208ENST00000479653 TMEM63BQ5T3F8 832 aa13.43□□□□□ -0.26
CCDC18-208ENST00000479653 SLC9C2Q5TAH2 1124 aa13.43□□□□□ -0.26
CCDC18-208ENST00000479653 IQSEC1Q6DN90 963 aa13.43□□□□□ -0.26
CCDC18-208ENST00000479653 TMED8Q6PL24 325 aaPredicted RBP13.43□□□□□ -0.26
CCDC18-208ENST00000479653 CHST13Q8NET6 341 aa13.43□□□□□ -0.26
CCDC18-208ENST00000479653 PPP1R13LQ8WUF5 828 aa13.43□□□□□ -0.26
CCDC18-208ENST00000479653 RAD9AQ99638 391 aa13.43□□□□□ -0.26
CCDC18-208ENST00000479653 GPHNQ9NQX3 736 aaPredicted RBP13.43□□□□□ -0.26
CCDC18-208ENST00000479653 PRKAG3Q9UGI9 489 aa13.43□□□□□ -0.26
CCDC18-208ENST00000479653 MUTYHQ9UIF7 546 aa13.43□□□□□ -0.26
CCDC18-208ENST00000479653 NOD1Q9Y239 953 aa13.43□□□□□ -0.26
CCDC18-208ENST00000479653 DDX49Q9Y6V7 483 aaKnown RBP13.43□□□□□ -0.26
CCDC18-208ENST00000479653 TRIOO75962 3097 aa13.43□□□□□ -0.26
CCDC18-208ENST00000479653 ATP2A1O14983 1001 aa13.42□□□□□ -0.26
CCDC18-208ENST00000479653 SURF6O75683 361 aaKnown RBP13.42□□□□□ -0.26
CCDC18-208ENST00000479653 IRS1P35568 1242 aa13.42□□□□□ -0.26
CCDC18-208ENST00000479653 WDR5P61964 334 aaKnown RBP13.42□□□□□ -0.26
CCDC18-208ENST00000479653 FAM117BQ6P1L5 589 aa13.42□□□□□ -0.26
CCDC18-208ENST00000479653 KIAA1211Q6ZU35 1233 aa13.42□□□□□ -0.26
CCDC18-208ENST00000479653 ADHFE1Q8IWW8 467 aa13.42□□□□□ -0.26
CCDC18-208ENST00000479653 FAM86C1Q9NVL1 165 aa13.42□□□□□ -0.26
CCDC18-208ENST00000479653 POLR3EQ9NVU0 708 aa13.42□□□□□ -0.26
CCDC18-208ENST00000479653 COG6Q9Y2V7 657 aa13.42□□□□□ -0.26
CCDC18-208ENST00000479653 Q9Y3F1 56 aa13.42□□□□□ -0.26
CCDC18-208ENST00000479653 CYP2D7A0A087X1C5 515 aa13.41□□□□□ -0.26
CCDC18-208ENST00000479653 LINC01553A4QN01 128 aa13.41□□□□□ -0.26
CCDC18-208ENST00000479653 SOWAHBA6NEL2 793 aa13.41□□□□□ -0.26
CCDC18-208ENST00000479653 C19orf67A6NJJ6 358 aa13.41□□□□□ -0.26
CCDC18-208ENST00000479653 USP17L12C9JPN9 530 aa13.41□□□□□ -0.26
CCDC18-208ENST00000479653 USP17L21D6R901 530 aa13.41□□□□□ -0.26
CCDC18-208ENST00000479653 F5H6K3 240 aa13.41□□□□□ -0.26
CCDC18-208ENST00000479653 PITPNM1O00562 1244 aa13.41□□□□□ -0.26
CCDC18-208ENST00000479653 CHMP4BP1P59074 171 aa13.41□□□□□ -0.26
CCDC18-208ENST00000479653 DEFB103AP81534 67 aa13.41□□□□□ -0.26
CCDC18-208ENST00000479653 KLRC3Q07444 240 aa13.41□□□□□ -0.26
CCDC18-208ENST00000479653 BFSP2Q13515 415 aa13.41□□□□□ -0.26
CCDC18-208ENST00000479653 NBPF20Q3BBV1 942 aa13.41□□□□□ -0.26
CCDC18-208ENST00000479653 FBXO16Q8IX29 292 aaPredicted RBP13.41□□□□□ -0.26
CCDC18-208ENST00000479653 AMOTL1Q8IY63 956 aa13.41□□□□□ -0.26
CCDC18-208ENST00000479653 LCORLQ8N3X6 602 aa13.41□□□□□ -0.26
CCDC18-208ENST00000479653 FAM133AQ8N9E0 248 aa13.41□□□□□ -0.26
CCDC18-208ENST00000479653 FBXO22Q8NEZ5 403 aa13.41□□□□□ -0.26
CCDC18-208ENST00000479653 PBXIP1Q96AQ6 731 aa13.41□□□□□ -0.26
CCDC18-208ENST00000479653 PRRX2Q99811 253 aa13.41□□□□□ -0.26
CCDC18-208ENST00000479653 CTNNA3Q9UI47 895 aa13.41□□□□□ -0.26
CCDC18-208ENST00000479653 SPTBN4Q9H254 2564 aa13.4□□□□□ -0.26
CCDC18-208ENST00000479653 PRKAB2O43741 272 aa13.4□□□□□ -0.26
CCDC18-208ENST00000479653 PDE6AP16499 860 aa13.4□□□□□ -0.26
CCDC18-208ENST00000479653 PURAQ00577 322 aaKnown RBP13.4□□□□□ -0.26
CCDC18-208ENST00000479653 TCF15Q12870 199 aa13.4□□□□□ -0.26
CCDC18-208ENST00000479653 PTPROQ16827 1216 aa13.4□□□□□ -0.26
CCDC18-208ENST00000479653 TAPT1Q6NXT6 567 aa13.4□□□□□ -0.26
CCDC18-208ENST00000479653 SUGP1Q8IWZ8 645 aaKnown RBP13.4□□□□□ -0.26
CCDC18-208ENST00000479653 EAF2Q96CJ1 260 aaPredicted RBP13.4□□□□□ -0.26
CCDC18-208ENST00000479653 C17orf80Q9BSJ5 609 aa13.4□□□□□ -0.26
CCDC18-208ENST00000479653 MTG1Q9BT17 334 aaPredicted RBP13.4□□□□□ -0.26
CCDC18-208ENST00000479653 ARMT1Q9H993 441 aa13.4□□□□□ -0.26
CCDC18-208ENST00000479653 SLC38A10Q9HBR0 1119 aa13.4□□□□□ -0.26
CCDC18-208ENST00000479653 ZNF532Q9HCE3 1301 aa13.39□□□□□ -0.27
CCDC18-208ENST00000479653 COL11A1P12107 1806 aaPredicted RBP13.39□□□□□ -0.27
CCDC18-208ENST00000479653 GJB5O95377 273 aa13.39□□□□□ -0.27
CCDC18-208ENST00000479653 NDUFB10O96000 172 aa13.39□□□□□ -0.27
CCDC18-208ENST00000479653 SLFN5Q08AF3 891 aa13.39□□□□□ -0.27
CCDC18-208ENST00000479653 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms