RNA–Protein interactions for RNA: ENST00000475944.1

CDRT1-205, CMT1A duplicated region transcript 1, humanhuman

TSL 3

Gene CDRT1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-205ENST00000475944 CHMP4CQ96CF2 233 aa12.82□□□□□ -0.36
CDRT1-205ENST00000475944 SEZ6LQ9BYH1 1024 aa12.82□□□□□ -0.36
CDRT1-205ENST00000475944 MTIF3Q9H2K0 278 aaKnown RBP12.82□□□□□ -0.36
CDRT1-205ENST00000475944 IL17RBQ9NRM6 502 aa12.82□□□□□ -0.36
CDRT1-205ENST00000475944 CYP39A1Q9NYL5 469 aa12.82□□□□□ -0.36
CDRT1-205ENST00000475944 CCPG1Q9ULG6 757 aa12.82□□□□□ -0.36
CDRT1-205ENST00000475944 PRR12Q9ULL5 1215 aa12.82□□□□□ -0.36
CDRT1-205ENST00000475944 GNEQ9Y223 722 aaKnown RBP12.82□□□□□ -0.36
CDRT1-205ENST00000475944 PCDHB15Q9Y5E8 787 aa12.82□□□□□ -0.36
CDRT1-205ENST00000475944 ASTN1O14525 1302 aa12.82□□□□□ -0.36
CDRT1-205ENST00000475944 LRRC37A2A6NM11 1700 aa12.82□□□□□ -0.36
CDRT1-205ENST00000475944 CUL9Q8IWT3 2517 aa12.81□□□□□ -0.36
CDRT1-205ENST00000475944 ICAM1P05362 532 aa12.81□□□□□ -0.36
CDRT1-205ENST00000475944 ITGA7Q13683 1181 aa12.81□□□□□ -0.36
CDRT1-205ENST00000475944 FSCN1Q16658 493 aaKnown RBP12.81□□□□□ -0.36
CDRT1-205ENST00000475944 CCDC96Q2M329 555 aa12.81□□□□□ -0.36
CDRT1-205ENST00000475944 MUM1L1Q5H9M0 696 aa12.81□□□□□ -0.36
CDRT1-205ENST00000475944 RASIP1Q5U651 963 aa12.81□□□□□ -0.36
CDRT1-205ENST00000475944 IQSEC1Q6DN90 963 aa12.81□□□□□ -0.36
CDRT1-205ENST00000475944 NSMFQ6X4W1 530 aa12.81□□□□□ -0.36
CDRT1-205ENST00000475944 ZNF365Q70YC5 407 aa12.81□□□□□ -0.36
CDRT1-205ENST00000475944 C16orf59Q7L2K0 433 aa12.81□□□□□ -0.36
CDRT1-205ENST00000475944 SLC43A3Q8NBI5 491 aa12.81□□□□□ -0.36
CDRT1-205ENST00000475944 DCAF4Q8WV16 495 aa12.81□□□□□ -0.36
CDRT1-205ENST00000475944 GAS2L1Q99501 681 aaPredicted RBP12.81□□□□□ -0.36
CDRT1-205ENST00000475944 HIPK3Q9H422 1215 aa12.81□□□□□ -0.36
CDRT1-205ENST00000475944 IL23AQ9NPF7 189 aa12.81□□□□□ -0.36
CDRT1-205ENST00000475944 ANAPC4Q9UJX5 808 aa12.81□□□□□ -0.36
CDRT1-205ENST00000475944 MTMR7Q9Y216 660 aa12.81□□□□□ -0.36
CDRT1-205ENST00000475944 Q9Y3F1 56 aa12.81□□□□□ -0.36
CDRT1-205ENST00000475944 FOXP2O15409 715 aa12.8□□□□□ -0.36
CDRT1-205ENST00000475944 DYNC1LI2O43237 492 aaPredicted RBP12.8□□□□□ -0.36
CDRT1-205ENST00000475944 ORC4O43929 436 aa12.8□□□□□ -0.36
CDRT1-205ENST00000475944 RANBP6O60518 1105 aaKnown RBP12.8□□□□□ -0.36
CDRT1-205ENST00000475944 NMT2O60551 498 aa12.8□□□□□ -0.36
CDRT1-205ENST00000475944 ACRP10323 421 aa12.8□□□□□ -0.36
CDRT1-205ENST00000475944 SMPD1P17405 629 aa12.8□□□□□ -0.36
CDRT1-205ENST00000475944 CYP2C18P33260 490 aa12.8□□□□□ -0.36
CDRT1-205ENST00000475944 SNAP25P60880 206 aa12.8□□□□□ -0.36
CDRT1-205ENST00000475944 FBXO16Q8IX29 292 aaPredicted RBP12.8□□□□□ -0.36
CDRT1-205ENST00000475944 EVI5LQ96CN4 794 aa12.8□□□□□ -0.36
CDRT1-205ENST00000475944 PBX4Q9BYU1 374 aa12.8□□□□□ -0.36
CDRT1-205ENST00000475944 VTA1Q9NP79 307 aa12.8□□□□□ -0.36
CDRT1-205ENST00000475944 ADD3Q9UEY8 706 aaKnown RBP12.8□□□□□ -0.36
CDRT1-205ENST00000475944 EYSQ5T1H1 3165 aa12.79□□□□□ -0.36
CDRT1-205ENST00000475944 LOC102724159A0A0B4J2E5 919 aa12.79□□□□□ -0.36
CDRT1-205ENST00000475944 GRXCR1A8MXD5 290 aa12.79□□□□□ -0.36
CDRT1-205ENST00000475944 PBX2P40425 430 aa12.79□□□□□ -0.36
CDRT1-205ENST00000475944 NOVP48745 357 aa12.79□□□□□ -0.36
CDRT1-205ENST00000475944 PWP2Q15269 919 aaKnown RBP12.79□□□□□ -0.36
CDRT1-205ENST00000475944 RAB30Q15771 203 aa12.79□□□□□ -0.36
CDRT1-205ENST00000475944 TAPT1Q6NXT6 567 aa12.79□□□□□ -0.36
CDRT1-205ENST00000475944 KIAA1211Q6ZU35 1233 aa12.79□□□□□ -0.36
CDRT1-205ENST00000475944 EEPD1Q7L9B9 569 aa12.79□□□□□ -0.36
CDRT1-205ENST00000475944 MORC4Q8TE76 937 aa12.79□□□□□ -0.36
CDRT1-205ENST00000475944 HERVK_113Q902F9 699 aa12.79□□□□□ -0.36
CDRT1-205ENST00000475944 RANBP17Q9H2T7 1088 aaKnown RBP12.79□□□□□ -0.36
CDRT1-205ENST00000475944 INCENPQ9NQS7 918 aa12.79□□□□□ -0.36
CDRT1-205ENST00000475944 PDGFCQ9NRA1 345 aa12.79□□□□□ -0.36
CDRT1-205ENST00000475944 HELLSQ9NRZ9 838 aa12.79□□□□□ -0.36
CDRT1-205ENST00000475944 TOMM22Q9NS69 142 aa12.79□□□□□ -0.36
CDRT1-205ENST00000475944 MSRAQ9UJ68 235 aa12.79□□□□□ -0.36
CDRT1-205ENST00000475944 SALL3Q9BXA9 1300 aa12.79□□□□□ -0.36
CDRT1-205ENST00000475944 FGBP02675 491 aa12.78□□□□□ -0.36
CDRT1-205ENST00000475944 FGRP09769 529 aa12.78□□□□□ -0.36
CDRT1-205ENST00000475944 TOP1P11387 765 aaKnown RBP12.78□□□□□ -0.36
CDRT1-205ENST00000475944 ALX1Q15699 326 aa12.78□□□□□ -0.36
CDRT1-205ENST00000475944 ANKRD45Q5TZF3 282 aa12.78□□□□□ -0.36
CDRT1-205ENST00000475944 VPS53Q5VIR6 699 aa12.78□□□□□ -0.36
CDRT1-205ENST00000475944 SYDE2Q5VT97 1194 aa12.78□□□□□ -0.36
CDRT1-205ENST00000475944 BTNL9Q6UXG8 535 aa12.78□□□□□ -0.36
CDRT1-205ENST00000475944 RASGRP2Q7LDG7 609 aa12.78□□□□□ -0.36
CDRT1-205ENST00000475944 PNMA2Q9UL42 364 aa12.78□□□□□ -0.36
CDRT1-205ENST00000475944 CDH23Q9H251 3354 aa12.78□□□□□ -0.36
CDRT1-205ENST00000475944 B4GALT4O60513 344 aa12.77□□□□□ -0.37
CDRT1-205ENST00000475944 SLC16A2P36021 539 aa12.77□□□□□ -0.37
CDRT1-205ENST00000475944 ALDH5A1P51649 535 aaPredicted RBP12.77□□□□□ -0.37
CDRT1-205ENST00000475944 BAATQ14032 418 aaPredicted RBP12.77□□□□□ -0.37
CDRT1-205ENST00000475944 DUSP28Q4G0W2 176 aa12.77□□□□□ -0.37
CDRT1-205ENST00000475944 TJAP1Q5JTD0 557 aa12.77□□□□□ -0.37
CDRT1-205ENST00000475944 RRP12Q5JTH9 1297 aaKnown RBP12.77□□□□□ -0.37
CDRT1-205ENST00000475944 TTBK2Q6IQ55 1244 aa12.77□□□□□ -0.37
CDRT1-205ENST00000475944 RPUSD2Q8IZ73 545 aaKnown RBP12.77□□□□□ -0.37
CDRT1-205ENST00000475944 USP38Q8NB14 1042 aa12.77□□□□□ -0.37
CDRT1-205ENST00000475944 NOC4LQ9BVI4 516 aaKnown RBP12.77□□□□□ -0.37
CDRT1-205ENST00000475944 PRDM12Q9H4Q4 367 aa12.77□□□□□ -0.37
CDRT1-205ENST00000475944 TCP11L1Q9NUJ3 509 aa12.77□□□□□ -0.37
CDRT1-205ENST00000475944 POLR3EQ9NVU0 708 aa12.77□□□□□ -0.37
CDRT1-205ENST00000475944 DDX49Q9Y6V7 483 aaKnown RBP12.77□□□□□ -0.37
CDRT1-205ENST00000475944 GRIN2DO15399 1336 aa12.77□□□□□ -0.37
CDRT1-205ENST00000475944 UMODL1Q5DID0 1318 aa12.77□□□□□ -0.37
CDRT1-205ENST00000475944 LCTP09848 1927 aa12.76□□□□□ -0.37
CDRT1-205ENST00000475944 PTPDC1A2A3K4 754 aa12.76□□□□□ -0.37
CDRT1-205ENST00000475944 NFIBO00712 420 aa12.76□□□□□ -0.37
CDRT1-205ENST00000475944 FGAP02671 866 aa12.76□□□□□ -0.37
CDRT1-205ENST00000475944 SUPT20HL2P0C7V6 817 aa12.76□□□□□ -0.37
CDRT1-205ENST00000475944 PTGS1P23219 599 aa12.76□□□□□ -0.37
CDRT1-205ENST00000475944 CPT1AP50416 773 aa12.76□□□□□ -0.37
CDRT1-205ENST00000475944 PDE1AP54750 535 aa12.76□□□□□ -0.37
CDRT1-205ENST00000475944 CCL23P55773 120 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 1819.7 ms