RNA–Protein interactions for RNA: ENST00000479511.1

GAPVD1-217, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 575 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-217ENST00000479511 FBXO11Q86XK2 927 aa9.61□□□□□ -0.87
GAPVD1-217ENST00000479511 DCAF4Q8WV16 495 aa9.61□□□□□ -0.87
GAPVD1-217ENST00000479511 EVI5LQ96CN4 794 aa9.61□□□□□ -0.87
GAPVD1-217ENST00000479511 MCMBPQ9BTE3 642 aa9.61□□□□□ -0.87
GAPVD1-217ENST00000479511 PCGF6Q9BYE7 350 aa9.61□□□□□ -0.87
GAPVD1-217ENST00000479511 RNF208Q9H0X6 261 aa9.61□□□□□ -0.87
GAPVD1-217ENST00000479511 VTA1Q9NP79 307 aa9.61□□□□□ -0.87
GAPVD1-217ENST00000479511 IP6K2Q9UHH9 426 aa9.61□□□□□ -0.87
GAPVD1-217ENST00000479511 PCOLCE2Q9UKZ9 415 aa9.61□□□□□ -0.87
GAPVD1-217ENST00000479511 NESP48681 1621 aa9.6□□□□□ -0.87
GAPVD1-217ENST00000479511 ARNTLO00327 626 aa9.6□□□□□ -0.87
GAPVD1-217ENST00000479511 AQP7O14520 342 aa9.6□□□□□ -0.87
GAPVD1-217ENST00000479511 LDHAP00338 332 aaKnown RBP9.6□□□□□ -0.87
GAPVD1-217ENST00000479511 CPP00450 1065 aa9.6□□□□□ -0.87
GAPVD1-217ENST00000479511 F2P00734 622 aa9.6□□□□□ -0.87
GAPVD1-217ENST00000479511 DSG1Q02413 1049 aa9.6□□□□□ -0.87
GAPVD1-217ENST00000479511 SRSF11Q05519 484 aaKnown RBP9.6□□□□□ -0.87
GAPVD1-217ENST00000479511 TCIRG1Q13488 830 aa9.6□□□□□ -0.87
GAPVD1-217ENST00000479511 HDAC1Q13547 482 aaPredicted RBP9.6□□□□□ -0.87
GAPVD1-217ENST00000479511 CYB5RLQ6IPT4 315 aa9.6□□□□□ -0.87
GAPVD1-217ENST00000479511 KIF18BQ86Y91 864 aa9.6□□□□□ -0.87
GAPVD1-217ENST00000479511 DTWD1Q8N5C7 304 aa9.6□□□□□ -0.87
GAPVD1-217ENST00000479511 C12orf50Q8NA57 414 aaPredicted RBP9.6□□□□□ -0.87
GAPVD1-217ENST00000479511 SMC1BQ8NDV3 1235 aa9.6□□□□□ -0.87
GAPVD1-217ENST00000479511 RNF141Q8WVD5 230 aa9.6□□□□□ -0.87
GAPVD1-217ENST00000479511 ASPNQ9BXN1 380 aa9.6□□□□□ -0.87
GAPVD1-217ENST00000479511 MINPP1Q9UNW1 487 aa9.6□□□□□ -0.87
GAPVD1-217ENST00000479511 FKBP9O95302 570 aa9.59□□□□□ -0.87
GAPVD1-217ENST00000479511 IL2P60568 153 aa9.59□□□□□ -0.87
GAPVD1-217ENST00000479511 AMPD2Q01433 879 aa9.59□□□□□ -0.87
GAPVD1-217ENST00000479511 PTPN21Q16825 1174 aa9.59□□□□□ -0.87
GAPVD1-217ENST00000479511 FKBP9P1Q75LS8 142 aa9.59□□□□□ -0.87
GAPVD1-217ENST00000479511 DDX53Q86TM3 631 aaKnown RBP9.59□□□□□ -0.87
GAPVD1-217ENST00000479511 FAM9AQ8IZU1 332 aaPredicted RBP9.59□□□□□ -0.87
GAPVD1-217ENST00000479511 IGSF22Q8N9C0 903 aa9.59□□□□□ -0.87
GAPVD1-217ENST00000479511 PRDM16Q9HAZ2 1276 aa9.59□□□□□ -0.87
GAPVD1-217ENST00000479511 NCAPD3P42695 1498 aa9.59□□□□□ -0.87
GAPVD1-217ENST00000479511 WDR64B1ANS9 1081 aa9.58□□□□□ -0.88
GAPVD1-217ENST00000479511 H0Y8X5 98 aa9.58□□□□□ -0.88
GAPVD1-217ENST00000479511 TRAF5O00463 557 aa9.58□□□□□ -0.88
GAPVD1-217ENST00000479511 TERTO14746 1132 aaKnown RBP9.58□□□□□ -0.88
GAPVD1-217ENST00000479511 PDE6BP35913 854 aa9.58□□□□□ -0.88
GAPVD1-217ENST00000479511 IARSP41252 1262 aaKnown RBP9.58□□□□□ -0.88
GAPVD1-217ENST00000479511 KRT76Q01546 638 aa9.58□□□□□ -0.88
GAPVD1-217ENST00000479511 SCRN1Q12765 414 aa9.58□□□□□ -0.88
GAPVD1-217ENST00000479511 INAVAQ3KP66 663 aa9.58□□□□□ -0.88
GAPVD1-217ENST00000479511 TRAPPC3LQ5T215 181 aa9.58□□□□□ -0.88
GAPVD1-217ENST00000479511 IQSEC1Q6DN90 963 aa9.58□□□□□ -0.88
GAPVD1-217ENST00000479511 TMC3Q7Z5M5 1100 aa9.58□□□□□ -0.88
GAPVD1-217ENST00000479511 TPH2Q8IWU9 490 aa9.58□□□□□ -0.88
GAPVD1-217ENST00000479511 SAMD3Q8N6K7 520 aa9.58□□□□□ -0.88
GAPVD1-217ENST00000479511 GPR101Q96P66 508 aaPredicted RBP9.58□□□□□ -0.88
GAPVD1-217ENST00000479511 PHF20Q9BVI0 1012 aa9.58□□□□□ -0.88
GAPVD1-217ENST00000479511 LUC7LQ9NQ29 371 aaKnown RBP9.58□□□□□ -0.88
GAPVD1-217ENST00000479511 ENAMQ9NRM1 1142 aa9.58□□□□□ -0.88
GAPVD1-217ENST00000479511 LUC7L2Q9Y383 392 aaKnown RBP9.58□□□□□ -0.88
GAPVD1-217ENST00000479511 LAMC3Q9Y6N6 1575 aa9.58□□□□□ -0.88
GAPVD1-217ENST00000479511 PDS5BQ9NTI5 1447 aa9.57□□□□□ -0.88
GAPVD1-217ENST00000479511 H3BM21 787 aa9.57□□□□□ -0.88
GAPVD1-217ENST00000479511 FZD9O00144 591 aa9.57□□□□□ -0.88
GAPVD1-217ENST00000479511 OIP5O43482 229 aa9.57□□□□□ -0.88
GAPVD1-217ENST00000479511 ADAMTS2O95450 1211 aa9.57□□□□□ -0.88
GAPVD1-217ENST00000479511 ERVK-21P61565 698 aa9.57□□□□□ -0.88
GAPVD1-217ENST00000479511 OS9Q13438 667 aaPredicted RBP9.57□□□□□ -0.88
GAPVD1-217ENST00000479511 GFOD2Q3B7J2 385 aa9.57□□□□□ -0.88
GAPVD1-217ENST00000479511 GPAT2Q6NUI2 795 aa9.57□□□□□ -0.88
GAPVD1-217ENST00000479511 MTDHQ86UE4 582 aaKnown RBP9.57□□□□□ -0.88
GAPVD1-217ENST00000479511 DGKHQ86XP1 1220 aa9.57□□□□□ -0.88
GAPVD1-217ENST00000479511 FMR1NBQ8N0W7 255 aaPredicted RBP9.57□□□□□ -0.88
GAPVD1-217ENST00000479511 FRS2Q8WU20 508 aa9.57□□□□□ -0.88
GAPVD1-217ENST00000479511 FUBP3Q96I24 572 aaKnown RBP eCLIP9.57□□□□□ -0.88
GAPVD1-217ENST00000479511 MENTQ9BUN1 341 aa9.57□□□□□ -0.88
GAPVD1-217ENST00000479511 NXF1Q9UBU9 619 aaKnown RBP9.57□□□□□ -0.88
GAPVD1-217ENST00000479511 TMEFF2Q9UIK5 374 aaPredicted RBP9.57□□□□□ -0.88
GAPVD1-217ENST00000479511 COQ6Q9Y2Z9 468 aa9.57□□□□□ -0.88
GAPVD1-217ENST00000479511 CNTNAP4Q9C0A0 1308 aa9.56□□□□□ -0.88
GAPVD1-217ENST00000479511 A0A0A0MRY4 1105 aa9.56□□□□□ -0.88
GAPVD1-217ENST00000479511 GOLGA6CA6NDK9 693 aa9.56□□□□□ -0.88
GAPVD1-217ENST00000479511 GOLGA6BA6NDN3 693 aa9.56□□□□□ -0.88
GAPVD1-217ENST00000479511 K7ESF4 209 aa9.56□□□□□ -0.88
GAPVD1-217ENST00000479511 ARVCFO00192 962 aa9.56□□□□□ -0.88
GAPVD1-217ENST00000479511 MSCO60682 206 aa9.56□□□□□ -0.88
GAPVD1-217ENST00000479511 MT-CO1P00395 513 aa9.56□□□□□ -0.88
GAPVD1-217ENST00000479511 CKMP06732 381 aa9.56□□□□□ -0.88
GAPVD1-217ENST00000479511 THBDP07204 575 aa9.56□□□□□ -0.88
GAPVD1-217ENST00000479511 GOLGA6DP0CG33 693 aa9.56□□□□□ -0.88
GAPVD1-217ENST00000479511 MYBL2P10244 700 aa9.56□□□□□ -0.88
GAPVD1-217ENST00000479511 ITIH2P19823 946 aa9.56□□□□□ -0.88
GAPVD1-217ENST00000479511 ETV3P41162 512 aa9.56□□□□□ -0.88
GAPVD1-217ENST00000479511 ATP13A4Q4VNC1 1196 aa9.56□□□□□ -0.88
GAPVD1-217ENST00000479511 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.56□□□□□ -0.88
GAPVD1-217ENST00000479511 PPIL6Q8IXY8 311 aa9.56□□□□□ -0.88
GAPVD1-217ENST00000479511 NPLOC4Q8TAT6 608 aa9.56□□□□□ -0.88
GAPVD1-217ENST00000479511 DCAF11Q8TEB1 546 aa9.56□□□□□ -0.88
GAPVD1-217ENST00000479511 IL17RAQ96F46 866 aa9.56□□□□□ -0.88
GAPVD1-217ENST00000479511 ACSS3Q9H6R3 686 aa9.56□□□□□ -0.88
GAPVD1-217ENST00000479511 EMC7Q9NPA0 242 aa9.56□□□□□ -0.88
GAPVD1-217ENST00000479511 GPRC5CQ9NQ84 441 aa9.56□□□□□ -0.88
GAPVD1-217ENST00000479511 SPTLC3Q9NUV7 552 aa9.56□□□□□ -0.88
GAPVD1-217ENST00000479511 THG1LQ9NWX6 298 aaKnown RBP9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms