RNA–Protein interactions for RNA: ENST00000478219.1

COL13A1-207, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 2

Gene COL13A1, Length 2,586 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-207ENST00000478219 PLAAQ9Y263 795 aa10.93□□□□□ -0.66
COL13A1-207ENST00000478219 WDR19Q8NEZ3 1342 aa10.93□□□□□ -0.66
COL13A1-207ENST00000478219 ANKRD33BA6NCL7 494 aa10.93□□□□□ -0.66
COL13A1-207ENST00000478219 EIF4E1BA6NMX2 242 aaKnown RBP10.93□□□□□ -0.66
COL13A1-207ENST00000478219 TRAPPC3O43617 180 aa10.93□□□□□ -0.66
COL13A1-207ENST00000478219 HEXIM1O94992 359 aaKnown RBP10.93□□□□□ -0.66
COL13A1-207ENST00000478219 VAV2P52735 878 aa10.93□□□□□ -0.66
COL13A1-207ENST00000478219 SAFBQ15424 915 aaKnown RBP eCLIP10.93□□□□□ -0.66
COL13A1-207ENST00000478219 ZKSCAN8Q15776 578 aaPredicted RBP10.93□□□□□ -0.66
COL13A1-207ENST00000478219 HIBCHQ6NVY1 386 aaPredicted RBP10.93□□□□□ -0.66
COL13A1-207ENST00000478219 MAATS1Q7Z4T9 603 aa10.93□□□□□ -0.66
COL13A1-207ENST00000478219 PROCA1Q8NCQ7 364 aaPredicted RBP10.93□□□□□ -0.66
COL13A1-207ENST00000478219 FOXP1Q9H334 677 aaPredicted RBP10.93□□□□□ -0.66
COL13A1-207ENST00000478219 LMO7Q8WWI1 1683 aa10.93□□□□□ -0.66
COL13A1-207ENST00000478219 AFDNP55196 1824 aaKnown RBP10.92□□□□□ -0.66
COL13A1-207ENST00000478219 TNFRSF8P28908 595 aa10.92□□□□□ -0.66
COL13A1-207ENST00000478219 CYLC1P35663 651 aaPredicted RBP10.92□□□□□ -0.66
COL13A1-207ENST00000478219 CEBPAP49715 358 aaPredicted RBP10.92□□□□□ -0.66
COL13A1-207ENST00000478219 RNASE9P60153 205 aaKnown RBP10.92□□□□□ -0.66
COL13A1-207ENST00000478219 ITIH3Q06033 890 aa10.92□□□□□ -0.66
COL13A1-207ENST00000478219 GRIPAP1Q4V328 841 aa10.92□□□□□ -0.66
COL13A1-207ENST00000478219 CCDC181Q5TID7 509 aa10.92□□□□□ -0.66
COL13A1-207ENST00000478219 CCT6BQ92526 530 aa10.92□□□□□ -0.66
COL13A1-207ENST00000478219 APPBP2Q92624 585 aa10.92□□□□□ -0.66
COL13A1-207ENST00000478219 HVCN1Q96D96 273 aa10.92□□□□□ -0.66
COL13A1-207ENST00000478219 TLR10Q9BXR5 811 aa10.92□□□□□ -0.66
COL13A1-207ENST00000478219 ZSWIM5Q9P217 1185 aa10.92□□□□□ -0.66
COL13A1-207ENST00000478219 C5P01031 1676 aa10.92□□□□□ -0.66
COL13A1-207ENST00000478219 IFNAR1P17181 557 aa10.92□□□□□ -0.66
COL13A1-207ENST00000478219 TRIM21P19474 475 aaKnown RBP10.92□□□□□ -0.66
COL13A1-207ENST00000478219 SLC8A3P57103 927 aa10.92□□□□□ -0.66
COL13A1-207ENST00000478219 SPAG1Q07617 926 aa10.92□□□□□ -0.66
COL13A1-207ENST00000478219 ADCY2Q08462 1091 aa10.92□□□□□ -0.66
COL13A1-207ENST00000478219 SEMA3FQ13275 785 aa10.92□□□□□ -0.66
COL13A1-207ENST00000478219 ZNF174Q15697 407 aa10.92□□□□□ -0.66
COL13A1-207ENST00000478219 HLFQ16534 295 aa10.92□□□□□ -0.66
COL13A1-207ENST00000478219 TSR1Q2NL82 804 aaKnown RBP10.92□□□□□ -0.66
COL13A1-207ENST00000478219 THEMIS2Q5TEJ8 643 aa10.92□□□□□ -0.66
COL13A1-207ENST00000478219 PPP4R3AQ6IN85 833 aa10.92□□□□□ -0.66
COL13A1-207ENST00000478219 RCSD1Q6JBY9 416 aa10.92□□□□□ -0.66
COL13A1-207ENST00000478219 CD302Q8IX05 232 aa10.92□□□□□ -0.66
COL13A1-207ENST00000478219 SPDYE1Q8NFV5 336 aaPredicted RBP10.92□□□□□ -0.66
COL13A1-207ENST00000478219 RAPGEF5Q92565 580 aa10.92□□□□□ -0.66
COL13A1-207ENST00000478219 CUL5Q93034 780 aa10.92□□□□□ -0.66
COL13A1-207ENST00000478219 ZNF570Q96NI8 536 aa10.92□□□□□ -0.66
COL13A1-207ENST00000478219 SH2D4AQ9H788 454 aa10.92□□□□□ -0.66
COL13A1-207ENST00000478219 TMBIM4Q9HC24 238 aa10.92□□□□□ -0.66
COL13A1-207ENST00000478219 SLC12A7Q9Y666 1083 aa10.92□□□□□ -0.66
COL13A1-207ENST00000478219 EID1Q9Y6B2 187 aa10.92□□□□□ -0.66
COL13A1-207ENST00000478219 F8W031 263 aaPredicted RBP10.91□□□□□ -0.66
COL13A1-207ENST00000478219 BUB1BO60566 1050 aaPredicted RBP10.91□□□□□ -0.66
COL13A1-207ENST00000478219 PRDM1O75626 825 aa10.91□□□□□ -0.66
COL13A1-207ENST00000478219 ANP32DO95626 131 aa10.91□□□□□ -0.66
COL13A1-207ENST00000478219 SLC8A1P32418 973 aa10.91□□□□□ -0.66
COL13A1-207ENST00000478219 TCIRG1Q13488 830 aa10.91□□□□□ -0.66
COL13A1-207ENST00000478219 PPP1R7Q15435 360 aa10.91□□□□□ -0.66
COL13A1-207ENST00000478219 GLE1Q53GS7 698 aaKnown RBP10.91□□□□□ -0.66
COL13A1-207ENST00000478219 C1orf141Q5JVX7 400 aa10.91□□□□□ -0.66
COL13A1-207ENST00000478219 TYW1BQ6NUM6 668 aa10.91□□□□□ -0.66
COL13A1-207ENST00000478219 CCDC50Q8IVM0 306 aa10.91□□□□□ -0.66
COL13A1-207ENST00000478219 TRIM58Q8NG06 486 aa10.91□□□□□ -0.66
COL13A1-207ENST00000478219 TCP11Q8WWU5 503 aa10.91□□□□□ -0.66
COL13A1-207ENST00000478219 EBF2Q9HAK2 575 aa10.91□□□□□ -0.66
COL13A1-207ENST00000478219 HMGB1P1B2RPK0 211 aaPredicted RBP10.91□□□□□ -0.66
COL13A1-207ENST00000478219 BUB1O43683 1085 aa10.91□□□□□ -0.66
COL13A1-207ENST00000478219 UAP1Q16222 522 aaPredicted RBP10.91□□□□□ -0.66
COL13A1-207ENST00000478219 CDC37Q16543 378 aaPredicted RBP10.91□□□□□ -0.66
COL13A1-207ENST00000478219 LACTB2Q53H82 288 aaPredicted RBP10.91□□□□□ -0.66
COL13A1-207ENST00000478219 PDXDC2PQ6P474 469 aa10.91□□□□□ -0.66
COL13A1-207ENST00000478219 TMC4Q7Z404 712 aa10.91□□□□□ -0.66
COL13A1-207ENST00000478219 SGMS1Q86VZ5 419 aa10.91□□□□□ -0.66
COL13A1-207ENST00000478219 IFT20Q8IY31 132 aa10.91□□□□□ -0.66
COL13A1-207ENST00000478219 CCDC26Q8TAB7 109 aa10.91□□□□□ -0.66
COL13A1-207ENST00000478219 RSRC1Q96IZ7 334 aaKnown RBP10.91□□□□□ -0.66
COL13A1-207ENST00000478219 SPATS2LQ9NUQ6 558 aaKnown RBP10.91□□□□□ -0.66
COL13A1-207ENST00000478219 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.91□□□□□ -0.66
COL13A1-207ENST00000478219 TRPC6Q9Y210 931 aa10.91□□□□□ -0.66
COL13A1-207ENST00000478219 HYOU1Q9Y4L1 999 aa10.91□□□□□ -0.66
COL13A1-207ENST00000478219 A0A1W2PQC6 194 aa10.9□□□□□ -0.66
COL13A1-207ENST00000478219 TRIM75PA6NK02 468 aa10.9□□□□□ -0.66
COL13A1-207ENST00000478219 NUTM2BA6NNL0 878 aaPredicted RBP10.9□□□□□ -0.66
COL13A1-207ENST00000478219 NUTM2EB1AL46 878 aaPredicted RBP10.9□□□□□ -0.66
COL13A1-207ENST00000478219 H0YGN5 161 aa10.9□□□□□ -0.66
COL13A1-207ENST00000478219 IFIT3O14879 490 aaKnown RBP10.9□□□□□ -0.66
COL13A1-207ENST00000478219 EPHB6O15197 1021 aa10.9□□□□□ -0.66
COL13A1-207ENST00000478219 PPIP5K2O43314 1243 aa10.9□□□□□ -0.66
COL13A1-207ENST00000478219 MYBL1P10243 752 aa10.9□□□□□ -0.66
COL13A1-207ENST00000478219 CALRP27797 417 aaKnown RBP10.9□□□□□ -0.66
COL13A1-207ENST00000478219 IL17AQ16552 155 aa10.9□□□□□ -0.66
COL13A1-207ENST00000478219 IP6K1Q92551 441 aa10.9□□□□□ -0.66
COL13A1-207ENST00000478219 RUBCNQ92622 972 aa10.9□□□□□ -0.66
COL13A1-207ENST00000478219 HOOK2Q96ED9 719 aa10.9□□□□□ -0.66
COL13A1-207ENST00000478219 MTMR8Q96EF0 704 aa10.9□□□□□ -0.66
COL13A1-207ENST00000478219 BORCS6Q96GS4 357 aa10.9□□□□□ -0.66
COL13A1-207ENST00000478219 KRT12Q99456 494 aa10.9□□□□□ -0.66
COL13A1-207ENST00000478219 IFIH1Q9BYX4 1025 aaKnown RBP10.9□□□□□ -0.66
COL13A1-207ENST00000478219 PANK4Q9NVE7 773 aa10.9□□□□□ -0.66
COL13A1-207ENST00000478219 RBM28Q9NW13 759 aaKnown RBP10.9□□□□□ -0.66
COL13A1-207ENST00000478219 ETAA1Q9NY74 926 aa10.9□□□□□ -0.66
COL13A1-207ENST00000478219 ARHGAP20Q9P2F6 1191 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms