RNA–Protein interactions for RNA: ENST00000477477.1

HDLBP-236, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 340 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-236ENST00000477477 TNFAIP2Q03169 654 aa13.42□□□□□ -0.26
HDLBP-236ENST00000477477 RRP12Q5JTH9 1297 aaKnown RBP13.42□□□□□ -0.26
HDLBP-236ENST00000477477 ZNF589Q86UQ0 364 aaPredicted RBP13.42□□□□□ -0.26
HDLBP-236ENST00000477477 RANBP17Q9H2T7 1088 aaKnown RBP13.42□□□□□ -0.26
HDLBP-236ENST00000477477 TOMM22Q9NS69 142 aa13.42□□□□□ -0.26
HDLBP-236ENST00000477477 CYP39A1Q9NYL5 469 aa13.42□□□□□ -0.26
HDLBP-236ENST00000477477 GNEQ9Y223 722 aaKnown RBP13.42□□□□□ -0.26
HDLBP-236ENST00000477477 TOP1P11387 765 aaKnown RBP13.41□□□□□ -0.26
HDLBP-236ENST00000477477 SLC16A2P36021 539 aa13.41□□□□□ -0.26
HDLBP-236ENST00000477477 BEX3Q00994 111 aa13.41□□□□□ -0.26
HDLBP-236ENST00000477477 NMIQ13287 307 aaPredicted RBP13.41□□□□□ -0.26
HDLBP-236ENST00000477477 SYDE2Q5VT97 1194 aa13.41□□□□□ -0.26
HDLBP-236ENST00000477477 TTBK2Q6IQ55 1244 aa13.41□□□□□ -0.26
HDLBP-236ENST00000477477 BTNL9Q6UXG8 535 aa13.41□□□□□ -0.26
HDLBP-236ENST00000477477 NOL8Q76FK4 1167 aaKnown RBP13.41□□□□□ -0.26
HDLBP-236ENST00000477477 TLK2Q86UE8 772 aa13.41□□□□□ -0.26
HDLBP-236ENST00000477477 FAM126BQ8IXS8 530 aa13.41□□□□□ -0.26
HDLBP-236ENST00000477477 VTI1AQ96AJ9 217 aa13.41□□□□□ -0.26
HDLBP-236ENST00000477477 CDX2Q99626 313 aaPredicted RBP13.41□□□□□ -0.26
HDLBP-236ENST00000477477 TMEM47Q9BQJ4 181 aa13.41□□□□□ -0.26
HDLBP-236ENST00000477477 LNPKQ9C0E8 428 aa13.41□□□□□ -0.26
HDLBP-236ENST00000477477 TTYH1Q9H313 450 aaPredicted RBP13.41□□□□□ -0.26
HDLBP-236ENST00000477477 SEMA6BQ9H3T3 888 aa13.41□□□□□ -0.26
HDLBP-236ENST00000477477 TCP11L1Q9NUJ3 509 aa13.41□□□□□ -0.26
HDLBP-236ENST00000477477 DDX49Q9Y6V7 483 aaKnown RBP13.41□□□□□ -0.26
HDLBP-236ENST00000477477 FRMPD2Q68DX3 1309 aaPredicted RBP13.4□□□□□ -0.26
HDLBP-236ENST00000477477 CCDC171Q6TFL3 1326 aa13.4□□□□□ -0.26
HDLBP-236ENST00000477477 UNC80Q8N2C7 3258 aa13.4□□□□□ -0.26
HDLBP-236ENST00000477477 MCM3APO60318 1980 aa13.4□□□□□ -0.26
HDLBP-236ENST00000477477 CUL9Q8IWT3 2517 aa13.4□□□□□ -0.26
HDLBP-236ENST00000477477 LRRC37A2A6NM11 1700 aa13.4□□□□□ -0.26
HDLBP-236ENST00000477477 TMEM265A0A087WTH1 108 aa13.4□□□□□ -0.26
HDLBP-236ENST00000477477 SMPD1P17405 629 aa13.4□□□□□ -0.26
HDLBP-236ENST00000477477 HAND2P61296 217 aa13.4□□□□□ -0.26
HDLBP-236ENST00000477477 AAMPQ13685 434 aa13.4□□□□□ -0.26
HDLBP-236ENST00000477477 MFSD5Q6N075 450 aa13.4□□□□□ -0.26
HDLBP-236ENST00000477477 NSMFQ6X4W1 530 aa13.4□□□□□ -0.26
HDLBP-236ENST00000477477 FBXO16Q8IX29 292 aaPredicted RBP13.4□□□□□ -0.26
HDLBP-236ENST00000477477 MORC4Q8TE76 937 aa13.4□□□□□ -0.26
HDLBP-236ENST00000477477 TRIM6-TRIM34B2RNG4 842 aa13.39□□□□□ -0.27
HDLBP-236ENST00000477477 TLR3O15455 904 aaKnown RBP13.39□□□□□ -0.27
HDLBP-236ENST00000477477 CABYRO75952 493 aa13.39□□□□□ -0.27
HDLBP-236ENST00000477477 PDHBP11177 359 aa13.39□□□□□ -0.27
HDLBP-236ENST00000477477 PCP11498 1178 aaKnown RBP13.39□□□□□ -0.27
HDLBP-236ENST00000477477 PTGS1P23219 599 aa13.39□□□□□ -0.27
HDLBP-236ENST00000477477 PPIGQ13427 754 aaKnown RBP eCLIP13.39□□□□□ -0.271e-7■□□□□ 9.1
HDLBP-236ENST00000477477 FSCN1Q16658 493 aaKnown RBP13.39□□□□□ -0.27
HDLBP-236ENST00000477477 IQSEC1Q6DN90 963 aa13.39□□□□□ -0.27
HDLBP-236ENST00000477477 TAPT1Q6NXT6 567 aa13.39□□□□□ -0.27
HDLBP-236ENST00000477477 CXCL17Q6UXB2 119 aa13.39□□□□□ -0.27
HDLBP-236ENST00000477477 EEPD1Q7L9B9 569 aa13.39□□□□□ -0.27
HDLBP-236ENST00000477477 TBC1D10CQ8IV04 446 aa13.39□□□□□ -0.27
HDLBP-236ENST00000477477 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.39□□□□□ -0.27
HDLBP-236ENST00000477477 SMC5Q8IY18 1101 aa13.39□□□□□ -0.27
HDLBP-236ENST00000477477 SLC43A3Q8NBI5 491 aa13.39□□□□□ -0.27
HDLBP-236ENST00000477477 RILPL2Q969X0 211 aa13.39□□□□□ -0.27
HDLBP-236ENST00000477477 PURBQ96QR8 312 aaKnown RBP13.39□□□□□ -0.27
HDLBP-236ENST00000477477 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.39□□□□□ -0.273e-13■□□□□ 9.9
HDLBP-236ENST00000477477 VTA1Q9NP79 307 aa13.39□□□□□ -0.27
HDLBP-236ENST00000477477 GPCPD1Q9NPB8 672 aa13.39□□□□□ -0.27
HDLBP-236ENST00000477477 PDGFCQ9NRA1 345 aa13.39□□□□□ -0.27
HDLBP-236ENST00000477477 CDH23Q9H251 3354 aa13.38□□□□□ -0.27
HDLBP-236ENST00000477477 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.38□□□□□ -0.27
HDLBP-236ENST00000477477 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.38□□□□□ -0.27
HDLBP-236ENST00000477477 NFIBO00712 420 aa13.38□□□□□ -0.27
HDLBP-236ENST00000477477 DYNC1LI2O43237 492 aaPredicted RBP13.38□□□□□ -0.27
HDLBP-236ENST00000477477 CD4P01730 458 aa13.38□□□□□ -0.27
HDLBP-236ENST00000477477 BAATQ14032 418 aaPredicted RBP13.38□□□□□ -0.27
HDLBP-236ENST00000477477 AKNAD1Q5T1N1 836 aa13.38□□□□□ -0.27
HDLBP-236ENST00000477477 MYLIPQ8WY64 445 aa13.38□□□□□ -0.27
HDLBP-236ENST00000477477 PPP1R12CQ9BZL4 782 aa13.38□□□□□ -0.27
HDLBP-236ENST00000477477 AP5M1Q9H0R1 490 aa13.38□□□□□ -0.27
HDLBP-236ENST00000477477 ADD3Q9UEY8 706 aaKnown RBP13.38□□□□□ -0.27
HDLBP-236ENST00000477477 Q9Y3F1 56 aa13.38□□□□□ -0.27
HDLBP-236ENST00000477477 LOC102724159A0A0B4J2E5 919 aa13.37□□□□□ -0.27
HDLBP-236ENST00000477477 ZEB2O60315 1214 aa13.37□□□□□ -0.27
HDLBP-236ENST00000477477 SNHG28P0DPA3 235 aa13.37□□□□□ -0.27
HDLBP-236ENST00000477477 CSF2RAP15509 400 aa13.37□□□□□ -0.27
HDLBP-236ENST00000477477 SDSP20132 328 aa13.37□□□□□ -0.27
HDLBP-236ENST00000477477 DNAJB2P25686 324 aa13.37□□□□□ -0.27
HDLBP-236ENST00000477477 ALDH5A1P51649 535 aaPredicted RBP13.37□□□□□ -0.27
HDLBP-236ENST00000477477 MFAP1P55081 439 aaKnown RBP13.37□□□□□ -0.27
HDLBP-236ENST00000477477 ZNF543Q08ER8 600 aa13.37□□□□□ -0.27
HDLBP-236ENST00000477477 ITGA7Q13683 1181 aa13.37□□□□□ -0.27
HDLBP-236ENST00000477477 PWP2Q15269 919 aaKnown RBP13.37□□□□□ -0.27
HDLBP-236ENST00000477477 TMEM240Q5SV17 173 aa13.37□□□□□ -0.27
HDLBP-236ENST00000477477 TMEM63BQ5T3F8 832 aa13.37□□□□□ -0.27
HDLBP-236ENST00000477477 SLC30A10Q6XR72 485 aa13.37□□□□□ -0.27
HDLBP-236ENST00000477477 MFSD6Q6ZSS7 791 aa13.37□□□□□ -0.27
HDLBP-236ENST00000477477 KIAA1211Q6ZU35 1233 aa13.37□□□□□ -0.27
HDLBP-236ENST00000477477 C16orf59Q7L2K0 433 aa13.37□□□□□ -0.27
HDLBP-236ENST00000477477 TMEM199Q8N511 208 aa13.37□□□□□ -0.27
HDLBP-236ENST00000477477 MAFAQ8NHW3 353 aaPredicted RBP13.37□□□□□ -0.27
HDLBP-236ENST00000477477 CLEC4DQ8WXI8 215 aa13.37□□□□□ -0.27
HDLBP-236ENST00000477477 TTC14Q96N46 770 aa13.37□□□□□ -0.27
HDLBP-236ENST00000477477 RWDD1Q9H446 243 aaPredicted RBP13.37□□□□□ -0.27
HDLBP-236ENST00000477477 OSBPL3Q9H4L5 887 aa13.37□□□□□ -0.27
HDLBP-236ENST00000477477 RNF41Q9H4P4 317 aaPredicted RBP13.37□□□□□ -0.27
HDLBP-236ENST00000477477 PNMA2Q9UL42 364 aa13.37□□□□□ -0.27
HDLBP-236ENST00000477477 EYSQ5T1H1 3165 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms