RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 SGIP1Q9BQI5 828 aa18.54■□□□□ 0.56
TMEM53-208ENST00000476724 MRIQ9BWK5 157 aa18.54■□□□□ 0.56
TMEM53-208ENST00000476724 OGFRQ9NZT2 677 aa18.54■□□□□ 0.56
TMEM53-208ENST00000476724 SIPA1L1O43166 1804 aa18.54■□□□□ 0.56
TMEM53-208ENST00000476724 FER1L6Q2WGJ9 1857 aa18.54■□□□□ 0.56
TMEM53-208ENST00000476724 UBA7P41226 1012 aa18.54■□□□□ 0.56
TMEM53-208ENST00000476724 NOVP48745 357 aa18.54■□□□□ 0.56
TMEM53-208ENST00000476724 CNGA4Q8IV77 575 aa18.54■□□□□ 0.56
TMEM53-208ENST00000476724 RASGRP4Q8TDF6 673 aa18.54■□□□□ 0.56
TMEM53-208ENST00000476724 CUEDC2Q9H467 287 aa18.54■□□□□ 0.56
TMEM53-208ENST00000476724 MAGEF1Q9HAY2 307 aa18.54■□□□□ 0.56
TMEM53-208ENST00000476724 C6orf50Q9HD87 102 aa18.54■□□□□ 0.56
TMEM53-208ENST00000476724 H7C1D1 291 aa18.53■□□□□ 0.56
TMEM53-208ENST00000476724 HDLBPQ00341 1268 aaKnown RBP18.53■□□□□ 0.56
TMEM53-208ENST00000476724 GABPAQ06546 454 aa18.53■□□□□ 0.56
TMEM53-208ENST00000476724 ORC2Q13416 577 aaPredicted RBP18.53■□□□□ 0.56
TMEM53-208ENST00000476724 INF2Q27J81 1249 aa18.53■□□□□ 0.56
TMEM53-208ENST00000476724 RRP36Q96EU6 259 aaKnown RBP18.53■□□□□ 0.56
TMEM53-208ENST00000476724 PSMD14O00487 310 aa18.53■□□□□ 0.56
TMEM53-208ENST00000476724 CCDC175P0C221 793 aa18.53■□□□□ 0.56
TMEM53-208ENST00000476724 RBL2Q08999 1139 aa18.53■□□□□ 0.56
TMEM53-208ENST00000476724 TRIM14Q14142 442 aa18.53■□□□□ 0.56
TMEM53-208ENST00000476724 KARSQ15046 597 aaKnown RBP18.53■□□□□ 0.56
TMEM53-208ENST00000476724 SERPINA10Q9UK55 444 aa18.53■□□□□ 0.56
TMEM53-208ENST00000476724 hCG_1984214I3L0E3 225 aa18.52■□□□□ 0.56
TMEM53-208ENST00000476724 TCP10Q12799 353 aa18.52■□□□□ 0.56
TMEM53-208ENST00000476724 ELF2Q15723 593 aa18.52■□□□□ 0.56
TMEM53-208ENST00000476724 DALRD3Q5D0E6 543 aaKnown RBP18.52■□□□□ 0.56
TMEM53-208ENST00000476724 ZNF713Q8N859 430 aaPredicted RBP18.52■□□□□ 0.56
TMEM53-208ENST00000476724 NELFBQ8WX92 580 aa18.52■□□□□ 0.56
TMEM53-208ENST00000476724 GTPBP4Q9BZE4 634 aaKnown RBP18.52■□□□□ 0.56
TMEM53-208ENST00000476724 SEC63Q9UGP8 760 aaKnown RBP18.52■□□□□ 0.56
TMEM53-208ENST00000476724 CASQ1P31415 396 aa18.51■□□□□ 0.55
TMEM53-208ENST00000476724 NAPAP54920 295 aa18.51■□□□□ 0.55
TMEM53-208ENST00000476724 NONOQ15233 471 aaKnown RBP eCLIP18.51■□□□□ 0.55
TMEM53-208ENST00000476724 TOGARAM2Q6ZUX3 1019 aa18.51■□□□□ 0.55
TMEM53-208ENST00000476724 RASSF8Q8NHQ8 419 aa18.51■□□□□ 0.55
TMEM53-208ENST00000476724 TMEM60Q9H2L4 133 aa18.51■□□□□ 0.55
TMEM53-208ENST00000476724 KBTBD4Q9NVX7 518 aa18.51■□□□□ 0.55
TMEM53-208ENST00000476724 FAM198AQ9UFP1 575 aa18.51■□□□□ 0.55
TMEM53-208ENST00000476724 DDX41Q9UJV9 622 aaKnown RBP18.51■□□□□ 0.55
TMEM53-208ENST00000476724 N4BP3O15049 544 aa18.51■□□□□ 0.55
TMEM53-208ENST00000476724 MFAP3LO75121 409 aa18.51■□□□□ 0.55
TMEM53-208ENST00000476724 URI1O94763 535 aaPredicted RBP18.51■□□□□ 0.55
TMEM53-208ENST00000476724 FECHP22830 423 aa18.51■□□□□ 0.55
TMEM53-208ENST00000476724 CBX1P83916 185 aa18.51■□□□□ 0.55
TMEM53-208ENST00000476724 STIM1Q13586 685 aa18.51■□□□□ 0.55
TMEM53-208ENST00000476724 KRT31Q15323 416 aa18.51■□□□□ 0.55
TMEM53-208ENST00000476724 NAALADL2Q58DX5 795 aa18.51■□□□□ 0.55
TMEM53-208ENST00000476724 TCP11X2Q5H9J9 407 aa18.51■□□□□ 0.55
TMEM53-208ENST00000476724 SOGA3Q5TF21 947 aa18.51■□□□□ 0.55
TMEM53-208ENST00000476724 RSBN1LQ6PCB5 846 aaPredicted RBP18.51■□□□□ 0.55
TMEM53-208ENST00000476724 RASGRP2Q7LDG7 609 aa18.51■□□□□ 0.55
TMEM53-208ENST00000476724 PRMT6Q96LA8 375 aaPredicted RBP18.51■□□□□ 0.55
TMEM53-208ENST00000476724 TDRD3Q9H7E2 651 aaKnown RBP18.51■□□□□ 0.55
TMEM53-208ENST00000476724 ZBTB12Q9Y330 459 aaPredicted RBP18.51■□□□□ 0.55
TMEM53-208ENST00000476724 ESYT2A0FGR8 921 aa18.5■□□□□ 0.55
TMEM53-208ENST00000476724 SMCO2A6NFE2 343 aa18.5■□□□□ 0.55
TMEM53-208ENST00000476724 GOLGA8HP0CJ92 632 aa18.5■□□□□ 0.55
TMEM53-208ENST00000476724 CDC25AP30304 524 aa18.5■□□□□ 0.55
TMEM53-208ENST00000476724 PRCPP42785 496 aa18.5■□□□□ 0.55
TMEM53-208ENST00000476724 PTGER2P43116 358 aa18.5■□□□□ 0.55
TMEM53-208ENST00000476724 GNG11P61952 73 aa18.5■□□□□ 0.55
TMEM53-208ENST00000476724 KMT5BQ4FZB7 885 aa18.5■□□□□ 0.55
TMEM53-208ENST00000476724 ADSSL1Q8N142 457 aa18.5■□□□□ 0.55
TMEM53-208ENST00000476724 MNS1Q8NEH6 495 aa18.5■□□□□ 0.55
TMEM53-208ENST00000476724 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.5■□□□□ 0.55
TMEM53-208ENST00000476724 MTMR7Q9Y216 660 aa18.5■□□□□ 0.55
TMEM53-208ENST00000476724 V9GYY5 206 aaPredicted RBP18.5■□□□□ 0.55
TMEM53-208ENST00000476724 DDTLA6NHG4 134 aaPredicted RBP18.5■□□□□ 0.55
TMEM53-208ENST00000476724 VIL1P09327 827 aaKnown RBP18.5■□□□□ 0.55
TMEM53-208ENST00000476724 OR52Z1P0C646 297 aa18.5■□□□□ 0.55
TMEM53-208ENST00000476724 COPB1P53618 953 aaKnown RBP18.5■□□□□ 0.55
TMEM53-208ENST00000476724 SH3BP5LQ7L8J4 393 aa18.5■□□□□ 0.55
TMEM53-208ENST00000476724 CCDC47Q96A33 483 aaKnown RBP18.5■□□□□ 0.55
TMEM53-208ENST00000476724 CEP95Q96GE4 821 aa18.5■□□□□ 0.55
TMEM53-208ENST00000476724 IDI2Q9BXS1 227 aa18.5■□□□□ 0.55
TMEM53-208ENST00000476724 SERPINB13Q9UIV8 391 aa18.5■□□□□ 0.55
TMEM53-208ENST00000476724 PLIN4Q96Q06 1357 aa18.49■□□□□ 0.55
TMEM53-208ENST00000476724 EFCAB8A8MWE9 144 aa18.49■□□□□ 0.55
TMEM53-208ENST00000476724 KCNJ18B7U540 433 aa18.49■□□□□ 0.55
TMEM53-208ENST00000476724 RHOBTB3O94955 611 aa18.49■□□□□ 0.55
TMEM53-208ENST00000476724 AKR1B1P15121 316 aa18.49■□□□□ 0.55
TMEM53-208ENST00000476724 KCNJ12Q14500 433 aa18.49■□□□□ 0.55
TMEM53-208ENST00000476724 ERCC6LQ2NKX8 1250 aa18.49■□□□□ 0.55
TMEM53-208ENST00000476724 NEK8Q86SG6 692 aa18.49■□□□□ 0.55
TMEM53-208ENST00000476724 UBXN4Q92575 508 aa18.49■□□□□ 0.55
TMEM53-208ENST00000476724 RIOX1Q9H6W3 641 aa18.49■□□□□ 0.55
TMEM53-208ENST00000476724 UTRNP46939 3433 aa18.48■□□□□ 0.55
TMEM53-208ENST00000476724 CASP14P31944 242 aa18.48■□□□□ 0.55
TMEM53-208ENST00000476724 SHMT1P34896 483 aa18.48■□□□□ 0.55
TMEM53-208ENST00000476724 PPP1R2P41236 205 aa18.48■□□□□ 0.55
TMEM53-208ENST00000476724 FBXO38Q6PIJ6 1188 aa18.48■□□□□ 0.55
TMEM53-208ENST00000476724 USP17L2Q6R6M4 530 aa18.48■□□□□ 0.55
TMEM53-208ENST00000476724 TMTC1Q8IUR5 882 aa18.48■□□□□ 0.55
TMEM53-208ENST00000476724 NOC3LQ8WTT2 800 aaKnown RBP18.48■□□□□ 0.55
TMEM53-208ENST00000476724 GMLQ99445 158 aa18.48■□□□□ 0.55
TMEM53-208ENST00000476724 DNAJC18Q9H819 358 aa18.48■□□□□ 0.55
TMEM53-208ENST00000476724 ADGRG1Q9Y653 693 aa18.48■□□□□ 0.55
TMEM53-208ENST00000476724 FAM196BA6NMK8 535 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms