RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 CCDC88AQ3V6T2 1871 aa7.79□□□□□ -1.16
UBR4-212ENST00000475973 ANKRD18BA2A2Z9 1011 aa7.79□□□□□ -1.16
UBR4-212ENST00000475973 CCDC151A5D8V7 595 aa7.79□□□□□ -1.16
UBR4-212ENST00000475973 SPDYE5A6NIY4 337 aa7.79□□□□□ -1.16
UBR4-212ENST00000475973 BTBD18B2RXH4 712 aa7.79□□□□□ -1.16
UBR4-212ENST00000475973 B4E1Z4 1266 aa7.79□□□□□ -1.16
UBR4-212ENST00000475973 BIN1O00499 593 aa7.79□□□□□ -1.16
UBR4-212ENST00000475973 IGSF3O75054 1194 aa7.79□□□□□ -1.16
UBR4-212ENST00000475973 SASH3O75995 380 aa7.79□□□□□ -1.16
UBR4-212ENST00000475973 VIL1P09327 827 aaKnown RBP7.79□□□□□ -1.16
UBR4-212ENST00000475973 TOP1P11387 765 aaKnown RBP7.79□□□□□ -1.16
UBR4-212ENST00000475973 PCP11498 1178 aaKnown RBP7.79□□□□□ -1.16
UBR4-212ENST00000475973 GUCY1A2P33402 732 aa7.79□□□□□ -1.16
UBR4-212ENST00000475973 GJA5P36382 358 aa7.79□□□□□ -1.16
UBR4-212ENST00000475973 PHKA1P46020 1223 aa7.79□□□□□ -1.16
UBR4-212ENST00000475973 GRIN1Q05586 938 aa7.79□□□□□ -1.16
UBR4-212ENST00000475973 DPYDQ12882 1025 aa7.79□□□□□ -1.16
UBR4-212ENST00000475973 PUM3Q15397 648 aaKnown RBP7.79□□□□□ -1.16
UBR4-212ENST00000475973 PROX2Q3B8N5 592 aa7.79□□□□□ -1.16
UBR4-212ENST00000475973 TMEM259Q4ZIN3 620 aa7.79□□□□□ -1.16
UBR4-212ENST00000475973 ARHGAP29Q52LW3 1261 aa7.79□□□□□ -1.16
UBR4-212ENST00000475973 SPATA1Q5VX52 437 aa7.79□□□□□ -1.16
UBR4-212ENST00000475973 JAKMIP3Q5VZ66 844 aa7.79□□□□□ -1.16
UBR4-212ENST00000475973 CST9Q5W186 159 aa7.79□□□□□ -1.16
UBR4-212ENST00000475973 CYP4F22Q6NT55 531 aa7.79□□□□□ -1.16
UBR4-212ENST00000475973 RSBN1LQ6PCB5 846 aaPredicted RBP7.79□□□□□ -1.16
UBR4-212ENST00000475973 LDHAL6AQ6ZMR3 332 aa7.79□□□□□ -1.16
UBR4-212ENST00000475973 SAMD7Q7Z3H4 446 aa7.79□□□□□ -1.16
UBR4-212ENST00000475973 DIS3L2Q8IYB7 885 aaKnown RBP7.79□□□□□ -1.16
UBR4-212ENST00000475973 CNNM3Q8NE01 707 aa7.79□□□□□ -1.16
UBR4-212ENST00000475973 AGBL3Q8NEM8 1001 aa7.79□□□□□ -1.16
UBR4-212ENST00000475973 ZNF592Q92610 1267 aa7.79□□□□□ -1.16
UBR4-212ENST00000475973 PHKBQ93100 1093 aa7.79□□□□□ -1.16
UBR4-212ENST00000475973 GSDMAQ96QA5 445 aa7.79□□□□□ -1.16
UBR4-212ENST00000475973 WDR24Q96S15 920 aa7.79□□□□□ -1.16
UBR4-212ENST00000475973 KCNK17Q96T54 332 aa7.79□□□□□ -1.16
UBR4-212ENST00000475973 BAG1Q99933 345 aaPredicted RBP7.79□□□□□ -1.16
UBR4-212ENST00000475973 PHF20Q9BVI0 1012 aa7.79□□□□□ -1.16
UBR4-212ENST00000475973 ANKRD2Q9GZV1 360 aa7.79□□□□□ -1.16
UBR4-212ENST00000475973 WBP1LQ9NX94 342 aa7.79□□□□□ -1.16
UBR4-212ENST00000475973 GGA3Q9NZ52 723 aa7.79□□□□□ -1.16
UBR4-212ENST00000475973 LIMA1Q9UHB6 759 aaKnown RBP7.79□□□□□ -1.16
UBR4-212ENST00000475973 DACH1Q9UI36 760 aa7.79□□□□□ -1.16
UBR4-212ENST00000475973 HOOK1Q9UJC3 728 aaKnown RBP7.79□□□□□ -1.16
UBR4-212ENST00000475973 LEMD3Q9Y2U8 911 aa7.79□□□□□ -1.16
UBR4-212ENST00000475973 V9GYY5 206 aaPredicted RBP7.79□□□□□ -1.16
UBR4-212ENST00000475973 MYO5AQ9Y4I1 1855 aaKnown RBP7.79□□□□□ -1.16
UBR4-212ENST00000475973 CCDC196A0A1B0GTZ2 297 aa7.78□□□□□ -1.16
UBR4-212ENST00000475973 SHTN1A0MZ66 631 aa7.78□□□□□ -1.16
UBR4-212ENST00000475973 USP17L3A6NCW0 530 aa7.78□□□□□ -1.16
UBR4-212ENST00000475973 USP17L4A6NCW7 530 aa7.78□□□□□ -1.16
UBR4-212ENST00000475973 GOLGA8AA7E2F4 631 aa7.78□□□□□ -1.16
UBR4-212ENST00000475973 PRPF3O43395 683 aaKnown RBP7.78□□□□□ -1.16
UBR4-212ENST00000475973 CA12O43570 354 aa7.78□□□□□ -1.16
UBR4-212ENST00000475973 RPS6KA5O75582 802 aa7.78□□□□□ -1.16
UBR4-212ENST00000475973 BMP15O95972 392 aa7.78□□□□□ -1.16
UBR4-212ENST00000475973 MAP2K2P36507 400 aa7.78□□□□□ -1.16
UBR4-212ENST00000475973 HIRAP54198 1017 aaPredicted RBP7.78□□□□□ -1.16
UBR4-212ENST00000475973 HUNKP57058 714 aa7.78□□□□□ -1.16
UBR4-212ENST00000475973 SSRP1Q08945 709 aaKnown RBP7.78□□□□□ -1.16
UBR4-212ENST00000475973 BRD3Q15059 726 aa7.78□□□□□ -1.16
UBR4-212ENST00000475973 TAF7LQ5H9L4 462 aa7.78□□□□□ -1.16
UBR4-212ENST00000475973 METTL24Q5JXM2 366 aa7.78□□□□□ -1.16
UBR4-212ENST00000475973 USP17L1Q7RTZ2 530 aa7.78□□□□□ -1.16
UBR4-212ENST00000475973 SAPCD2Q86UD0 394 aa7.78□□□□□ -1.16
UBR4-212ENST00000475973 OGFOD1Q8N543 542 aa7.78□□□□□ -1.16
UBR4-212ENST00000475973 UBXN4Q92575 508 aa7.78□□□□□ -1.16
UBR4-212ENST00000475973 ZBED2Q9BTP6 218 aa7.78□□□□□ -1.16
UBR4-212ENST00000475973 CARD6Q9BX69 1037 aa7.78□□□□□ -1.16
UBR4-212ENST00000475973 COA1Q9GZY4 146 aa7.78□□□□□ -1.16
UBR4-212ENST00000475973 RAI14Q9P0K7 980 aa7.78□□□□□ -1.16
UBR4-212ENST00000475973 SERTAD1Q9UHV2 236 aa7.78□□□□□ -1.16
UBR4-212ENST00000475973 MINPP1Q9UNW1 487 aa7.78□□□□□ -1.16
UBR4-212ENST00000475973 NFE2L3Q9Y4A8 694 aa7.78□□□□□ -1.16
UBR4-212ENST00000475973 PDS5AQ29RF7 1337 aaKnown RBP7.78□□□□□ -1.16
UBR4-212ENST00000475973 A0A087X0B3 334 aa7.77□□□□□ -1.17
UBR4-212ENST00000475973 CCDC66A2RUB6 948 aa7.77□□□□□ -1.17
UBR4-212ENST00000475973 UBE2Q2LH0YL09 131 aa7.77□□□□□ -1.17
UBR4-212ENST00000475973 SMAPO00193 183 aa7.77□□□□□ -1.17
UBR4-212ENST00000475973 PPFIA3O75145 1194 aa7.77□□□□□ -1.17
UBR4-212ENST00000475973 TUBBP07437 444 aa7.77□□□□□ -1.17
UBR4-212ENST00000475973 USP17L8P0C7I0 530 aa7.77□□□□□ -1.17
UBR4-212ENST00000475973 HSPA8P11142 646 aaKnown RBP7.77□□□□□ -1.17
UBR4-212ENST00000475973 SLC5A1P13866 664 aa7.77□□□□□ -1.17
UBR4-212ENST00000475973 ARHGAP25P42331 645 aa7.77□□□□□ -1.17
UBR4-212ENST00000475973 MMP14P50281 582 aa7.77□□□□□ -1.17
UBR4-212ENST00000475973 LBX1P52954 281 aa7.77□□□□□ -1.17
UBR4-212ENST00000475973 ZNF280AP59817 542 aaPredicted RBP7.77□□□□□ -1.17
UBR4-212ENST00000475973 AMPD2Q01433 879 aa7.77□□□□□ -1.17
UBR4-212ENST00000475973 NOGQ13253 232 aa7.77□□□□□ -1.17
UBR4-212ENST00000475973 RASGRF1Q13972 1273 aa7.77□□□□□ -1.17
UBR4-212ENST00000475973 ZRSR1Q15695 479 aaKnown RBP7.77□□□□□ -1.17
UBR4-212ENST00000475973 CFAP100Q494V2 611 aa7.77□□□□□ -1.17
UBR4-212ENST00000475973 TMEM67Q5HYA8 995 aa7.77□□□□□ -1.17
UBR4-212ENST00000475973 BEND6Q5SZJ8 279 aaPredicted RBP7.77□□□□□ -1.17
UBR4-212ENST00000475973 GORABQ5T7V8 394 aa7.77□□□□□ -1.17
UBR4-212ENST00000475973 RAD9BQ6WBX8 426 aa7.77□□□□□ -1.17
UBR4-212ENST00000475973 SRGAP1Q7Z6B7 1085 aa7.77□□□□□ -1.17
UBR4-212ENST00000475973 FAM177A1Q8N128 213 aaPredicted RBP7.77□□□□□ -1.17
UBR4-212ENST00000475973 C4orf32Q8N8J7 132 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms