RNA–Protein interactions for RNA: ENST00000477446.5

EPHB4-204, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 1,551 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-204ENST00000477446 HSPA1BP0DMV9 641 aaKnown RBP19.44■□□□□ 0.7
EPHB4-204ENST00000477446 TAL1P17542 331 aaPredicted RBP19.44■□□□□ 0.7
EPHB4-204ENST00000477446 SYT1P21579 422 aa19.44■□□□□ 0.7
EPHB4-204ENST00000477446 SP3Q02447 781 aa19.44■□□□□ 0.7
EPHB4-204ENST00000477446 NOM1Q5C9Z4 860 aaKnown RBP19.44■□□□□ 0.7
EPHB4-204ENST00000477446 FBXO11Q86XK2 927 aa19.44■□□□□ 0.7
EPHB4-204ENST00000477446 RIOX2Q8IUF8 465 aa19.44■□□□□ 0.7
EPHB4-204ENST00000477446 PORCNQ9H237 461 aa19.44■□□□□ 0.7
EPHB4-204ENST00000477446 SEC63Q9UGP8 760 aaKnown RBP19.44■□□□□ 0.7
EPHB4-204ENST00000477446 CCPG1Q9ULG6 757 aa19.44■□□□□ 0.7
EPHB4-204ENST00000477446 FOXN1O15353 648 aa19.43■□□□□ 0.7
EPHB4-204ENST00000477446 PRPF3O43395 683 aaKnown RBP19.43■□□□□ 0.7
EPHB4-204ENST00000477446 CCNA1P78396 465 aa19.43■□□□□ 0.7
EPHB4-204ENST00000477446 SLC26A6Q9BXS9 759 aa19.43■□□□□ 0.7
EPHB4-204ENST00000477446 RNF26Q9BY78 433 aaPredicted RBP19.43■□□□□ 0.7
EPHB4-204ENST00000477446 MGAMO43451 1857 aa19.43■□□□□ 0.7
EPHB4-204ENST00000477446 CDKL5O76039 1030 aa19.42■□□□□ 0.7
EPHB4-204ENST00000477446 ECM2O94769 699 aaPredicted RBP19.42■□□□□ 0.7
EPHB4-204ENST00000477446 FMNL1O95466 1100 aaPredicted RBP19.42■□□□□ 0.7
EPHB4-204ENST00000477446 SLC25A27O95847 323 aa19.42■□□□□ 0.7
EPHB4-204ENST00000477446 NCLP19338 710 aaKnown RBP19.42■□□□□ 0.7
EPHB4-204ENST00000477446 ERCC3P19447 782 aa19.42■□□□□ 0.7
EPHB4-204ENST00000477446 GJB2P29033 226 aa19.42■□□□□ 0.7
EPHB4-204ENST00000477446 LACTBP83111 547 aaPredicted RBP19.42■□□□□ 0.7
EPHB4-204ENST00000477446 SSRP1Q08945 709 aaKnown RBP19.42■□□□□ 0.7
EPHB4-204ENST00000477446 CSPP1Q1MSJ5 1256 aa19.42■□□□□ 0.7
EPHB4-204ENST00000477446 USH1GQ495M9 461 aa19.42■□□□□ 0.7
EPHB4-204ENST00000477446 NCAPG2Q86XI2 1143 aa19.42■□□□□ 0.7
EPHB4-204ENST00000477446 ZNF296Q8WUU4 475 aaPredicted RBP19.42■□□□□ 0.7
EPHB4-204ENST00000477446 AMNQ9BXJ7 453 aa19.42■□□□□ 0.7
EPHB4-204ENST00000477446 EFCC1Q9HA90 598 aa19.42■□□□□ 0.7
EPHB4-204ENST00000477446 ZSWIM8A7E2V4 1837 aa19.42■□□□□ 0.7
EPHB4-204ENST00000477446 ALAS1P13196 640 aa19.41■□□□□ 0.7
EPHB4-204ENST00000477446 TRIM22Q8IYM9 498 aa19.41■□□□□ 0.7
EPHB4-204ENST00000477446 NSUN7Q8NE18 718 aaKnown RBP19.41■□□□□ 0.7
EPHB4-204ENST00000477446 SHCBP1Q8NEM2 672 aa19.41■□□□□ 0.7
EPHB4-204ENST00000477446 HOMER2Q9NSB8 354 aa19.41■□□□□ 0.7
EPHB4-204ENST00000477446 PNMA2Q9UL42 364 aa19.41■□□□□ 0.7
EPHB4-204ENST00000477446 FKTNO75072 461 aa19.4■□□□□ 0.7
EPHB4-204ENST00000477446 CTGFP29279 349 aa19.4■□□□□ 0.7
EPHB4-204ENST00000477446 AKAP17AQ02040 695 aaKnown RBP19.4■□□□□ 0.7
EPHB4-204ENST00000477446 PKN1Q16512 942 aa19.4■□□□□ 0.7
EPHB4-204ENST00000477446 CCAR1Q8IX12 1150 aaKnown RBP19.4■□□□□ 0.7
EPHB4-204ENST00000477446 TMEM87AQ8NBN3 555 aa19.4■□□□□ 0.7
EPHB4-204ENST00000477446 COA7Q96BR5 231 aa19.4■□□□□ 0.7
EPHB4-204ENST00000477446 TRERF1Q96PN7 1200 aa19.4■□□□□ 0.7
EPHB4-204ENST00000477446 RBM27Q9P2N5 1060 aaKnown RBP19.4■□□□□ 0.7
EPHB4-204ENST00000477446 PCDHA1Q9Y5I3 950 aa19.4■□□□□ 0.7
EPHB4-204ENST00000477446 JAK2O60674 1132 aa19.4■□□□□ 0.7
EPHB4-204ENST00000477446 F13A1P00488 732 aa19.4■□□□□ 0.7
EPHB4-204ENST00000477446 HSPA8P11142 646 aaKnown RBP19.4■□□□□ 0.7
EPHB4-204ENST00000477446 MAPK4P31152 587 aa19.4■□□□□ 0.7
EPHB4-204ENST00000477446 COPB2P35606 906 aa19.4■□□□□ 0.7
EPHB4-204ENST00000477446 ZNF445P59923 1031 aa19.4■□□□□ 0.7
EPHB4-204ENST00000477446 CAP1Q01518 475 aa19.4■□□□□ 0.7
EPHB4-204ENST00000477446 PFKFB3Q16875 520 aaPredicted RBP19.4■□□□□ 0.7
EPHB4-204ENST00000477446 TKFCQ3LXA3 575 aa19.4■□□□□ 0.7
EPHB4-204ENST00000477446 MUM1L1Q5H9M0 696 aa19.4■□□□□ 0.7
EPHB4-204ENST00000477446 WDR78Q5VTH9 848 aa19.4■□□□□ 0.7
EPHB4-204ENST00000477446 LLPHQ9BRT6 129 aaKnown RBP19.4■□□□□ 0.7
EPHB4-204ENST00000477446 ARHGAP39Q9C0H5 1083 aa19.4■□□□□ 0.7
EPHB4-204ENST00000477446 MROH8Q9H579 483 aa19.4■□□□□ 0.7
EPHB4-204ENST00000477446 RNF146Q9NTX7 359 aa19.4■□□□□ 0.7
EPHB4-204ENST00000477446 ABCB11O95342 1321 aa19.39■□□□□ 0.69
EPHB4-204ENST00000477446 PTPDC1A2A3K4 754 aa19.39■□□□□ 0.69
EPHB4-204ENST00000477446 SCG2P13521 617 aa19.39■□□□□ 0.69
EPHB4-204ENST00000477446 FDPSP14324 419 aaKnown RBP19.39■□□□□ 0.69
EPHB4-204ENST00000477446 HEATR3Q7Z4Q2 680 aa19.39■□□□□ 0.69
EPHB4-204ENST00000477446 CHST13Q8NET6 341 aa19.39■□□□□ 0.69
EPHB4-204ENST00000477446 CD99L2Q8TCZ2 262 aa19.39■□□□□ 0.69
EPHB4-204ENST00000477446 GPKOWQ92917 476 aaPredicted RBP eCLIP19.39■□□□□ 0.69
EPHB4-204ENST00000477446 DOCK3Q8IZD9 2030 aa19.38■□□□□ 0.69
EPHB4-204ENST00000477446 PLXNB2O15031 1838 aa19.38■□□□□ 0.69
EPHB4-204ENST00000477446 STK36Q9NRP7 1315 aa19.38■□□□□ 0.69
EPHB4-204ENST00000477446 DEXIO95424 95 aa19.38■□□□□ 0.69
EPHB4-204ENST00000477446 PSMC4P43686 418 aa19.38■□□□□ 0.69
EPHB4-204ENST00000477446 TRAF1Q13077 416 aa19.38■□□□□ 0.69
EPHB4-204ENST00000477446 KIF22Q14807 665 aa19.38■□□□□ 0.69
EPHB4-204ENST00000477446 FOXD4L5Q5VV16 416 aaPredicted RBP19.38■□□□□ 0.69
EPHB4-204ENST00000477446 WWC2Q6AWC2 1192 aa19.38■□□□□ 0.69
EPHB4-204ENST00000477446 GPR142Q7Z601 462 aa19.38■□□□□ 0.69
EPHB4-204ENST00000477446 CLEC4DQ8WXI8 215 aa19.38■□□□□ 0.69
EPHB4-204ENST00000477446 FOXD4L4Q8WXT5 416 aaPredicted RBP19.38■□□□□ 0.69
EPHB4-204ENST00000477446 DDX11Q96FC9 970 aa19.38■□□□□ 0.69
EPHB4-204ENST00000477446 TRIM47Q96LD4 638 aa19.38■□□□□ 0.69
EPHB4-204ENST00000477446 ORC3Q9UBD5 711 aaPredicted RBP19.38■□□□□ 0.69
EPHB4-204ENST00000477446 CASP8AP2Q9UKL3 1982 aa19.37■□□□□ 0.69
EPHB4-204ENST00000477446 ZNFX1Q9P2E3 1918 aaKnown RBP19.37■□□□□ 0.69
EPHB4-204ENST00000477446 CTCFP49711 727 aaPredicted RBP19.37■□□□□ 0.69
EPHB4-204ENST00000477446 FCGRTP55899 365 aa19.37■□□□□ 0.69
EPHB4-204ENST00000477446 IFFO2Q5TF58 517 aa19.37■□□□□ 0.69
EPHB4-204ENST00000477446 LARP1BQ659C4 914 aaKnown RBP19.37■□□□□ 0.69
EPHB4-204ENST00000477446 PLEKHH3Q7Z736 793 aa19.37■□□□□ 0.69
EPHB4-204ENST00000477446 SMARCC2Q8TAQ2 1214 aa19.37■□□□□ 0.69
EPHB4-204ENST00000477446 SYAP1Q96A49 352 aaPredicted RBP19.37■□□□□ 0.69
EPHB4-204ENST00000477446 ERO1AQ96HE7 468 aa19.37■□□□□ 0.69
EPHB4-204ENST00000477446 ACAD9Q9H845 621 aa19.37■□□□□ 0.69
EPHB4-204ENST00000477446 GRPEL1Q9HAV7 217 aa19.37■□□□□ 0.69
EPHB4-204ENST00000477446 FBXO40Q9UH90 709 aa19.37■□□□□ 0.69
EPHB4-204ENST00000477446 MTMR6Q9Y217 621 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms