RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 TRIM59Q8IWR1 403 aa10.03□□□□□ -0.8
SMC5-203ENST00000475540 PLCD4Q9BRC7 762 aa10.03□□□□□ -0.8
SMC5-203ENST00000475540 EPN3Q9H201 632 aa10.03□□□□□ -0.8
SMC5-203ENST00000475540 DCP1AQ9NPI6 582 aaPredicted RBP10.03□□□□□ -0.8
SMC5-203ENST00000475540 PNLIPP16233 465 aa10.02□□□□□ -0.81
SMC5-203ENST00000475540 PRKCAP17252 672 aa10.02□□□□□ -0.81
SMC5-203ENST00000475540 ARL4AP40617 200 aa10.02□□□□□ -0.81
SMC5-203ENST00000475540 CEBPAP49715 358 aaPredicted RBP10.02□□□□□ -0.81
SMC5-203ENST00000475540 IRF2BP1Q8IU81 584 aa10.02□□□□□ -0.81
SMC5-203ENST00000475540 FAM84AQ96KN4 292 aa10.02□□□□□ -0.81
SMC5-203ENST00000475540 MRGPRX3Q96LB0 322 aa10.02□□□□□ -0.81
SMC5-203ENST00000475540 JMJD8Q96S16 334 aa10.02□□□□□ -0.81
SMC5-203ENST00000475540 HIRIP3Q9BW71 556 aaPredicted RBP10.02□□□□□ -0.81
SMC5-203ENST00000475540 AGRPO00253 132 aa10.01□□□□□ -0.81
SMC5-203ENST00000475540 ITGAVP06756 1048 aa10.01□□□□□ -0.81
SMC5-203ENST00000475540 CYP4F8P98187 520 aa10.01□□□□□ -0.81
SMC5-203ENST00000475540 LAPTM5Q13571 262 aa10.01□□□□□ -0.81
SMC5-203ENST00000475540 GTF2IRD2BQ6EKJ0 949 aa10.01□□□□□ -0.81
SMC5-203ENST00000475540 GTF2IRD2Q86UP8 949 aa10.01□□□□□ -0.81
SMC5-203ENST00000475540 NUP43Q8NFH3 380 aa10.01□□□□□ -0.81
SMC5-203ENST00000475540 ARMC5Q96C12 935 aa10.01□□□□□ -0.81
SMC5-203ENST00000475540 SLC38A3Q99624 504 aa10.01□□□□□ -0.81
SMC5-203ENST00000475540 EPB41L4BQ9H329 900 aa10.01□□□□□ -0.81
SMC5-203ENST00000475540 CYP26B1Q9NR63 512 aa10.01□□□□□ -0.81
SMC5-203ENST00000475540 ACSL6Q9UKU0 697 aa10.01□□□□□ -0.81
SMC5-203ENST00000475540 BTBD11A6QL63 1104 aa10□□□□□ -0.81
SMC5-203ENST00000475540 EFEMP2O95967 443 aa10□□□□□ -0.81
SMC5-203ENST00000475540 PAMP19021 973 aa10□□□□□ -0.81
SMC5-203ENST00000475540 SF3A1Q15459 793 aaKnown RBP10□□□□□ -0.81
SMC5-203ENST00000475540 ADGRF1Q5T601 910 aa10□□□□□ -0.81
SMC5-203ENST00000475540 FBXO15Q8NCQ5 510 aaPredicted RBP10□□□□□ -0.81
SMC5-203ENST00000475540 LGR4Q9BXB1 951 aa10□□□□□ -0.81
SMC5-203ENST00000475540 IMPACTQ9P2X3 320 aa10□□□□□ -0.81
SMC5-203ENST00000475540 TRBV23OR9-2A0A075B6M9 112 aa9.99□□□□□ -0.81
SMC5-203ENST00000475540 OR14I1A6ND48 311 aa9.99□□□□□ -0.81
SMC5-203ENST00000475540 L1CAMP32004 1257 aa9.99□□□□□ -0.81
SMC5-203ENST00000475540 SCRN1Q12765 414 aa9.99□□□□□ -0.81
SMC5-203ENST00000475540 KIR3DS1Q14943 382 aa9.99□□□□□ -0.81
SMC5-203ENST00000475540 NBPF6Q5VWK0 638 aa9.99□□□□□ -0.81
SMC5-203ENST00000475540 NBPF4Q96M43 638 aa9.99□□□□□ -0.81
SMC5-203ENST00000475540 KRTAP9-9Q9BYP9 154 aa9.99□□□□□ -0.81
SMC5-203ENST00000475540 KRTAP9-4Q9BYQ2 154 aa9.99□□□□□ -0.81
SMC5-203ENST00000475540 A0A1W2PQJ5 194 aa9.98□□□□□ -0.81
SMC5-203ENST00000475540 MESP2Q0VG99 397 aa9.98□□□□□ -0.81
SMC5-203ENST00000475540 ZNF648Q5T619 568 aaPredicted RBP9.98□□□□□ -0.81
SMC5-203ENST00000475540 ZNF227Q86WZ6 799 aa9.98□□□□□ -0.81
SMC5-203ENST00000475540 COPS5Q92905 334 aa9.98□□□□□ -0.81
SMC5-203ENST00000475540 NKX2-4Q9H2Z4 354 aa9.98□□□□□ -0.81
SMC5-203ENST00000475540 NPHP3-ACAD11A0A0J9YXS1 232 aa9.97□□□□□ -0.81
SMC5-203ENST00000475540 HOXC12P31275 282 aa9.97□□□□□ -0.81
SMC5-203ENST00000475540 SLC10A6Q3KNW5 377 aa9.97□□□□□ -0.81
SMC5-203ENST00000475540 BTN2A2Q8WVV5 523 aa9.97□□□□□ -0.81
SMC5-203ENST00000475540 CCDC140Q96MF4 163 aa9.97□□□□□ -0.81
SMC5-203ENST00000475540 ZNF552Q9H707 407 aaPredicted RBP9.97□□□□□ -0.81
SMC5-203ENST00000475540 GPRC5CQ9NQ84 441 aa9.97□□□□□ -0.81
SMC5-203ENST00000475540 MPOP05164 745 aa9.96□□□□□ -0.82
SMC5-203ENST00000475540 MVKQ03426 396 aa9.96□□□□□ -0.82
SMC5-203ENST00000475540 RBL2Q08999 1139 aa9.96□□□□□ -0.82
SMC5-203ENST00000475540 ZNF605Q86T29 641 aa9.96□□□□□ -0.82
SMC5-203ENST00000475540 CPNE8Q86YQ8 564 aa9.96□□□□□ -0.82
SMC5-203ENST00000475540 NLGN2Q8NFZ4 835 aa9.96□□□□□ -0.82
SMC5-203ENST00000475540 IQCA1LA6NCM1 817 aa9.95□□□□□ -0.82
SMC5-203ENST00000475540 TBX1O43435 398 aa9.95□□□□□ -0.82
SMC5-203ENST00000475540 CORO7P57737 925 aa9.95□□□□□ -0.82
SMC5-203ENST00000475540 ERVFRD-1P60508 538 aa9.95□□□□□ -0.82
SMC5-203ENST00000475540 PKN1Q16512 942 aa9.95□□□□□ -0.82
SMC5-203ENST00000475540 SYDE1Q6ZW31 735 aaPredicted RBP9.95□□□□□ -0.82
SMC5-203ENST00000475540 ST13P5Q8NFI4 369 aaPredicted RBP9.95□□□□□ -0.82
SMC5-203ENST00000475540 SLC26A8Q96RN1 970 aa9.95□□□□□ -0.82
SMC5-203ENST00000475540 KCNK12Q9HB15 430 aa9.95□□□□□ -0.82
SMC5-203ENST00000475540 PDLIM7Q9NR12 457 aa9.95□□□□□ -0.82
SMC5-203ENST00000475540 CLEC1BQ9P126 229 aa9.95□□□□□ -0.82
SMC5-203ENST00000475540 SIRPGQ9P1W8 387 aa9.95□□□□□ -0.82
SMC5-203ENST00000475540 CPP00450 1065 aa9.94□□□□□ -0.82
SMC5-203ENST00000475540 SNRPB2P08579 225 aaKnown RBP9.94□□□□□ -0.82
SMC5-203ENST00000475540 PLS3P13797 630 aa9.94□□□□□ -0.82
SMC5-203ENST00000475540 SOGA3Q5TF21 947 aa9.94□□□□□ -0.82
SMC5-203ENST00000475540 TMEM132EQ6IEE7 984 aa9.94□□□□□ -0.82
SMC5-203ENST00000475540 KCNN1Q92952 543 aa9.94□□□□□ -0.82
SMC5-203ENST00000475540 PEX10O60683 326 aa9.93□□□□□ -0.82
SMC5-203ENST00000475540 THBDP07204 575 aa9.93□□□□□ -0.82
SMC5-203ENST00000475540 SDHBP21912 280 aa9.93□□□□□ -0.82
SMC5-203ENST00000475540 ECI1P42126 302 aa9.93□□□□□ -0.82
SMC5-203ENST00000475540 KCNJ6P48051 423 aa9.93□□□□□ -0.82
SMC5-203ENST00000475540 RBM10P98175 930 aaKnown RBP9.93□□□□□ -0.82
SMC5-203ENST00000475540 SGSM3Q96HU1 749 aa9.93□□□□□ -0.82
SMC5-203ENST00000475540 PPP1R16BQ96T49 567 aa9.93□□□□□ -0.82
SMC5-203ENST00000475540 MMP19Q99542 508 aa9.93□□□□□ -0.82
SMC5-203ENST00000475540 A0A1W2PQU0 124 aa9.92□□□□□ -0.82
SMC5-203ENST00000475540 ABLIM1O14639 778 aa9.92□□□□□ -0.82
SMC5-203ENST00000475540 NPHS1O60500 1241 aa9.92□□□□□ -0.82
SMC5-203ENST00000475540 C8AP07357 584 aa9.92□□□□□ -0.82
SMC5-203ENST00000475540 TMEM253P0C7T8 217 aa9.92□□□□□ -0.82
SMC5-203ENST00000475540 MSL3P1P0C860 447 aa9.92□□□□□ -0.82
SMC5-203ENST00000475540 PPP2R2AP63151 447 aa9.92□□□□□ -0.82
SMC5-203ENST00000475540 TMEM62Q0P6H9 643 aa9.92□□□□□ -0.82
SMC5-203ENST00000475540 IQCEQ6IPM2 695 aa9.92□□□□□ -0.82
SMC5-203ENST00000475540 BHLHE22Q8NFJ8 381 aaPredicted RBP9.92□□□□□ -0.82
SMC5-203ENST00000475540 SREK1Q8WXA9 508 aaKnown RBP9.92□□□□□ -0.82
SMC5-203ENST00000475540 CCDC113Q9H0I3 377 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms