RNA–Protein interactions for RNA: ENST00000478245.1

TCTN3-205, Transcript of tectonic family member 3, humanhuman

TSL 2

Gene TCTN3, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCTN3-205ENST00000478245 CHST13Q8NET6 341 aa11.32□□□□□ -0.6
TCTN3-205ENST00000478245 MFSD14AQ96MC6 490 aa11.32□□□□□ -0.6
TCTN3-205ENST00000478245 KATNBL1Q9H079 304 aa11.32□□□□□ -0.6
TCTN3-205ENST00000478245 HOMER2Q9NSB8 354 aa11.32□□□□□ -0.6
TCTN3-205ENST00000478245 MTUS1Q9ULD2 1270 aa11.32□□□□□ -0.6
TCTN3-205ENST00000478245 GNEQ9Y223 722 aaKnown RBP11.32□□□□□ -0.6
TCTN3-205ENST00000478245 MYO7AQ13402 2215 aa11.32□□□□□ -0.6
TCTN3-205ENST00000478245 USP34Q70CQ2 3546 aa11.31□□□□□ -0.6
TCTN3-205ENST00000478245 GRXCR2A6NFK2 248 aa11.31□□□□□ -0.6
TCTN3-205ENST00000478245 ASB14A6NK59 587 aa11.31□□□□□ -0.6
TCTN3-205ENST00000478245 ATP2A1O14983 1001 aa11.31□□□□□ -0.6
TCTN3-205ENST00000478245 ST18O60284 1047 aa11.31□□□□□ -0.6
TCTN3-205ENST00000478245 CT47B1P0C2W7 299 aaPredicted RBP11.31□□□□□ -0.6
TCTN3-205ENST00000478245 PDE6AP16499 860 aa11.31□□□□□ -0.6
TCTN3-205ENST00000478245 SMPD1P17405 629 aa11.31□□□□□ -0.6
TCTN3-205ENST00000478245 TTF1Q15361 905 aaPredicted RBP11.31□□□□□ -0.6
TCTN3-205ENST00000478245 PUS10Q3MIT2 529 aaKnown RBP11.31□□□□□ -0.6
TCTN3-205ENST00000478245 FAM47CQ5HY64 1035 aa11.31□□□□□ -0.6
TCTN3-205ENST00000478245 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.31□□□□□ -0.6
TCTN3-205ENST00000478245 LCORLQ8N3X6 602 aa11.31□□□□□ -0.6
TCTN3-205ENST00000478245 ARHGAP45Q92619 1136 aa11.31□□□□□ -0.6
TCTN3-205ENST00000478245 KIFC2Q96AC6 838 aa11.31□□□□□ -0.6
TCTN3-205ENST00000478245 ZNF532Q9HCE3 1301 aa11.31□□□□□ -0.6
TCTN3-205ENST00000478245 C5orf42Q9H799 3197 aa11.3□□□□□ -0.6
TCTN3-205ENST00000478245 CACNA1HO95180 2353 aa11.3□□□□□ -0.6
TCTN3-205ENST00000478245 CYP2D7A0A087X1C5 515 aa11.3□□□□□ -0.6
TCTN3-205ENST00000478245 POTEB3A0JP26 581 aa11.3□□□□□ -0.6
TCTN3-205ENST00000478245 LCHNA4D1U4 455 aa11.3□□□□□ -0.6
TCTN3-205ENST00000478245 BCAR3O75815 825 aa11.3□□□□□ -0.6
TCTN3-205ENST00000478245 BAIAP3O94812 1187 aa11.3□□□□□ -0.6
TCTN3-205ENST00000478245 PTGS1P23219 599 aa11.3□□□□□ -0.6
TCTN3-205ENST00000478245 POLA2Q14181 598 aa11.3□□□□□ -0.6
TCTN3-205ENST00000478245 IQSEC1Q6DN90 963 aa11.3□□□□□ -0.6
TCTN3-205ENST00000478245 POTEBQ6S5H4 581 aa11.3□□□□□ -0.6
TCTN3-205ENST00000478245 HFE2Q6ZVN8 426 aa11.3□□□□□ -0.6
TCTN3-205ENST00000478245 EEPD1Q7L9B9 569 aa11.3□□□□□ -0.6
TCTN3-205ENST00000478245 EAF2Q96CJ1 260 aaPredicted RBP11.3□□□□□ -0.6
TCTN3-205ENST00000478245 DDRGK1Q96HY6 314 aa11.3□□□□□ -0.6
TCTN3-205ENST00000478245 TGS1Q96RS0 853 aaKnown RBP11.3□□□□□ -0.6
TCTN3-205ENST00000478245 CRBNQ96SW2 442 aa11.3□□□□□ -0.6
TCTN3-205ENST00000478245 PHOX2BQ99453 314 aa11.3□□□□□ -0.6
TCTN3-205ENST00000478245 ARMT1Q9H993 441 aa11.3□□□□□ -0.6
TCTN3-205ENST00000478245 SUGCTQ9HAC7 445 aa11.3□□□□□ -0.6
TCTN3-205ENST00000478245 GPHNQ9NQX3 736 aaPredicted RBP11.3□□□□□ -0.6
TCTN3-205ENST00000478245 POLR3EQ9NVU0 708 aa11.3□□□□□ -0.6
TCTN3-205ENST00000478245 FAM50BQ9Y247 325 aa11.3□□□□□ -0.6
TCTN3-205ENST00000478245 COG6Q9Y2V7 657 aa11.3□□□□□ -0.6
TCTN3-205ENST00000478245 Q9Y3F1 56 aa11.3□□□□□ -0.6
TCTN3-205ENST00000478245 RIF1Q5UIP0 2472 aaKnown RBP11.3□□□□□ -0.6
TCTN3-205ENST00000478245 SCN10AQ9Y5Y9 1956 aa11.29□□□□□ -0.6
TCTN3-205ENST00000478245 TECTAO75443 2155 aa11.29□□□□□ -0.6
TCTN3-205ENST00000478245 USP17L12C9JPN9 530 aa11.29□□□□□ -0.6
TCTN3-205ENST00000478245 USP17L21D6R901 530 aa11.29□□□□□ -0.6
TCTN3-205ENST00000478245 F5H6K3 240 aa11.29□□□□□ -0.6
TCTN3-205ENST00000478245 PITPNM1O00562 1244 aa11.29□□□□□ -0.6
TCTN3-205ENST00000478245 PRKAB2O43741 272 aa11.29□□□□□ -0.6
TCTN3-205ENST00000478245 MYL3P08590 195 aa11.29□□□□□ -0.6
TCTN3-205ENST00000478245 IQCF3P0C7M6 154 aa11.29□□□□□ -0.6
TCTN3-205ENST00000478245 KLRC3Q07444 240 aa11.29□□□□□ -0.6
TCTN3-205ENST00000478245 BFSP2Q13515 415 aa11.29□□□□□ -0.6
TCTN3-205ENST00000478245 C12orf60Q5U649 245 aa11.29□□□□□ -0.6
TCTN3-205ENST00000478245 EP400NLQ6ZTU2 488 aa11.29□□□□□ -0.6
TCTN3-205ENST00000478245 C16orf86Q6ZW13 317 aa11.29□□□□□ -0.6
TCTN3-205ENST00000478245 FAM133AQ8N9E0 248 aa11.29□□□□□ -0.6
TCTN3-205ENST00000478245 SSH3Q8TE77 659 aa11.29□□□□□ -0.6
TCTN3-205ENST00000478245 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.29□□□□□ -0.6
TCTN3-205ENST00000478245 UPF3BQ9BZI7 483 aaKnown RBP11.29□□□□□ -0.6
TCTN3-205ENST00000478245 ACAD9Q9H845 621 aa11.29□□□□□ -0.6
TCTN3-205ENST00000478245 SLC38A10Q9HBR0 1119 aa11.29□□□□□ -0.6
TCTN3-205ENST00000478245 PDGFCQ9NRA1 345 aa11.29□□□□□ -0.6
TCTN3-205ENST00000478245 ATP8A2Q9NTI2 1148 aa11.29□□□□□ -0.6
TCTN3-205ENST00000478245 NOD1Q9Y239 953 aa11.29□□□□□ -0.6
TCTN3-205ENST00000478245 SOWAHBA6NEL2 793 aa11.28□□□□□ -0.6
TCTN3-205ENST00000478245 H3BQ06 376 aaPredicted RBP11.28□□□□□ -0.6
TCTN3-205ENST00000478245 IPO8O15397 1037 aaKnown RBP11.28□□□□□ -0.6
TCTN3-205ENST00000478245 NDUFB10O96000 172 aa11.28□□□□□ -0.6
TCTN3-205ENST00000478245 OAZ1P54368 228 aa11.28□□□□□ -0.6
TCTN3-205ENST00000478245 ATP8B2P98198 1209 aa11.28□□□□□ -0.6
TCTN3-205ENST00000478245 FOXK2Q01167 660 aa11.28□□□□□ -0.6
TCTN3-205ENST00000478245 KIAA1211Q6ZU35 1233 aa11.28□□□□□ -0.6
TCTN3-205ENST00000478245 TMCO2Q7Z6W1 182 aaPredicted RBP11.28□□□□□ -0.6
TCTN3-205ENST00000478245 FBXO16Q8IX29 292 aaPredicted RBP11.28□□□□□ -0.6
TCTN3-205ENST00000478245 ANKS1AQ92625 1134 aa11.28□□□□□ -0.6
TCTN3-205ENST00000478245 ISY1Q9ULR0 285 aaKnown RBP11.28□□□□□ -0.6
TCTN3-205ENST00000478245 GREB1LQ9C091 1923 aaPredicted RBP11.28□□□□□ -0.6
TCTN3-205ENST00000478245 MYH7P12883 1935 aa11.27□□□□□ -0.6
TCTN3-205ENST00000478245 MBD4O95243 580 aa11.27□□□□□ -0.61
TCTN3-205ENST00000478245 CPT1AP50416 773 aa11.27□□□□□ -0.61
TCTN3-205ENST00000478245 PTPN5P54829 565 aa11.27□□□□□ -0.61
TCTN3-205ENST00000478245 ERVK-21P61565 698 aa11.27□□□□□ -0.61
TCTN3-205ENST00000478245 WDR5P61964 334 aaKnown RBP11.27□□□□□ -0.61
TCTN3-205ENST00000478245 PURAQ00577 322 aaKnown RBP11.27□□□□□ -0.61
TCTN3-205ENST00000478245 NBPF20Q3BBV1 942 aa11.27□□□□□ -0.61
TCTN3-205ENST00000478245 TMEM63BQ5T3F8 832 aa11.27□□□□□ -0.61
TCTN3-205ENST00000478245 TAPT1Q6NXT6 567 aa11.27□□□□□ -0.61
TCTN3-205ENST00000478245 AACSQ86V21 672 aa11.27□□□□□ -0.61
TCTN3-205ENST00000478245 RAD9AQ99638 391 aa11.27□□□□□ -0.61
TCTN3-205ENST00000478245 MTG1Q9BT17 334 aaPredicted RBP11.27□□□□□ -0.61
TCTN3-205ENST00000478245 A1CFQ9NQ94 594 aaKnown RBP11.27□□□□□ -0.61
TCTN3-205ENST00000478245 PRKAG3Q9UGI9 489 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms