RNA–Protein interactions for RNA: ENST00000476513.1

APOBEC3F-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 3

Gene APOBEC3F, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-203ENST00000476513 ASB14A6NK59 587 aa19.65■□□□□ 0.74
APOBEC3F-203ENST00000476513 MINDY4BA8MYZ0 360 aa19.65■□□□□ 0.74
APOBEC3F-203ENST00000476513 ZEB2O60315 1214 aa19.65■□□□□ 0.74
APOBEC3F-203ENST00000476513 RPAP2Q8IXW5 612 aaPredicted RBP19.65■□□□□ 0.74
APOBEC3F-203ENST00000476513 LRRC47Q8N1G4 583 aaKnown RBP19.65■□□□□ 0.74
APOBEC3F-203ENST00000476513 CEP95Q96GE4 821 aa19.65■□□□□ 0.74
APOBEC3F-203ENST00000476513 AGBL1Q96MI9 1066 aa19.65■□□□□ 0.74
APOBEC3F-203ENST00000476513 MTMR4Q9NYA4 1195 aa19.65■□□□□ 0.74
APOBEC3F-203ENST00000476513 DDX49Q9Y6V7 483 aaKnown RBP19.65■□□□□ 0.74
APOBEC3F-203ENST00000476513 TCF20Q9UGU0 1960 aaKnown RBP19.64■□□□□ 0.74
APOBEC3F-203ENST00000476513 RFXAPO00287 272 aa19.64■□□□□ 0.73
APOBEC3F-203ENST00000476513 HMMRO75330 724 aa19.64■□□□□ 0.73
APOBEC3F-203ENST00000476513 POU3F3P20264 500 aaPredicted RBP19.64■□□□□ 0.73
APOBEC3F-203ENST00000476513 TTLL4Q14679 1199 aa19.64■□□□□ 0.73
APOBEC3F-203ENST00000476513 GIMAP6Q6P9H5 292 aa19.64■□□□□ 0.73
APOBEC3F-203ENST00000476513 GMCL1P1Q8NEA9 526 aa19.64■□□□□ 0.73
APOBEC3F-203ENST00000476513 PDGFCQ9NRA1 345 aa19.64■□□□□ 0.73
APOBEC3F-203ENST00000476513 RNF146Q9NTX7 359 aa19.64■□□□□ 0.73
APOBEC3F-203ENST00000476513 SYNPO2Q9UMS6 1093 aa19.64■□□□□ 0.73
APOBEC3F-203ENST00000476513 MTCH2Q9Y6C9 303 aa19.64■□□□□ 0.73
APOBEC3F-203ENST00000476513 PRDM1O75626 825 aa19.63■□□□□ 0.73
APOBEC3F-203ENST00000476513 FDX1P10109 184 aa19.63■□□□□ 0.73
APOBEC3F-203ENST00000476513 BMP3P12645 472 aa19.63■□□□□ 0.73
APOBEC3F-203ENST00000476513 TMEM63BQ5T3F8 832 aa19.63■□□□□ 0.73
APOBEC3F-203ENST00000476513 SLFN13Q68D06 897 aa19.63■□□□□ 0.73
APOBEC3F-203ENST00000476513 ALDH8A1Q9H2A2 487 aaPredicted RBP19.63■□□□□ 0.73
APOBEC3F-203ENST00000476513 EPHX3Q9H6B9 360 aa19.63■□□□□ 0.73
APOBEC3F-203ENST00000476513 COG6Q9Y2V7 657 aa19.63■□□□□ 0.73
APOBEC3F-203ENST00000476513 PRRC2BQ5JSZ5 2229 aaKnown RBP19.63■□□□□ 0.73
APOBEC3F-203ENST00000476513 CHD7Q9P2D1 2997 aa19.62■□□□□ 0.73
APOBEC3F-203ENST00000476513 ZNF536O15090 1300 aa19.62■□□□□ 0.73
APOBEC3F-203ENST00000476513 TMEM232C9JQI7 657 aa19.62■□□□□ 0.73
APOBEC3F-203ENST00000476513 GTPBP6O43824 516 aaPredicted RBP19.62■□□□□ 0.73
APOBEC3F-203ENST00000476513 TTLL1O95922 423 aa19.62■□□□□ 0.73
APOBEC3F-203ENST00000476513 CA3P07451 260 aa19.62■□□□□ 0.73
APOBEC3F-203ENST00000476513 PFKMP08237 780 aa19.62■□□□□ 0.73
APOBEC3F-203ENST00000476513 TMEM67Q5HYA8 995 aa19.62■□□□□ 0.73
APOBEC3F-203ENST00000476513 IQSEC1Q6DN90 963 aa19.62■□□□□ 0.73
APOBEC3F-203ENST00000476513 TAPT1Q6NXT6 567 aa19.62■□□□□ 0.73
APOBEC3F-203ENST00000476513 ZNF444Q8N0Y2 327 aaPredicted RBP19.62■□□□□ 0.73
APOBEC3F-203ENST00000476513 LRFN3Q9BTN0 628 aa19.62■□□□□ 0.73
APOBEC3F-203ENST00000476513 CERS4Q9HA82 394 aa19.62■□□□□ 0.73
APOBEC3F-203ENST00000476513 EPB41L4AQ9HCS5 686 aaPredicted RBP19.62■□□□□ 0.73
APOBEC3F-203ENST00000476513 Q9Y3F1 56 aa19.62■□□□□ 0.73
APOBEC3F-203ENST00000476513 EPOPA6NHQ4 379 aa19.61■□□□□ 0.73
APOBEC3F-203ENST00000476513 TKFCQ3LXA3 575 aa19.61■□□□□ 0.73
APOBEC3F-203ENST00000476513 EEPD1Q7L9B9 569 aa19.61■□□□□ 0.73
APOBEC3F-203ENST00000476513 FBXO16Q8IX29 292 aaPredicted RBP19.61■□□□□ 0.73
APOBEC3F-203ENST00000476513 OSBP2Q969R2 916 aa19.61■□□□□ 0.73
APOBEC3F-203ENST00000476513 TRERF1Q96PN7 1200 aa19.61■□□□□ 0.73
APOBEC3F-203ENST00000476513 ARIH1Q9Y4X5 557 aaPredicted RBP19.61■□□□□ 0.73
APOBEC3F-203ENST00000476513 CYP2C9P11712 490 aa19.6■□□□□ 0.73
APOBEC3F-203ENST00000476513 STAT2P52630 851 aa19.6■□□□□ 0.73
APOBEC3F-203ENST00000476513 KRT40Q6A162 431 aa19.6■□□□□ 0.73
APOBEC3F-203ENST00000476513 DEFB128Q7Z7B8 93 aa19.6■□□□□ 0.73
APOBEC3F-203ENST00000476513 ZNF287Q9HBT7 754 aa19.6■□□□□ 0.73
APOBEC3F-203ENST00000476513 TRMT13Q9NUP7 481 aaKnown RBP19.6■□□□□ 0.73
APOBEC3F-203ENST00000476513 ISY1Q9ULR0 285 aaKnown RBP19.6■□□□□ 0.73
APOBEC3F-203ENST00000476513 COG5Q9UP83 839 aa19.6■□□□□ 0.73
APOBEC3F-203ENST00000476513 TLL1O43897 1013 aa19.59■□□□□ 0.73
APOBEC3F-203ENST00000476513 SUPT20HL2P0C7V6 817 aa19.59■□□□□ 0.73
APOBEC3F-203ENST00000476513 ALAS1P13196 640 aa19.59■□□□□ 0.73
APOBEC3F-203ENST00000476513 FAM160B2Q86V87 743 aa19.59■□□□□ 0.73
APOBEC3F-203ENST00000476513 CHURC1Q8WUH1 139 aa19.59■□□□□ 0.73
APOBEC3F-203ENST00000476513 STAG1Q8WVM7 1258 aa19.59■□□□□ 0.73
APOBEC3F-203ENST00000476513 ZBTB40Q9NUA8 1239 aa19.59■□□□□ 0.73
APOBEC3F-203ENST00000476513 CYP39A1Q9NYL5 469 aa19.59■□□□□ 0.73
APOBEC3F-203ENST00000476513 HCN4Q9Y3Q4 1203 aa19.59■□□□□ 0.73
APOBEC3F-203ENST00000476513 MYH7P12883 1935 aa19.59■□□□□ 0.73
APOBEC3F-203ENST00000476513 TNKSO95271 1327 aa19.58■□□□□ 0.73
APOBEC3F-203ENST00000476513 TDO2P48775 406 aa19.58■□□□□ 0.72
APOBEC3F-203ENST00000476513 IKQ13123 557 aaPredicted RBP19.58■□□□□ 0.72
APOBEC3F-203ENST00000476513 MUM1L1Q5H9M0 696 aa19.58■□□□□ 0.72
APOBEC3F-203ENST00000476513 KIAA1211Q6ZU35 1233 aa19.58■□□□□ 0.72
APOBEC3F-203ENST00000476513 NEDD1Q8NHV4 660 aa19.58■□□□□ 0.72
APOBEC3F-203ENST00000476513 APPBP2Q92624 585 aa19.58■□□□□ 0.72
APOBEC3F-203ENST00000476513 CHMP4CQ96CF2 233 aa19.58■□□□□ 0.72
APOBEC3F-203ENST00000476513 GMCL1Q96IK5 515 aa19.58■□□□□ 0.72
APOBEC3F-203ENST00000476513 LRRC37A2A6NM11 1700 aa19.58■□□□□ 0.72
APOBEC3F-203ENST00000476513 PLIN4Q96Q06 1357 aa19.57■□□□□ 0.72
APOBEC3F-203ENST00000476513 MYH4Q9Y623 1939 aa19.57■□□□□ 0.72
APOBEC3F-203ENST00000476513 ARHGEF15O94989 841 aa19.57■□□□□ 0.72
APOBEC3F-203ENST00000476513 SNAP25P60880 206 aa19.57■□□□□ 0.72
APOBEC3F-203ENST00000476513 TMEM31Q5JXX7 168 aa19.57■□□□□ 0.72
APOBEC3F-203ENST00000476513 MORC4Q8TE76 937 aa19.57■□□□□ 0.72
APOBEC3F-203ENST00000476513 ARNTL2Q8WYA1 636 aa19.57■□□□□ 0.72
APOBEC3F-203ENST00000476513 VTA1Q9NP79 307 aa19.57■□□□□ 0.72
APOBEC3F-203ENST00000476513 GPAA1O43292 621 aa19.56■□□□□ 0.72
APOBEC3F-203ENST00000476513 TSPY3P0CV98 308 aa19.56■□□□□ 0.72
APOBEC3F-203ENST00000476513 TSPY8P0CW00 308 aa19.56■□□□□ 0.72
APOBEC3F-203ENST00000476513 ACTN1P12814 892 aa19.56■□□□□ 0.72
APOBEC3F-203ENST00000476513 MCCP23508 829 aa19.56■□□□□ 0.72
APOBEC3F-203ENST00000476513 SLC1A4P43007 532 aa19.56■□□□□ 0.72
APOBEC3F-203ENST00000476513 PURAQ00577 322 aaKnown RBP19.56■□□□□ 0.72
APOBEC3F-203ENST00000476513 TAP1Q03518 808 aa19.56■□□□□ 0.72
APOBEC3F-203ENST00000476513 DUSP28Q4G0W2 176 aa19.56■□□□□ 0.72
APOBEC3F-203ENST00000476513 KBTBD3Q8NAB2 608 aa19.56■□□□□ 0.72
APOBEC3F-203ENST00000476513 PHOSPHO2Q8TCD6 241 aa19.56■□□□□ 0.72
APOBEC3F-203ENST00000476513 HLA-CQ95604 372 aa19.56■□□□□ 0.72
APOBEC3F-203ENST00000476513 PURBQ96QR8 312 aaKnown RBP19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms