RNA–Protein interactions for RNA: ENST00000475344.1

LTN1-204, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene LTN1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-204ENST00000475344 TCF3P15923 654 aa7.57□□□□□ -1.2
LTN1-204ENST00000475344 ATF4P18848 351 aaPredicted RBP7.57□□□□□ -1.2
LTN1-204ENST00000475344 RBM25P49756 843 aaKnown RBP7.57□□□□□ -1.2
LTN1-204ENST00000475344 OLFML2BQ68BL8 750 aa7.57□□□□□ -1.2
LTN1-204ENST00000475344 VPS37DQ86XT2 251 aa7.57□□□□□ -1.2
LTN1-204ENST00000475344 C1QL4Q86Z23 238 aa7.57□□□□□ -1.2
LTN1-204ENST00000475344 PTCHD1Q96NR3 888 aa7.57□□□□□ -1.2
LTN1-204ENST00000475344 IRF2BPLQ9H1B7 796 aa7.57□□□□□ -1.2
LTN1-204ENST00000475344 GCM1Q9NP62 436 aa7.57□□□□□ -1.2
LTN1-204ENST00000475344 ACSL6Q9UKU0 697 aa7.57□□□□□ -1.2
LTN1-204ENST00000475344 CNOT6Q9ULM6 557 aaKnown RBP7.57□□□□□ -1.2
LTN1-204ENST00000475344 MSL3P1P0C860 447 aa7.56□□□□□ -1.2
LTN1-204ENST00000475344 CASP7P55210 303 aa7.56□□□□□ -1.2
LTN1-204ENST00000475344 ERVFRD-1P60508 538 aa7.56□□□□□ -1.2
LTN1-204ENST00000475344 SPOCD1Q6ZMY3 1216 aa7.56□□□□□ -1.2
LTN1-204ENST00000475344 TMC6Q7Z403 805 aa7.56□□□□□ -1.2
LTN1-204ENST00000475344 MCMBPQ9BTE3 642 aa7.56□□□□□ -1.2
LTN1-204ENST00000475344 CGGBP1Q9UFW8 167 aaPredicted RBP7.56□□□□□ -1.2
LTN1-204ENST00000475344 MBD1Q9UIS9 605 aaPredicted RBP7.56□□□□□ -1.2
LTN1-204ENST00000475344 TACR1P25103 407 aa7.55□□□□□ -1.2
LTN1-204ENST00000475344 AMPD2Q01433 879 aa7.55□□□□□ -1.2
LTN1-204ENST00000475344 MVKQ03426 396 aa7.55□□□□□ -1.2
LTN1-204ENST00000475344 BICRALQ6AI39 1079 aa7.55□□□□□ -1.2
LTN1-204ENST00000475344 LCNL1Q6ZST4 164 aa7.55□□□□□ -1.2
LTN1-204ENST00000475344 TNFRSF12AQ9NP84 129 aa7.55□□□□□ -1.2
LTN1-204ENST00000475344 KLHL14Q9P2G3 628 aa7.55□□□□□ -1.2
LTN1-204ENST00000475344 ANKRD34BA5PLL1 514 aa7.54□□□□□ -1.2
LTN1-204ENST00000475344 ABLIM1O14639 778 aa7.54□□□□□ -1.2
LTN1-204ENST00000475344 AURKAO14965 403 aa7.54□□□□□ -1.2
LTN1-204ENST00000475344 SMAD7O15105 426 aaKnown RBP7.54□□□□□ -1.2
LTN1-204ENST00000475344 SEPHS1P49903 392 aa7.54□□□□□ -1.2
LTN1-204ENST00000475344 EPHB3P54753 998 aa7.54□□□□□ -1.2
LTN1-204ENST00000475344 GNL2Q13823 731 aaKnown RBP7.54□□□□□ -1.2
LTN1-204ENST00000475344 LARP1BQ659C4 914 aaKnown RBP7.54□□□□□ -1.2
LTN1-204ENST00000475344 APEX2Q9UBZ4 518 aa7.54□□□□□ -1.2
LTN1-204ENST00000475344 AKT3Q9Y243 479 aa7.54□□□□□ -1.2
LTN1-204ENST00000475344 KCTD3Q9Y597 815 aa7.54□□□□□ -1.2
LTN1-204ENST00000475344 C2orf71A6NGG8 1288 aa7.53□□□□□ -1.2
LTN1-204ENST00000475344 KCNH1O95259 989 aa7.53□□□□□ -1.2
LTN1-204ENST00000475344 L1CAMP32004 1257 aa7.53□□□□□ -1.2
LTN1-204ENST00000475344 YBX1P67809 324 aaKnown RBP7.53□□□□□ -1.2
LTN1-204ENST00000475344 TMEM62Q0P6H9 643 aa7.53□□□□□ -1.2
LTN1-204ENST00000475344 SSPNQ14714 243 aa7.53□□□□□ -1.2
LTN1-204ENST00000475344 KRTAP19-4Q3LI73 84 aa7.53□□□□□ -1.2
LTN1-204ENST00000475344 EEF1DP3Q658K8 133 aa7.53□□□□□ -1.2
LTN1-204ENST00000475344 RPTNQ6XPR3 784 aa7.53□□□□□ -1.2
LTN1-204ENST00000475344 CPNE8Q86YQ8 564 aa7.53□□□□□ -1.2
LTN1-204ENST00000475344 APBA2Q99767 749 aa7.53□□□□□ -1.2
LTN1-204ENST00000475344 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.53□□□□□ -1.2
LTN1-204ENST00000475344 CNTD2Q9H8S5 307 aa7.53□□□□□ -1.2
LTN1-204ENST00000475344 SUSD2Q9UGT4 822 aa7.53□□□□□ -1.2
LTN1-204ENST00000475344 BACE2Q9Y5Z0 518 aa7.53□□□□□ -1.2
LTN1-204ENST00000475344 IRAK3Q9Y616 596 aa7.53□□□□□ -1.2
LTN1-204ENST00000475344 HRKO00198 91 aa7.52□□□□□ -1.21
LTN1-204ENST00000475344 RFXAPO00287 272 aa7.52□□□□□ -1.21
LTN1-204ENST00000475344 PI3P19957 117 aa7.52□□□□□ -1.21
LTN1-204ENST00000475344 CDR1P51861 262 aa7.52□□□□□ -1.21
LTN1-204ENST00000475344 NCKAP1LP55160 1127 aa7.52□□□□□ -1.21
LTN1-204ENST00000475344 FBLN7Q53RD9 439 aa7.52□□□□□ -1.21
LTN1-204ENST00000475344 RCSD1Q6JBY9 416 aa7.52□□□□□ -1.21
LTN1-204ENST00000475344 ARHGEF39Q8N4T4 335 aa7.52□□□□□ -1.21
LTN1-204ENST00000475344 LGR4Q9BXB1 951 aa7.52□□□□□ -1.21
LTN1-204ENST00000475344 ACTR10Q9NZ32 417 aa7.52□□□□□ -1.21
LTN1-204ENST00000475344 ZNF385BQ569K4 471 aa7.51□□□□□ -1.21
LTN1-204ENST00000475344 ZC3H14Q6PJT7 736 aaKnown RBP7.51□□□□□ -1.21
LTN1-204ENST00000475344 C6orf15Q6UXA7 325 aaPredicted RBP7.51□□□□□ -1.21
LTN1-204ENST00000475344 RCC1LQ96I51 464 aaKnown RBP7.51□□□□□ -1.21
LTN1-204ENST00000475344 SIGLEC10Q96LC7 697 aa7.51□□□□□ -1.21
LTN1-204ENST00000475344 PDLIM7Q9NR12 457 aa7.51□□□□□ -1.21
LTN1-204ENST00000475344 DBR1Q9UK59 544 aaKnown RBP7.51□□□□□ -1.21
LTN1-204ENST00000475344 RWDD3Q9Y3V2 267 aa7.51□□□□□ -1.21
LTN1-204ENST00000475344 NOP56O00567 594 aaKnown RBP7.5□□□□□ -1.21
LTN1-204ENST00000475344 N4BP3O15049 544 aa7.5□□□□□ -1.21
LTN1-204ENST00000475344 DDAH1O94760 285 aa7.5□□□□□ -1.21
LTN1-204ENST00000475344 DBHP09172 617 aa7.5□□□□□ -1.21
LTN1-204ENST00000475344 NAT2P11245 290 aa7.5□□□□□ -1.21
LTN1-204ENST00000475344 PAMP19021 973 aa7.5□□□□□ -1.21
LTN1-204ENST00000475344 ZNF200P98182 395 aaPredicted RBP7.5□□□□□ -1.21
LTN1-204ENST00000475344 GRB10Q13322 594 aa7.5□□□□□ -1.21
LTN1-204ENST00000475344 NR1I3Q14994 352 aa7.5□□□□□ -1.21
LTN1-204ENST00000475344 NCAPHQ15003 741 aa7.5□□□□□ -1.21
LTN1-204ENST00000475344 PLEKHN1Q494U1 663 aaPredicted RBP7.5□□□□□ -1.21
LTN1-204ENST00000475344 SIAH1Q8IUQ4 282 aa7.5□□□□□ -1.21
LTN1-204ENST00000475344 BVESQ8NE79 360 aa7.5□□□□□ -1.21
LTN1-204ENST00000475344 PANK1Q8TE04 598 aa7.5□□□□□ -1.21
LTN1-204ENST00000475344 MZB1Q8WU39 189 aa7.5□□□□□ -1.21
LTN1-204ENST00000475344 HCFC2Q9Y5Z7 792 aa7.5□□□□□ -1.21
LTN1-204ENST00000475344 NPHP3-ACAD11A0A0J9YXS1 232 aa7.49□□□□□ -1.21
LTN1-204ENST00000475344 B2RBV5 119 aa7.49□□□□□ -1.21
LTN1-204ENST00000475344 DNAJA1P31689 397 aaKnown RBP7.49□□□□□ -1.21
LTN1-204ENST00000475344 ETFBP38117 255 aa7.49□□□□□ -1.21
LTN1-204ENST00000475344 TNNI3KQ59H18 835 aa7.49□□□□□ -1.21
LTN1-204ENST00000475344 POMZP3Q6PJE2 187 aa7.49□□□□□ -1.21
LTN1-204ENST00000475344 LDHDQ86WU2 507 aa7.49□□□□□ -1.21
LTN1-204ENST00000475344 CRACR2BQ8N4Y2 399 aaPredicted RBP7.49□□□□□ -1.21
LTN1-204ENST00000475344 RXFP1Q9HBX9 757 aa7.49□□□□□ -1.21
LTN1-204ENST00000475344 CLEC1BQ9P126 229 aa7.49□□□□□ -1.21
LTN1-204ENST00000475344 LRP2BPQ9P2M1 347 aa7.49□□□□□ -1.21
LTN1-204ENST00000475344 KRTAP4-8A0A0G2JLE6 195 aa7.48□□□□□ -1.21
LTN1-204ENST00000475344 ZC3H12DA2A288 527 aaKnown RBP7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms