RNA–Protein interactions for RNA: ENST00000478603.5

C9orf3-216, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-216ENST00000478603 PURBQ96QR8 312 aaKnown RBP26.87■■□□□ 1.89
C9orf3-216ENST00000478603 RNF41Q9H4P4 317 aaPredicted RBP26.87■■□□□ 1.89
C9orf3-216ENST00000478603 STARD7Q9NQZ5 370 aa26.87■■□□□ 1.89
C9orf3-216ENST00000478603 C11orf97A0A1B0GVM6 126 aaPredicted RBP26.86■■□□□ 1.89
C9orf3-216ENST00000478603 GPR153Q6NV75 609 aa26.86■■□□□ 1.89
C9orf3-216ENST00000478603 DEFB123Q8N688 67 aa26.86■■□□□ 1.89
C9orf3-216ENST00000478603 MOXD2PA6NHM9 499 aa26.85■■□□□ 1.89
C9orf3-216ENST00000478603 ASB14A6NK59 587 aa26.85■■□□□ 1.89
C9orf3-216ENST00000478603 CLTBP09497 229 aa26.85■■□□□ 1.89
C9orf3-216ENST00000478603 ITGB8P26012 769 aa26.85■■□□□ 1.89
C9orf3-216ENST00000478603 CST5P28325 142 aaPredicted RBP26.85■■□□□ 1.89
C9orf3-216ENST00000478603 NUP133Q8WUM0 1156 aa26.85■■□□□ 1.89
C9orf3-216ENST00000478603 ESR2Q92731 530 aa26.85■■□□□ 1.89
C9orf3-216ENST00000478603 TTC14Q96N46 770 aa26.85■■□□□ 1.89
C9orf3-216ENST00000478603 UPF3AQ9H1J1 476 aaKnown RBP26.85■■□□□ 1.89
C9orf3-216ENST00000478603 HIP1O00291 1037 aa26.84■■□□□ 1.89
C9orf3-216ENST00000478603 PDE4AP27815 886 aa26.84■■□□□ 1.89
C9orf3-216ENST00000478603 GJA9P57773 515 aa26.84■■□□□ 1.89
C9orf3-216ENST00000478603 IRX6P78412 446 aaPredicted RBP26.84■■□□□ 1.89
C9orf3-216ENST00000478603 ZNF543Q08ER8 600 aa26.84■■□□□ 1.89
C9orf3-216ENST00000478603 SPC25Q9HBM1 224 aa26.84■■□□□ 1.89
C9orf3-216ENST00000478603 NFIBO00712 420 aa26.83■■□□□ 1.89
C9orf3-216ENST00000478603 ASGR1P07306 291 aa26.83■■□□□ 1.89
C9orf3-216ENST00000478603 PTGS1P23219 599 aa26.83■■□□□ 1.89
C9orf3-216ENST00000478603 TNFAIP2Q03169 654 aa26.83■■□□□ 1.89
C9orf3-216ENST00000478603 SHHQ15465 462 aa26.83■■□□□ 1.89
C9orf3-216ENST00000478603 GNASQ5JWF2 1037 aa26.83■■□□□ 1.89
C9orf3-216ENST00000478603 C9orf50Q5SZB4 431 aa26.83■■□□□ 1.89
C9orf3-216ENST00000478603 NOL8Q76FK4 1167 aaKnown RBP26.83■■□□□ 1.89
C9orf3-216ENST00000478603 EEPD1Q7L9B9 569 aa26.83■■□□□ 1.89
C9orf3-216ENST00000478603 CTAGE5O15320 804 aa26.82■■□□□ 1.88
C9orf3-216ENST00000478603 KDM4AO75164 1064 aa26.82■■□□□ 1.88
C9orf3-216ENST00000478603 SNHG28P0DPA3 235 aa26.82■■□□□ 1.88
C9orf3-216ENST00000478603 BEX3Q00994 111 aa26.82■■□□□ 1.88
C9orf3-216ENST00000478603 BAATQ14032 418 aaPredicted RBP26.82■■□□□ 1.88
C9orf3-216ENST00000478603 FBXO16Q8IX29 292 aaPredicted RBP26.82■■□□□ 1.88
C9orf3-216ENST00000478603 PCSK9Q8NBP7 692 aaKnown RBP26.82■■□□□ 1.88
C9orf3-216ENST00000478603 GLT1D1Q96MS3 346 aa26.82■■□□□ 1.88
C9orf3-216ENST00000478603 DSCC1Q9BVC3 393 aa26.82■■□□□ 1.88
C9orf3-216ENST00000478603 IL25Q9H293 177 aa26.82■■□□□ 1.88
C9orf3-216ENST00000478603 PDGFCQ9NRA1 345 aa26.82■■□□□ 1.88
C9orf3-216ENST00000478603 B4E1Z4 1266 aa26.81■■□□□ 1.88
C9orf3-216ENST00000478603 GOLGA8HP0CJ92 632 aa26.81■■□□□ 1.88
C9orf3-216ENST00000478603 FAAP100Q0VG06 881 aa26.81■■□□□ 1.88
C9orf3-216ENST00000478603 ANKRD33Q7Z3H0 272 aa26.81■■□□□ 1.88
C9orf3-216ENST00000478603 VTI1AQ96AJ9 217 aa26.81■■□□□ 1.88
C9orf3-216ENST00000478603 TMEM39AQ9NV64 488 aa26.81■■□□□ 1.88
C9orf3-216ENST00000478603 KIAA0355O15063 1070 aa26.8■■□□□ 1.88
C9orf3-216ENST00000478603 DGKHQ86XP1 1220 aa26.8■■□□□ 1.88
C9orf3-216ENST00000478603 CPVLQ9H3G5 476 aa26.8■■□□□ 1.88
C9orf3-216ENST00000478603 GNEQ9Y223 722 aaKnown RBP26.8■■□□□ 1.88
C9orf3-216ENST00000478603 PTPDC1A2A3K4 754 aa26.79■■□□□ 1.88
C9orf3-216ENST00000478603 DCDC2CA8MYV0 355 aa26.79■■□□□ 1.88
C9orf3-216ENST00000478603 GSPT1P15170 499 aaKnown RBP26.79■■□□□ 1.88
C9orf3-216ENST00000478603 RAG1P15918 1043 aa26.79■■□□□ 1.88
C9orf3-216ENST00000478603 SMPD1P17405 629 aa26.79■■□□□ 1.88
C9orf3-216ENST00000478603 TMEM63BQ5T3F8 832 aa26.79■■□□□ 1.88
C9orf3-216ENST00000478603 TLK2Q86UE8 772 aa26.79■■□□□ 1.88
C9orf3-216ENST00000478603 CLEC4DQ8WXI8 215 aa26.79■■□□□ 1.88
C9orf3-216ENST00000478603 TOX2Q96NM4 488 aa26.79■■□□□ 1.88
C9orf3-216ENST00000478603 MTMR10Q9NXD2 777 aa26.79■■□□□ 1.88
C9orf3-216ENST00000478603 ELP1O95163 1332 aa26.79■■□□□ 1.88
C9orf3-216ENST00000478603 IMMTQ16891 758 aaKnown RBP26.78■■□□□ 1.88
C9orf3-216ENST00000478603 TTC22Q5TAA0 569 aa26.78■■□□□ 1.88
C9orf3-216ENST00000478603 TAPT1Q6NXT6 567 aa26.78■■□□□ 1.88
C9orf3-216ENST00000478603 SLC30A10Q6XR72 485 aa26.78■■□□□ 1.88
C9orf3-216ENST00000478603 IQCA1Q86XH1 822 aa26.78■■□□□ 1.88
C9orf3-216ENST00000478603 UBA5Q9GZZ9 404 aa26.78■■□□□ 1.88
C9orf3-216ENST00000478603 CALML3P27482 149 aa26.77■■□□□ 1.88
C9orf3-216ENST00000478603 ALDH5A1P51649 535 aaPredicted RBP26.77■■□□□ 1.88
C9orf3-216ENST00000478603 EPHB4P54760 987 aa26.77■■□□□ 1.88
C9orf3-216ENST00000478603 NKX3-2P78367 333 aa26.77■■□□□ 1.88
C9orf3-216ENST00000478603 PNMA1Q8ND90 353 aa26.77■■□□□ 1.88
C9orf3-216ENST00000478603 ZSWIM5Q9P217 1185 aa26.77■■□□□ 1.88
C9orf3-216ENST00000478603 LAMA2P24043 3122 aaKnown RBP26.77■■□□□ 1.88
C9orf3-216ENST00000478603 COL6A3P12111 3177 aa26.76■■□□□ 1.87
C9orf3-216ENST00000478603 A0A0U1RQG5 324 aaPredicted RBP26.76■■□□□ 1.87
C9orf3-216ENST00000478603 DYNC1LI2O43237 492 aaPredicted RBP26.76■■□□□ 1.87
C9orf3-216ENST00000478603 CDK7P50613 346 aa26.76■■□□□ 1.87
C9orf3-216ENST00000478603 GPATCH4Q5T3I0 446 aaKnown RBP26.76■■□□□ 1.87
C9orf3-216ENST00000478603 MORC4Q8TE76 937 aa26.76■■□□□ 1.87
C9orf3-216ENST00000478603 ZSCAN10Q96SZ4 725 aaPredicted RBP26.76■■□□□ 1.87
C9orf3-216ENST00000478603 KAT14Q9H8E8 782 aa26.76■■□□□ 1.87
C9orf3-216ENST00000478603 VTA1Q9NP79 307 aa26.76■■□□□ 1.87
C9orf3-216ENST00000478603 ADD3Q9UEY8 706 aaKnown RBP26.76■■□□□ 1.87
C9orf3-216ENST00000478603 CTNNA3Q9UI47 895 aa26.76■■□□□ 1.87
C9orf3-216ENST00000478603 MYH6P13533 1939 aa26.75■■□□□ 1.87
C9orf3-216ENST00000478603 ARVCFO00192 962 aa26.75■■□□□ 1.87
C9orf3-216ENST00000478603 CCDC178Q5BJE1 867 aa26.75■■□□□ 1.87
C9orf3-216ENST00000478603 IQSEC1Q6DN90 963 aa26.75■■□□□ 1.87
C9orf3-216ENST00000478603 CXCL17Q6UXB2 119 aa26.75■■□□□ 1.87
C9orf3-216ENST00000478603 RNF207Q6ZRF8 634 aa26.75■■□□□ 1.87
C9orf3-216ENST00000478603 KIAA1211Q6ZU35 1233 aa26.75■■□□□ 1.87
C9orf3-216ENST00000478603 ENAHQ8N8S7 591 aaPredicted RBP26.75■■□□□ 1.87
C9orf3-216ENST00000478603 AP5M1Q9H0R1 490 aa26.75■■□□□ 1.87
C9orf3-216ENST00000478603 TNKSO95271 1327 aa26.74■■□□□ 1.87
C9orf3-216ENST00000478603 MROH7Q68CQ1 1323 aa26.74■■□□□ 1.87
C9orf3-216ENST00000478603 WDR19Q8NEZ3 1342 aa26.74■■□□□ 1.87
C9orf3-216ENST00000478603 NT5C2P49902 561 aa26.74■■□□□ 1.87
C9orf3-216ENST00000478603 FSCN1Q16658 493 aaKnown RBP26.74■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms