RNA–Protein interactions for RNA: ENST00000477991.1

SCUBE1-206, Transcript of signal peptide, CUB domain and EGF like domain containing 1, humanhuman

TSL 3

Gene SCUBE1, Length 489 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE1-206ENST00000477991 CDX2Q99626 313 aaPredicted RBP12.29□□□□□ -0.44
SCUBE1-206ENST00000477991 RANBP17Q9H2T7 1088 aaKnown RBP12.29□□□□□ -0.44
SCUBE1-206ENST00000477991 SPC25Q9HBM1 224 aa12.29□□□□□ -0.44
SCUBE1-206ENST00000477991 CYP39A1Q9NYL5 469 aa12.29□□□□□ -0.44
SCUBE1-206ENST00000477991 A0A0D9SFI3 127 aa12.28□□□□□ -0.44
SCUBE1-206ENST00000477991 A0A0U1RQG5 324 aaPredicted RBP12.28□□□□□ -0.44
SCUBE1-206ENST00000477991 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.28□□□□□ -0.44
SCUBE1-206ENST00000477991 CD4P01730 458 aa12.28□□□□□ -0.44
SCUBE1-206ENST00000477991 ICAM1P05362 532 aa12.28□□□□□ -0.44
SCUBE1-206ENST00000477991 HSPD1P10809 573 aaKnown RBP12.28□□□□□ -0.44
SCUBE1-206ENST00000477991 ALAS1P13196 640 aa12.28□□□□□ -0.44
SCUBE1-206ENST00000477991 AAMPQ13685 434 aa12.28□□□□□ -0.44
SCUBE1-206ENST00000477991 GNASQ5JWF2 1037 aa12.28□□□□□ -0.44
SCUBE1-206ENST00000477991 RASIP1Q5U651 963 aa12.28□□□□□ -0.44
SCUBE1-206ENST00000477991 MFSD5Q6N075 450 aa12.28□□□□□ -0.44
SCUBE1-206ENST00000477991 TAPT1Q6NXT6 567 aa12.28□□□□□ -0.44
SCUBE1-206ENST00000477991 RNPC3Q96LT9 517 aaKnown RBP12.28□□□□□ -0.44
SCUBE1-206ENST00000477991 FAM227BQ96M60 508 aa12.28□□□□□ -0.44
SCUBE1-206ENST00000477991 YTHDC1Q96MU7 727 aaKnown RBP12.28□□□□□ -0.44
SCUBE1-206ENST00000477991 FAM161BQ96MY7 647 aa12.28□□□□□ -0.44
SCUBE1-206ENST00000477991 ISY1Q9ULR0 285 aaKnown RBP12.28□□□□□ -0.44
SCUBE1-206ENST00000477991 Q9Y3F1 56 aa12.28□□□□□ -0.44
SCUBE1-206ENST00000477991 CHD7Q9P2D1 2997 aa12.28□□□□□ -0.44
SCUBE1-206ENST00000477991 LOC102724159A0A0B4J2E5 919 aa12.27□□□□□ -0.45
SCUBE1-206ENST00000477991 TOP1P11387 765 aaKnown RBP12.27□□□□□ -0.45
SCUBE1-206ENST00000477991 PCP11498 1178 aaKnown RBP12.27□□□□□ -0.45
SCUBE1-206ENST00000477991 SNAP25P60880 206 aa12.27□□□□□ -0.45
SCUBE1-206ENST00000477991 TNFAIP2Q03169 654 aa12.27□□□□□ -0.45
SCUBE1-206ENST00000477991 IKQ13123 557 aaPredicted RBP12.27□□□□□ -0.45
SCUBE1-206ENST00000477991 PWP2Q15269 919 aaKnown RBP12.27□□□□□ -0.45
SCUBE1-206ENST00000477991 IQSEC1Q6DN90 963 aa12.27□□□□□ -0.45
SCUBE1-206ENST00000477991 CCDC174Q6PII3 467 aa12.27□□□□□ -0.45
SCUBE1-206ENST00000477991 C16orf59Q7L2K0 433 aa12.27□□□□□ -0.45
SCUBE1-206ENST00000477991 ZNF589Q86UQ0 364 aaPredicted RBP12.27□□□□□ -0.45
SCUBE1-206ENST00000477991 SMC5Q8IY18 1101 aa12.27□□□□□ -0.45
SCUBE1-206ENST00000477991 TMEM47Q9BQJ4 181 aa12.27□□□□□ -0.45
SCUBE1-206ENST00000477991 SEZ6LQ9BYH1 1024 aa12.27□□□□□ -0.45
SCUBE1-206ENST00000477991 SPTBN5Q9NRC6 3674 aaKnown RBP12.26□□□□□ -0.45
SCUBE1-206ENST00000477991 LAMA4Q16363 1823 aa12.26□□□□□ -0.45
SCUBE1-206ENST00000477991 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.26□□□□□ -0.45
SCUBE1-206ENST00000477991 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.26□□□□□ -0.45
SCUBE1-206ENST00000477991 CABYRO75952 493 aa12.26□□□□□ -0.45
SCUBE1-206ENST00000477991 SNHG28P0DPA3 235 aa12.26□□□□□ -0.45
SCUBE1-206ENST00000477991 SMPD1P17405 629 aa12.26□□□□□ -0.45
SCUBE1-206ENST00000477991 TTBK2Q6IQ55 1244 aa12.26□□□□□ -0.45
SCUBE1-206ENST00000477991 TLK2Q86UE8 772 aa12.26□□□□□ -0.45
SCUBE1-206ENST00000477991 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.26□□□□□ -0.45
SCUBE1-206ENST00000477991 CHMP4CQ96CF2 233 aa12.26□□□□□ -0.45
SCUBE1-206ENST00000477991 TTC14Q96N46 770 aa12.26□□□□□ -0.45
SCUBE1-206ENST00000477991 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.26□□□□□ -0.45
SCUBE1-206ENST00000477991 OSBPL3Q9H4L5 887 aa12.26□□□□□ -0.45
SCUBE1-206ENST00000477991 PDGFCQ9NRA1 345 aa12.26□□□□□ -0.45
SCUBE1-206ENST00000477991 CCPG1Q9ULG6 757 aa12.26□□□□□ -0.45
SCUBE1-206ENST00000477991 GRIN2DO15399 1336 aa12.26□□□□□ -0.45
SCUBE1-206ENST00000477991 RBM47A0AV96 593 aaKnown RBP12.25□□□□□ -0.45
SCUBE1-206ENST00000477991 PDHBP11177 359 aa12.25□□□□□ -0.45
SCUBE1-206ENST00000477991 SLC16A2P36021 539 aa12.25□□□□□ -0.45
SCUBE1-206ENST00000477991 BEX3Q00994 111 aa12.25□□□□□ -0.45
SCUBE1-206ENST00000477991 NMIQ13287 307 aaPredicted RBP12.25□□□□□ -0.45
SCUBE1-206ENST00000477991 PPIGQ13427 754 aaKnown RBP eCLIP12.25□□□□□ -0.45
SCUBE1-206ENST00000477991 FSCN1Q16658 493 aaKnown RBP12.25□□□□□ -0.45
SCUBE1-206ENST00000477991 TMEM240Q5SV17 173 aa12.25□□□□□ -0.45
SCUBE1-206ENST00000477991 AKNAD1Q5T1N1 836 aa12.25□□□□□ -0.45
SCUBE1-206ENST00000477991 SYDE2Q5VT97 1194 aa12.25□□□□□ -0.45
SCUBE1-206ENST00000477991 PURBQ96QR8 312 aaKnown RBP12.25□□□□□ -0.45
SCUBE1-206ENST00000477991 VTA1Q9NP79 307 aa12.25□□□□□ -0.45
SCUBE1-206ENST00000477991 DDX49Q9Y6V7 483 aaKnown RBP12.25□□□□□ -0.45
SCUBE1-206ENST00000477991 CCDC171Q6TFL3 1326 aa12.25□□□□□ -0.45
SCUBE1-206ENST00000477991 NFIBO00712 420 aa12.24□□□□□ -0.45
SCUBE1-206ENST00000477991 TLR3O15455 904 aaKnown RBP12.24□□□□□ -0.45
SCUBE1-206ENST00000477991 DYNC1LI2O43237 492 aaPredicted RBP12.24□□□□□ -0.45
SCUBE1-206ENST00000477991 REV3LO60673 3130 aa12.24□□□□□ -0.45
SCUBE1-206ENST00000477991 PTGS1P23219 599 aa12.24□□□□□ -0.45
SCUBE1-206ENST00000477991 NT5C2P49902 561 aa12.24□□□□□ -0.45
SCUBE1-206ENST00000477991 ZNF543Q08ER8 600 aa12.24□□□□□ -0.45
SCUBE1-206ENST00000477991 BAATQ14032 418 aaPredicted RBP12.24□□□□□ -0.45
SCUBE1-206ENST00000477991 CCDC96Q2M329 555 aa12.24□□□□□ -0.45
SCUBE1-206ENST00000477991 DUSP28Q4G0W2 176 aa12.24□□□□□ -0.45
SCUBE1-206ENST00000477991 TMEM63BQ5T3F8 832 aa12.24□□□□□ -0.45
SCUBE1-206ENST00000477991 CXCL17Q6UXB2 119 aa12.24□□□□□ -0.45
SCUBE1-206ENST00000477991 NSMFQ6X4W1 530 aa12.24□□□□□ -0.45
SCUBE1-206ENST00000477991 FBXO16Q8IX29 292 aaPredicted RBP12.24□□□□□ -0.45
SCUBE1-206ENST00000477991 TMEM199Q8N511 208 aa12.24□□□□□ -0.45
SCUBE1-206ENST00000477991 CLEC4DQ8WXI8 215 aa12.24□□□□□ -0.45
SCUBE1-206ENST00000477991 MYLIPQ8WY64 445 aa12.24□□□□□ -0.45
SCUBE1-206ENST00000477991 VTI1AQ96AJ9 217 aa12.24□□□□□ -0.45
SCUBE1-206ENST00000477991 COL25A1Q9BXS0 654 aaPredicted RBP12.24□□□□□ -0.45
SCUBE1-206ENST00000477991 LNPKQ9C0E8 428 aa12.24□□□□□ -0.45
SCUBE1-206ENST00000477991 PNMA2Q9UL42 364 aa12.24□□□□□ -0.45
SCUBE1-206ENST00000477991 SCN10AQ9Y5Y9 1956 aa12.23□□□□□ -0.45
SCUBE1-206ENST00000477991 WDR19Q8NEZ3 1342 aa12.23□□□□□ -0.45
SCUBE1-206ENST00000477991 ZEB2O60315 1214 aa12.23□□□□□ -0.45
SCUBE1-206ENST00000477991 CSF2RAP15509 400 aa12.23□□□□□ -0.45
SCUBE1-206ENST00000477991 DNAJB2P25686 324 aa12.23□□□□□ -0.45
SCUBE1-206ENST00000477991 ALDH5A1P51649 535 aaPredicted RBP12.23□□□□□ -0.45
SCUBE1-206ENST00000477991 ITGA7Q13683 1181 aa12.23□□□□□ -0.45
SCUBE1-206ENST00000477991 RRP12Q5JTH9 1297 aaKnown RBP12.23□□□□□ -0.45
SCUBE1-206ENST00000477991 B4GALNT3Q6L9W6 998 aa12.23□□□□□ -0.45
SCUBE1-206ENST00000477991 MFSD6Q6ZSS7 791 aa12.23□□□□□ -0.45
SCUBE1-206ENST00000477991 EEPD1Q7L9B9 569 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms