RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 CHST7Q9NS84 486 aa7.58□□□□□ -1.2
CCDC171-207ENST00000478913 PRR13Q9NZ81 148 aa7.58□□□□□ -1.2
CCDC171-207ENST00000478913 CCDC39Q9UFE4 941 aa7.58□□□□□ -1.2
CCDC171-207ENST00000478913 STRCP1A6NGW2 1772 aa7.57□□□□□ -1.2
CCDC171-207ENST00000478913 ANKRD34BA5PLL1 514 aa7.57□□□□□ -1.2
CCDC171-207ENST00000478913 ZNF143P52747 638 aaPredicted RBP7.57□□□□□ -1.2
CCDC171-207ENST00000478913 BNIP3Q12983 259 aa7.57□□□□□ -1.2
CCDC171-207ENST00000478913 IKZF1Q13422 519 aa7.57□□□□□ -1.2
CCDC171-207ENST00000478913 MRM1Q6IN84 353 aaKnown RBP7.57□□□□□ -1.2
CCDC171-207ENST00000478913 FLCNQ8NFG4 579 aa7.57□□□□□ -1.2
CCDC171-207ENST00000478913 SYTL5Q8TDW5 730 aaPredicted RBP7.57□□□□□ -1.2
CCDC171-207ENST00000478913 FGD4Q96M96 766 aa7.57□□□□□ -1.2
CCDC171-207ENST00000478913 HDAC8Q9BY41 377 aa7.57□□□□□ -1.2
CCDC171-207ENST00000478913 WHRNQ9P202 907 aa7.57□□□□□ -1.2
CCDC171-207ENST00000478913 WRNQ14191 1432 aaPredicted RBP eCLIP7.57□□□□□ -1.2
CCDC171-207ENST00000478913 SUPT6HQ7KZ85 1726 aaKnown RBP7.56□□□□□ -1.2
CCDC171-207ENST00000478913 CCDC85CA6NKD9 419 aa7.56□□□□□ -1.2
CCDC171-207ENST00000478913 MEIS1O00470 390 aa7.56□□□□□ -1.2
CCDC171-207ENST00000478913 KCNQ2O43526 872 aa7.56□□□□□ -1.2
CCDC171-207ENST00000478913 PPM1BO75688 479 aa7.56□□□□□ -1.2
CCDC171-207ENST00000478913 LTKP29376 864 aa7.56□□□□□ -1.2
CCDC171-207ENST00000478913 CD96P40200 585 aa7.56□□□□□ -1.2
CCDC171-207ENST00000478913 SERINC3Q13530 473 aa7.56□□□□□ -1.2
CCDC171-207ENST00000478913 ANGEL2Q5VTE6 544 aaKnown RBP7.56□□□□□ -1.2
CCDC171-207ENST00000478913 EEPD1Q7L9B9 569 aa7.56□□□□□ -1.2
CCDC171-207ENST00000478913 TMPRSS7Q7RTY8 843 aa7.56□□□□□ -1.2
CCDC171-207ENST00000478913 ZNF655Q8N720 491 aaPredicted RBP7.56□□□□□ -1.2
CCDC171-207ENST00000478913 DAGLBQ8NCG7 672 aa7.56□□□□□ -1.2
CCDC171-207ENST00000478913 BRF1Q92994 677 aa7.56□□□□□ -1.2
CCDC171-207ENST00000478913 DUSP13Q9UII6 198 aa7.56□□□□□ -1.2
CCDC171-207ENST00000478913 SUGT1Q9Y2Z0 365 aa7.56□□□□□ -1.2
CCDC171-207ENST00000478913 AATKQ6ZMQ8 1374 aa7.56□□□□□ -1.2
CCDC171-207ENST00000478913 CNTLNQ9NXG0 1405 aa7.55□□□□□ -1.2
CCDC171-207ENST00000478913 WASH4PA8MWX3 477 aa7.55□□□□□ -1.2
CCDC171-207ENST00000478913 SUSD5O60279 629 aa7.55□□□□□ -1.2
CCDC171-207ENST00000478913 ZNF445P59923 1031 aa7.55□□□□□ -1.2
CCDC171-207ENST00000478913 ZNF574Q6ZN55 896 aaPredicted RBP7.55□□□□□ -1.2
CCDC171-207ENST00000478913 CREG2Q8IUH2 290 aa7.55□□□□□ -1.2
CCDC171-207ENST00000478913 ADCY4Q8NFM4 1077 aa7.55□□□□□ -1.2
CCDC171-207ENST00000478913 APBA2Q99767 749 aa7.55□□□□□ -1.2
CCDC171-207ENST00000478913 OSBPL2Q9H1P3 480 aa7.55□□□□□ -1.2
CCDC171-207ENST00000478913 NOL6Q9H6R4 1146 aaKnown RBP7.55□□□□□ -1.2
CCDC171-207ENST00000478913 SUSD2Q9UGT4 822 aa7.55□□□□□ -1.2
CCDC171-207ENST00000478913 MINPP1Q9UNW1 487 aa7.55□□□□□ -1.2
CCDC171-207ENST00000478913 FHOD1Q9Y613 1164 aa7.55□□□□□ -1.2
CCDC171-207ENST00000478913 DISP1Q96F81 1524 aa7.54□□□□□ -1.2
CCDC171-207ENST00000478913 ABCA9Q8IUA7 1624 aa7.54□□□□□ -1.2
CCDC171-207ENST00000478913 WNT11O96014 354 aa7.54□□□□□ -1.2
CCDC171-207ENST00000478913 CD8BP10966 210 aa7.54□□□□□ -1.2
CCDC171-207ENST00000478913 GAB4Q2WGN9 574 aa7.54□□□□□ -1.2
CCDC171-207ENST00000478913 SPRED2Q7Z698 418 aa7.54□□□□□ -1.2
CCDC171-207ENST00000478913 FIBCD1Q8N539 461 aa7.54□□□□□ -1.2
CCDC171-207ENST00000478913 PPP1R14AQ96A00 147 aa7.54□□□□□ -1.2
CCDC171-207ENST00000478913 TCTN2Q96GX1 697 aa7.54□□□□□ -1.2
CCDC171-207ENST00000478913 LNPKQ9C0E8 428 aa7.54□□□□□ -1.2
CCDC171-207ENST00000478913 MSRB2Q9Y3D2 182 aa7.54□□□□□ -1.2
CCDC171-207ENST00000478913 TMEM94Q12767 1356 aa7.54□□□□□ -1.2
CCDC171-207ENST00000478913 A0A087WZG4 1122 aa7.53□□□□□ -1.2
CCDC171-207ENST00000478913 HTRA3P83110 453 aa7.53□□□□□ -1.2
CCDC171-207ENST00000478913 PPP2R5DQ14738 602 aa7.53□□□□□ -1.2
CCDC171-207ENST00000478913 SV2CQ496J9 727 aa7.53□□□□□ -1.2
CCDC171-207ENST00000478913 CWF19L1Q69YN2 538 aaKnown RBP7.53□□□□□ -1.2
CCDC171-207ENST00000478913 JMYQ8N9B5 988 aa7.53□□□□□ -1.2
CCDC171-207ENST00000478913 DEPDC7Q96QD5 511 aa7.53□□□□□ -1.2
CCDC171-207ENST00000478913 SRPK1Q96SB4 655 aaKnown RBP7.53□□□□□ -1.2
CCDC171-207ENST00000478913 APEX2Q9UBZ4 518 aa7.53□□□□□ -1.2
CCDC171-207ENST00000478913 SF3B6Q9Y3B4 125 aaKnown RBP7.53□□□□□ -1.2
CCDC171-207ENST00000478913 SYNMO15061 1565 aa7.53□□□□□ -1.2
CCDC171-207ENST00000478913 SCAPERQ9BY12 1400 aa7.52□□□□□ -1.2
CCDC171-207ENST00000478913 COL16A1Q07092 1604 aaPredicted RBP7.52□□□□□ -1.2
CCDC171-207ENST00000478913 MYO3AQ8NEV4 1616 aa7.52□□□□□ -1.2
CCDC171-207ENST00000478913 SSU72P8A0A1W2PR75 194 aa7.52□□□□□ -1.21
CCDC171-207ENST00000478913 PDPK1O15530 556 aa7.52□□□□□ -1.21
CCDC171-207ENST00000478913 ESR1P03372 595 aa7.52□□□□□ -1.21
CCDC171-207ENST00000478913 GSNP06396 782 aa7.52□□□□□ -1.21
CCDC171-207ENST00000478913 PCBP3P57721 371 aaKnown RBP7.52□□□□□ -1.21
CCDC171-207ENST00000478913 ZP2Q05996 745 aa7.52□□□□□ -1.21
CCDC171-207ENST00000478913 EGR3Q06889 387 aa7.52□□□□□ -1.21
CCDC171-207ENST00000478913 CRTC3Q6UUV7 619 aa7.52□□□□□ -1.21
CCDC171-207ENST00000478913 WFDC3Q8IUB2 231 aa7.52□□□□□ -1.21
CCDC171-207ENST00000478913 TP53INP2Q8IXH6 220 aa7.52□□□□□ -1.21
CCDC171-207ENST00000478913 CRACR2BQ8N4Y2 399 aaPredicted RBP7.52□□□□□ -1.21
CCDC171-207ENST00000478913 ZNF526Q8TF50 670 aaPredicted RBP7.52□□□□□ -1.21
CCDC171-207ENST00000478913 MKL1Q969V6 931 aa7.52□□□□□ -1.21
CCDC171-207ENST00000478913 ZDHHC15Q96MV8 337 aa7.52□□□□□ -1.21
CCDC171-207ENST00000478913 FMNL2Q96PY5 1086 aa7.52□□□□□ -1.21
CCDC171-207ENST00000478913 CCDC113Q9H0I3 377 aa7.52□□□□□ -1.21
CCDC171-207ENST00000478913 EPN3Q9H201 632 aa7.52□□□□□ -1.21
CCDC171-207ENST00000478913 CARS2Q9HA77 564 aaKnown RBP7.52□□□□□ -1.21
CCDC171-207ENST00000478913 DIS3Q9Y2L1 958 aaKnown RBP7.52□□□□□ -1.21
CCDC171-207ENST00000478913 PCDHA11Q9Y5I1 949 aa7.52□□□□□ -1.21
CCDC171-207ENST00000478913 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.52□□□□□ -1.21
CCDC171-207ENST00000478913 A2ML1A8K2U0 1454 aa7.51□□□□□ -1.21
CCDC171-207ENST00000478913 H0Y8X5 98 aa7.51□□□□□ -1.21
CCDC171-207ENST00000478913 AGRPO00253 132 aa7.51□□□□□ -1.21
CCDC171-207ENST00000478913 NOP56O00567 594 aaKnown RBP7.51□□□□□ -1.21
CCDC171-207ENST00000478913 CTSKP43235 329 aa7.51□□□□□ -1.21
CCDC171-207ENST00000478913 RASGRF1Q13972 1273 aa7.51□□□□□ -1.21
CCDC171-207ENST00000478913 RASA3Q14644 834 aa7.51□□□□□ -1.21
CCDC171-207ENST00000478913 BMS1Q14692 1282 aaKnown RBP7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms