RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 GP6Q9HCN6 339 aa6.48□□□□□ -1.37
CDC42BPA-212ENST00000478573 OTOL1A6NHN0 477 aaPredicted RBP6.47□□□□□ -1.37
CDC42BPA-212ENST00000478573 FOXD2O60548 495 aaPredicted RBP6.47□□□□□ -1.37
CDC42BPA-212ENST00000478573 CD3EP07766 207 aa6.47□□□□□ -1.37
CDC42BPA-212ENST00000478573 FANCCQ00597 558 aa6.47□□□□□ -1.37
CDC42BPA-212ENST00000478573 MVKQ03426 396 aa6.47□□□□□ -1.37
CDC42BPA-212ENST00000478573 BICRALQ6AI39 1079 aa6.47□□□□□ -1.37
CDC42BPA-212ENST00000478573 ZDHHC15Q96MV8 337 aa6.47□□□□□ -1.37
CDC42BPA-212ENST00000478573 PCDHA5Q9Y5H7 936 aa6.47□□□□□ -1.37
CDC42BPA-212ENST00000478573 ITGA4P13612 1032 aa6.46□□□□□ -1.38
CDC42BPA-212ENST00000478573 SYN1P17600 705 aa6.46□□□□□ -1.38
CDC42BPA-212ENST00000478573 CD247P20963 164 aa6.46□□□□□ -1.38
CDC42BPA-212ENST00000478573 GUCY2CP25092 1073 aa6.46□□□□□ -1.38
CDC42BPA-212ENST00000478573 TACR1P25103 407 aa6.46□□□□□ -1.38
CDC42BPA-212ENST00000478573 NOP2P46087 812 aaKnown RBP6.46□□□□□ -1.38
CDC42BPA-212ENST00000478573 LIMS1P48059 325 aa6.46□□□□□ -1.38
CDC42BPA-212ENST00000478573 HDLBPQ00341 1268 aaKnown RBP6.46□□□□□ -1.38
CDC42BPA-212ENST00000478573 PPP2R5DQ14738 602 aa6.46□□□□□ -1.38
CDC42BPA-212ENST00000478573 CYP2R1Q6VVX0 501 aa6.46□□□□□ -1.38
CDC42BPA-212ENST00000478573 UNC5AQ6ZN44 842 aa6.46□□□□□ -1.38
CDC42BPA-212ENST00000478573 CCDC81Q6ZN84 652 aa6.46□□□□□ -1.38
CDC42BPA-212ENST00000478573 METTL16Q86W50 562 aaKnown RBP6.46□□□□□ -1.38
CDC42BPA-212ENST00000478573 TAB3Q8N5C8 712 aaPredicted RBP6.46□□□□□ -1.38
CDC42BPA-212ENST00000478573 SYT8Q8NBV8 401 aa6.46□□□□□ -1.38
CDC42BPA-212ENST00000478573 C8orf37Q96NL8 207 aa6.46□□□□□ -1.38
CDC42BPA-212ENST00000478573 XYLT2Q9H1B5 865 aa6.46□□□□□ -1.38
CDC42BPA-212ENST00000478573 SF3B6Q9Y3B4 125 aaKnown RBP6.46□□□□□ -1.38
CDC42BPA-212ENST00000478573 ZNF451Q9Y4E5 1061 aa6.46□□□□□ -1.38
CDC42BPA-212ENST00000478573 FHOD1Q9Y613 1164 aa6.46□□□□□ -1.38
CDC42BPA-212ENST00000478573 FGF10O15520 208 aaPredicted RBP6.45□□□□□ -1.38
CDC42BPA-212ENST00000478573 IFNGR1P15260 489 aa6.45□□□□□ -1.38
CDC42BPA-212ENST00000478573 MAPKAPK2P49137 400 aa6.45□□□□□ -1.38
CDC42BPA-212ENST00000478573 NR1I3Q14994 352 aa6.45□□□□□ -1.38
CDC42BPA-212ENST00000478573 LSRQ86X29 649 aaPredicted RBP6.45□□□□□ -1.38
CDC42BPA-212ENST00000478573 ADCY4Q8NFM4 1077 aa6.45□□□□□ -1.38
CDC42BPA-212ENST00000478573 RNF34Q969K3 372 aa6.45□□□□□ -1.38
CDC42BPA-212ENST00000478573 KRTAP4-11Q9BYQ6 195 aa6.45□□□□□ -1.38
CDC42BPA-212ENST00000478573 DBR1Q9UK59 544 aaKnown RBP6.45□□□□□ -1.38
CDC42BPA-212ENST00000478573 HCFC2Q9Y5Z7 792 aa6.45□□□□□ -1.38
CDC42BPA-212ENST00000478573 DBHP09172 617 aa6.44□□□□□ -1.38
CDC42BPA-212ENST00000478573 PFKLP17858 780 aa6.44□□□□□ -1.38
CDC42BPA-212ENST00000478573 POU4F1Q01851 419 aa6.44□□□□□ -1.38
CDC42BPA-212ENST00000478573 CBX2Q14781 532 aaPredicted RBP6.44□□□□□ -1.38
CDC42BPA-212ENST00000478573 SP8Q8IXZ3 490 aa6.44□□□□□ -1.38
CDC42BPA-212ENST00000478573 FCRL3Q96P31 734 aaPredicted RBP6.44□□□□□ -1.38
CDC42BPA-212ENST00000478573 RTEL1Q9NZ71 1219 aa6.44□□□□□ -1.38
CDC42BPA-212ENST00000478573 TBC1D8O95759 1140 aa6.43□□□□□ -1.38
CDC42BPA-212ENST00000478573 CYBBP04839 570 aa6.43□□□□□ -1.38
CDC42BPA-212ENST00000478573 RACK1P63244 317 aaKnown RBP6.43□□□□□ -1.38
CDC42BPA-212ENST00000478573 TCEAL1Q15170 157 aa6.43□□□□□ -1.38
CDC42BPA-212ENST00000478573 ANKRD39Q53RE8 183 aa6.43□□□□□ -1.38
CDC42BPA-212ENST00000478573 PAQR3Q6TCH7 311 aa6.43□□□□□ -1.38
CDC42BPA-212ENST00000478573 PTCHD1Q96NR3 888 aa6.43□□□□□ -1.38
CDC42BPA-212ENST00000478573 CRBNQ96SW2 442 aa6.43□□□□□ -1.38
CDC42BPA-212ENST00000478573 PDLIM7Q9NR12 457 aa6.43□□□□□ -1.38
CDC42BPA-212ENST00000478573 F8W031 263 aaPredicted RBP6.42□□□□□ -1.38
CDC42BPA-212ENST00000478573 ERCC5P28715 1186 aaPredicted RBP6.42□□□□□ -1.38
CDC42BPA-212ENST00000478573 ZC3H6P61129 1189 aaKnown RBP6.42□□□□□ -1.38
CDC42BPA-212ENST00000478573 LCE5AQ5TCM9 118 aa6.42□□□□□ -1.38
CDC42BPA-212ENST00000478573 LINC01356Q8N9X3 169 aa6.42□□□□□ -1.38
CDC42BPA-212ENST00000478573 RBBP8NLQ8NC74 664 aaPredicted RBP6.42□□□□□ -1.38
CDC42BPA-212ENST00000478573 SRRTQ9BXP5 876 aaKnown RBP6.42□□□□□ -1.38
CDC42BPA-212ENST00000478573 ADAM7Q9H2U9 754 aa6.42□□□□□ -1.38
CDC42BPA-212ENST00000478573 ZNF214Q9UL59 606 aaPredicted RBP6.42□□□□□ -1.38
CDC42BPA-212ENST00000478573 PLA2G2DQ9UNK4 145 aa6.42□□□□□ -1.38
CDC42BPA-212ENST00000478573 ZC3H12DA2A288 527 aaKnown RBP6.41□□□□□ -1.38
CDC42BPA-212ENST00000478573 STXBP3O00186 592 aa6.41□□□□□ -1.38
CDC42BPA-212ENST00000478573 L1CAMP32004 1257 aa6.41□□□□□ -1.38
CDC42BPA-212ENST00000478573 TARBP2Q15633 366 aaKnown RBP6.41□□□□□ -1.38
CDC42BPA-212ENST00000478573 DPY19L1Q2PZI1 675 aa6.41□□□□□ -1.38
CDC42BPA-212ENST00000478573 GNPTABQ3T906 1256 aa6.41□□□□□ -1.38
CDC42BPA-212ENST00000478573 ADAT2Q7Z6V5 191 aaKnown RBP6.41□□□□□ -1.38
CDC42BPA-212ENST00000478573 NT5DC4Q86YG4 428 aa6.41□□□□□ -1.38
CDC42BPA-212ENST00000478573 NLGN1Q8N2Q7 840 aa6.41□□□□□ -1.38
CDC42BPA-212ENST00000478573 RXFP1Q9HBX9 757 aa6.41□□□□□ -1.38
CDC42BPA-212ENST00000478573 GINM1Q9NU53 330 aa6.41□□□□□ -1.38
CDC42BPA-212ENST00000478573 DDX41Q9UJV9 622 aaKnown RBP6.41□□□□□ -1.38
CDC42BPA-212ENST00000478573 PCDHB10Q9UN67 800 aa6.41□□□□□ -1.38
CDC42BPA-212ENST00000478573 FAN1Q9Y2M0 1017 aa6.41□□□□□ -1.38
CDC42BPA-212ENST00000478573 LTBP3Q9NS15 1303 aa6.41□□□□□ -1.38
CDC42BPA-212ENST00000478573 SRGAP3O43295 1099 aa6.4□□□□□ -1.38
CDC42BPA-212ENST00000478573 CBFA2T2O43439 604 aa6.4□□□□□ -1.38
CDC42BPA-212ENST00000478573 IGFBP6P24592 240 aaPredicted RBP6.4□□□□□ -1.38
CDC42BPA-212ENST00000478573 PRR5P85299 388 aa6.4□□□□□ -1.38
CDC42BPA-212ENST00000478573 PAK2Q13177 524 aa6.4□□□□□ -1.38
CDC42BPA-212ENST00000478573 ERICH6BQ5W0A0 696 aa6.4□□□□□ -1.38
CDC42BPA-212ENST00000478573 HEATR6Q6AI08 1181 aaKnown RBP6.4□□□□□ -1.38
CDC42BPA-212ENST00000478573 HAUS7Q99871 368 aa6.4□□□□□ -1.38
CDC42BPA-212ENST00000478573 TGIF2Q9GZN2 237 aa6.4□□□□□ -1.38
CDC42BPA-212ENST00000478573 GBP3Q9H0R5 595 aa6.4□□□□□ -1.38
CDC42BPA-212ENST00000478573 LUC7LQ9NQ29 371 aaKnown RBP6.4□□□□□ -1.38
CDC42BPA-212ENST00000478573 EFR3BQ9Y2G0 817 aa6.4□□□□□ -1.38
CDC42BPA-212ENST00000478573 VAMP4O75379 141 aa6.39□□□□□ -1.39
CDC42BPA-212ENST00000478573 CORO7P57737 925 aa6.39□□□□□ -1.39
CDC42BPA-212ENST00000478573 C9orf131Q5VYM1 1079 aa6.39□□□□□ -1.39
CDC42BPA-212ENST00000478573 CABP7Q86V35 215 aa6.39□□□□□ -1.39
CDC42BPA-212ENST00000478573 TP53I13Q8NBR0 393 aaPredicted RBP6.39□□□□□ -1.39
CDC42BPA-212ENST00000478573 CXorf38Q8TB03 319 aa6.39□□□□□ -1.39
CDC42BPA-212ENST00000478573 FGD4Q96M96 766 aa6.39□□□□□ -1.39
CDC42BPA-212ENST00000478573 KRTAP9-3Q9BYQ3 159 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms