RNA–Protein interactions for RNA: ENST00000477988.1

NCKAP1-204, Transcript of NCK associated protein 1, humanhuman

TSL 2

Gene NCKAP1, Length 612 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-204ENST00000477988 A0A1W2PQC6 194 aa6.4□□□□□ -1.38
NCKAP1-204ENST00000477988 A0A1W2PQD8 194 aa6.4□□□□□ -1.38
NCKAP1-204ENST00000477988 SUPT5HO00267 1087 aaKnown RBP6.4□□□□□ -1.38
NCKAP1-204ENST00000477988 GREM1O60565 184 aa6.4□□□□□ -1.38
NCKAP1-204ENST00000477988 GSNP06396 782 aa6.4□□□□□ -1.38
NCKAP1-204ENST00000477988 GJA9P57773 515 aa6.4□□□□□ -1.38
NCKAP1-204ENST00000477988 MVKQ03426 396 aa6.4□□□□□ -1.38
NCKAP1-204ENST00000477988 FBXL19Q6PCT2 694 aa6.4□□□□□ -1.38
NCKAP1-204ENST00000477988 ERICH6Q7L0X2 663 aa6.4□□□□□ -1.38
NCKAP1-204ENST00000477988 ZFPM1Q8IX07 1006 aa6.4□□□□□ -1.38
NCKAP1-204ENST00000477988 LOXL4Q96JB6 756 aa6.4□□□□□ -1.38
NCKAP1-204ENST00000477988 ZNF512BQ96KM6 892 aaPredicted RBP6.4□□□□□ -1.38
NCKAP1-204ENST00000477988 MKRN2Q9H000 416 aaKnown RBP6.4□□□□□ -1.38
NCKAP1-204ENST00000477988 RNF38Q9H0F5 515 aa6.4□□□□□ -1.38
NCKAP1-204ENST00000477988 GFOD1Q9NXC2 390 aa6.4□□□□□ -1.38
NCKAP1-204ENST00000477988 FBXL21Q9UKT6 434 aa6.4□□□□□ -1.38
NCKAP1-204ENST00000477988 PLA2G2DQ9UNK4 145 aa6.4□□□□□ -1.38
NCKAP1-204ENST00000477988 SUPT16HQ9Y5B9 1047 aaKnown RBP6.4□□□□□ -1.38
NCKAP1-204ENST00000477988 MEIS1O00470 390 aa6.39□□□□□ -1.39
NCKAP1-204ENST00000477988 AUHQ13825 339 aaKnown RBP6.39□□□□□ -1.39
NCKAP1-204ENST00000477988 LRRFIP1Q32MZ4 808 aaKnown RBP6.39□□□□□ -1.39
NCKAP1-204ENST00000477988 TNFRSF10CO14798 259 aa6.38□□□□□ -1.39
NCKAP1-204ENST00000477988 DBHP09172 617 aa6.38□□□□□ -1.39
NCKAP1-204ENST00000477988 RTP2Q5QGT7 225 aa6.38□□□□□ -1.39
NCKAP1-204ENST00000477988 ERMP1Q7Z2K6 904 aa6.38□□□□□ -1.39
NCKAP1-204ENST00000477988 TMEM192Q8IY95 271 aa6.38□□□□□ -1.39
NCKAP1-204ENST00000477988 REXO1Q8N1G1 1221 aaKnown RBP6.38□□□□□ -1.39
NCKAP1-204ENST00000477988 DVL3Q92997 716 aaPredicted RBP6.38□□□□□ -1.39
NCKAP1-204ENST00000477988 FAM161BQ96MY7 647 aa6.38□□□□□ -1.39
NCKAP1-204ENST00000477988 KBTBD4Q9NVX7 518 aa6.38□□□□□ -1.39
NCKAP1-204ENST00000477988 HCFC2Q9Y5Z7 792 aa6.38□□□□□ -1.39
NCKAP1-204ENST00000477988 PLATP00750 562 aa6.37□□□□□ -1.39
NCKAP1-204ENST00000477988 NME1P15531 152 aaKnown RBP6.37□□□□□ -1.39
NCKAP1-204ENST00000477988 EIF4A3P38919 411 aaKnown RBP6.37□□□□□ -1.39
NCKAP1-204ENST00000477988 CORO7P57737 925 aa6.37□□□□□ -1.39
NCKAP1-204ENST00000477988 TBC1D10BQ4KMP7 808 aaPredicted RBP6.37□□□□□ -1.39
NCKAP1-204ENST00000477988 CRTC3Q6UUV7 619 aa6.37□□□□□ -1.39
NCKAP1-204ENST00000477988 CYP2R1Q6VVX0 501 aa6.37□□□□□ -1.39
NCKAP1-204ENST00000477988 SPRED1Q7Z699 444 aa6.37□□□□□ -1.39
NCKAP1-204ENST00000477988 JAMLQ86YT9 394 aa6.37□□□□□ -1.39
NCKAP1-204ENST00000477988 NAT16Q8N8M0 369 aa6.37□□□□□ -1.39
NCKAP1-204ENST00000477988 SSBP3Q9BWW4 388 aaPredicted RBP6.37□□□□□ -1.39
NCKAP1-204ENST00000477988 SRRTQ9BXP5 876 aaKnown RBP6.37□□□□□ -1.39
NCKAP1-204ENST00000477988 ANTXR1Q9H6X2 564 aa6.37□□□□□ -1.39
NCKAP1-204ENST00000477988 MRS2Q9HD23 443 aa6.37□□□□□ -1.39
NCKAP1-204ENST00000477988 PDLIM7Q9NR12 457 aa6.37□□□□□ -1.39
NCKAP1-204ENST00000477988 FAN1Q9Y2M0 1017 aa6.37□□□□□ -1.39
NCKAP1-204ENST00000477988 A0A1W2PQJ5 194 aa6.36□□□□□ -1.39
NCKAP1-204ENST00000477988 MEIS3P2A8K0S8 358 aa6.36□□□□□ -1.39
NCKAP1-204ENST00000477988 NCAM1P13591 858 aa6.36□□□□□ -1.39
NCKAP1-204ENST00000477988 ZNF761Q86XN6 746 aaPredicted RBP6.36□□□□□ -1.39
NCKAP1-204ENST00000477988 SLC6A18Q96N87 628 aa6.36□□□□□ -1.39
NCKAP1-204ENST00000477988 DSCC1Q9BVC3 393 aa6.36□□□□□ -1.39
NCKAP1-204ENST00000477988 SLC12A9Q9BXP2 914 aa6.36□□□□□ -1.39
NCKAP1-204ENST00000477988 VTI1BQ9UEU0 232 aa6.36□□□□□ -1.39
NCKAP1-204ENST00000477988 GSTM1P09488 218 aa6.35□□□□□ -1.39
NCKAP1-204ENST00000477988 CWF19L1Q69YN2 538 aaKnown RBP6.35□□□□□ -1.39
NCKAP1-204ENST00000477988 C7orf61Q8IZ16 206 aa6.35□□□□□ -1.39
NCKAP1-204ENST00000477988 NLGN2Q8NFZ4 835 aa6.35□□□□□ -1.39
NCKAP1-204ENST00000477988 SH3RF3Q8TEJ3 882 aaPredicted RBP6.35□□□□□ -1.39
NCKAP1-204ENST00000477988 DHRS1Q96LJ7 313 aa6.35□□□□□ -1.39
NCKAP1-204ENST00000477988 PCED1AQ9H1Q7 454 aa6.35□□□□□ -1.39
NCKAP1-204ENST00000477988 FZD7O75084 574 aa6.34□□□□□ -1.39
NCKAP1-204ENST00000477988 NOP2P46087 812 aaKnown RBP6.34□□□□□ -1.39
NCKAP1-204ENST00000477988 ZNF165P49910 485 aa6.34□□□□□ -1.39
NCKAP1-204ENST00000477988 CDSNQ15517 529 aa6.34□□□□□ -1.39
NCKAP1-204ENST00000477988 INTS3Q68E01 1043 aaKnown RBP6.34□□□□□ -1.39
NCKAP1-204ENST00000477988 BICRALQ6AI39 1079 aa6.34□□□□□ -1.39
NCKAP1-204ENST00000477988 SND1Q7KZF4 910 aaKnown RBP eCLIP6.34□□□□□ -1.39
NCKAP1-204ENST00000477988 FBXO33Q7Z6M2 555 aa6.34□□□□□ -1.39
NCKAP1-204ENST00000477988 TSC22D4Q9Y3Q8 395 aa6.34□□□□□ -1.39
NCKAP1-204ENST00000477988 FGF10O15520 208 aaPredicted RBP6.33□□□□□ -1.4
NCKAP1-204ENST00000477988 MC3RP41968 323 aa6.33□□□□□ -1.4
NCKAP1-204ENST00000477988 CRKP46108 304 aa6.33□□□□□ -1.4
NCKAP1-204ENST00000477988 SARSP49591 514 aaKnown RBP6.33□□□□□ -1.4
NCKAP1-204ENST00000477988 PRR5P85299 388 aa6.33□□□□□ -1.4
NCKAP1-204ENST00000477988 CLCQ05315 142 aa6.33□□□□□ -1.4
NCKAP1-204ENST00000477988 B3GNT8Q7Z7M8 397 aa6.33□□□□□ -1.4
NCKAP1-204ENST00000477988 CHST13Q8NET6 341 aa6.33□□□□□ -1.4
NCKAP1-204ENST00000477988 ZNF296Q8WUU4 475 aaPredicted RBP6.33□□□□□ -1.4
NCKAP1-204ENST00000477988 SPATA6Q9NWH7 488 aaPredicted RBP6.33□□□□□ -1.4
NCKAP1-204ENST00000477988 SUCOQ9UBS9 1254 aaKnown RBP6.33□□□□□ -1.4
NCKAP1-204ENST00000477988 F8W031 263 aaPredicted RBP6.32□□□□□ -1.4
NCKAP1-204ENST00000477988 ASGR2P07307 311 aa6.32□□□□□ -1.4
NCKAP1-204ENST00000477988 ANKRD39Q53RE8 183 aa6.32□□□□□ -1.4
NCKAP1-204ENST00000477988 GK5Q6ZS86 529 aa6.32□□□□□ -1.4
NCKAP1-204ENST00000477988 RGS22Q8NE09 1264 aa6.32□□□□□ -1.4
NCKAP1-204ENST00000477988 SMARCC1Q92922 1105 aaPredicted RBP6.32□□□□□ -1.4
NCKAP1-204ENST00000477988 ZNF747Q9BV97 191 aa6.32□□□□□ -1.4
NCKAP1-204ENST00000477988 TRAIPQ9BWF2 469 aa6.32□□□□□ -1.4
NCKAP1-204ENST00000477988 COPRSQ9NQ92 184 aa6.32□□□□□ -1.4
NCKAP1-204ENST00000477988 DBR1Q9UK59 544 aaKnown RBP6.32□□□□□ -1.4
NCKAP1-204ENST00000477988 SHOXO15266 292 aa6.31□□□□□ -1.4
NCKAP1-204ENST00000477988 TBC1D8O95759 1140 aa6.31□□□□□ -1.4
NCKAP1-204ENST00000477988 SEZ6Q53EL9 994 aa6.31□□□□□ -1.4
NCKAP1-204ENST00000477988 DNAJC14Q6Y2X3 702 aaPredicted RBP6.31□□□□□ -1.4
NCKAP1-204ENST00000477988 SLC9A7Q96T83 725 aa6.31□□□□□ -1.4
NCKAP1-204ENST00000477988 ST6GALNAC2Q9UJ37 374 aa6.31□□□□□ -1.4
NCKAP1-204ENST00000477988 MCM4P33991 863 aa6.3□□□□□ -1.4
NCKAP1-204ENST00000477988 USP51Q70EK9 711 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms