RNA–Protein interactions for RNA: ENST00000474996.6

COL2A1-205, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 3

Gene COL2A1, Length 760 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-205ENST00000474996 ANKRD45Q5TZF3 282 aa17■□□□□ 0.31
COL2A1-205ENST00000474996 FAM126BQ8IXS8 530 aa17■□□□□ 0.31
COL2A1-205ENST00000474996 ZBTB47Q9UFB7 747 aaPredicted RBP17■□□□□ 0.31
COL2A1-205ENST00000474996 ANAPC4Q9UJX5 808 aa17■□□□□ 0.31
COL2A1-205ENST00000474996 TMEM265A0A087WTH1 108 aa16.99■□□□□ 0.31
COL2A1-205ENST00000474996 FOSL2P15408 326 aa16.99■□□□□ 0.31
COL2A1-205ENST00000474996 PTGS1P23219 599 aa16.99■□□□□ 0.31
COL2A1-205ENST00000474996 CCDC96Q2M329 555 aa16.99■□□□□ 0.31
COL2A1-205ENST00000474996 CXCL17Q6UXB2 119 aa16.99■□□□□ 0.31
COL2A1-205ENST00000474996 EVI5LQ96CN4 794 aa16.99■□□□□ 0.31
COL2A1-205ENST00000474996 PPP1R12CQ9BZL4 782 aa16.99■□□□□ 0.31
COL2A1-205ENST00000474996 CYP39A1Q9NYL5 469 aa16.99■□□□□ 0.31
COL2A1-205ENST00000474996 GNEQ9Y223 722 aaKnown RBP16.99■□□□□ 0.31
COL2A1-205ENST00000474996 TLR3O15455 904 aaKnown RBP16.98■□□□□ 0.31
COL2A1-205ENST00000474996 ORC4O43929 436 aa16.98■□□□□ 0.31
COL2A1-205ENST00000474996 CSF2RAP15509 400 aa16.98■□□□□ 0.31
COL2A1-205ENST00000474996 DNAJB2P25686 324 aa16.98■□□□□ 0.31
COL2A1-205ENST00000474996 NOVP48745 357 aa16.98■□□□□ 0.31
COL2A1-205ENST00000474996 RRP1P56182 461 aaKnown RBP16.98■□□□□ 0.31
COL2A1-205ENST00000474996 PPIGQ13427 754 aaKnown RBP eCLIP16.98■□□□□ 0.312e-8■■■□□ 16.9
COL2A1-205ENST00000474996 NSMFQ6X4W1 530 aa16.98■□□□□ 0.31
COL2A1-205ENST00000474996 C16orf59Q7L2K0 433 aa16.98■□□□□ 0.31
COL2A1-205ENST00000474996 EEPD1Q7L9B9 569 aa16.98■□□□□ 0.31
COL2A1-205ENST00000474996 TLK2Q86UE8 772 aa16.98■□□□□ 0.31
COL2A1-205ENST00000474996 PURBQ96QR8 312 aaKnown RBP16.98■□□□□ 0.31
COL2A1-205ENST00000474996 PDGFCQ9NRA1 345 aa16.98■□□□□ 0.31
COL2A1-205ENST00000474996 TOMM22Q9NS69 142 aa16.98■□□□□ 0.31
COL2A1-205ENST00000474996 CCPG1Q9ULG6 757 aa16.98■□□□□ 0.31
COL2A1-205ENST00000474996 SMPD1P17405 629 aa16.97■□□□□ 0.31
COL2A1-205ENST00000474996 SLC16A2P36021 539 aa16.97■□□□□ 0.31
COL2A1-205ENST00000474996 GRIN2CQ14957 1233 aa16.97■□□□□ 0.31
COL2A1-205ENST00000474996 ALX1Q15699 326 aa16.97■□□□□ 0.31
COL2A1-205ENST00000474996 FSCN1Q16658 493 aaKnown RBP16.97■□□□□ 0.31
COL2A1-205ENST00000474996 TMEM240Q5SV17 173 aa16.97■□□□□ 0.31
COL2A1-205ENST00000474996 TTBK2Q6IQ55 1244 aa16.97■□□□□ 0.31
COL2A1-205ENST00000474996 FBXO16Q8IX29 292 aaPredicted RBP16.97■□□□□ 0.31
COL2A1-205ENST00000474996 TMEM199Q8N511 208 aa16.97■□□□□ 0.31
COL2A1-205ENST00000474996 DCAF4Q8WV16 495 aa16.97■□□□□ 0.31
COL2A1-205ENST00000474996 FAM227BQ96M60 508 aa16.97■□□□□ 0.31
COL2A1-205ENST00000474996 CRBNQ96SW2 442 aa16.97■□□□□ 0.31
COL2A1-205ENST00000474996 AP5M1Q9H0R1 490 aa16.97■□□□□ 0.31
COL2A1-205ENST00000474996 HELLSQ9NRZ9 838 aa16.97■□□□□ 0.31
COL2A1-205ENST00000474996 VCANP13611 3396 aa16.96■□□□□ 0.31
COL2A1-205ENST00000474996 DYNC1LI2O43237 492 aaPredicted RBP16.96■□□□□ 0.31
COL2A1-205ENST00000474996 CD4P01730 458 aa16.96■□□□□ 0.31
COL2A1-205ENST00000474996 ICAM1P05362 532 aa16.96■□□□□ 0.31
COL2A1-205ENST00000474996 FGRP09769 529 aa16.96■□□□□ 0.31
COL2A1-205ENST00000474996 ACRP10323 421 aa16.96■□□□□ 0.31
COL2A1-205ENST00000474996 CYP2C18P33260 490 aa16.96■□□□□ 0.31
COL2A1-205ENST00000474996 PDE1AP54750 535 aa16.96■□□□□ 0.31
COL2A1-205ENST00000474996 RRP12Q5JTH9 1297 aaKnown RBP16.96■□□□□ 0.31
COL2A1-205ENST00000474996 TMEM63BQ5T3F8 832 aa16.96■□□□□ 0.31
COL2A1-205ENST00000474996 TAPT1Q6NXT6 567 aa16.96■□□□□ 0.31
COL2A1-205ENST00000474996 TIFAQ96CG3 184 aa16.96■□□□□ 0.31
COL2A1-205ENST00000474996 RANBP17Q9H2T7 1088 aaKnown RBP16.96■□□□□ 0.31
COL2A1-205ENST00000474996 FRMPD2Q68DX3 1309 aaPredicted RBP16.96■□□□□ 0.3
COL2A1-205ENST00000474996 A0A0D9SFI3 127 aa16.95■□□□□ 0.3
COL2A1-205ENST00000474996 CABYRO75952 493 aa16.95■□□□□ 0.3
COL2A1-205ENST00000474996 FGAP02671 866 aa16.95■□□□□ 0.3
COL2A1-205ENST00000474996 ITGA7Q13683 1181 aa16.95■□□□□ 0.3
COL2A1-205ENST00000474996 IQSEC1Q6DN90 963 aa16.95■□□□□ 0.3
COL2A1-205ENST00000474996 ZNF365Q70YC5 407 aa16.95■□□□□ 0.3
COL2A1-205ENST00000474996 SLC43A3Q8NBI5 491 aa16.95■□□□□ 0.3
COL2A1-205ENST00000474996 TMEM47Q9BQJ4 181 aa16.95■□□□□ 0.3
COL2A1-205ENST00000474996 ZNF576Q9H609 170 aa16.95■□□□□ 0.3
COL2A1-205ENST00000474996 GRIN2DO15399 1336 aa16.95■□□□□ 0.3
COL2A1-205ENST00000474996 GRXCR1A8MXD5 290 aa16.94■□□□□ 0.3
COL2A1-205ENST00000474996 TOP1P11387 765 aaKnown RBP16.94■□□□□ 0.3
COL2A1-205ENST00000474996 PSMC6P62333 389 aa16.94■□□□□ 0.3
COL2A1-205ENST00000474996 BAATQ14032 418 aaPredicted RBP16.94■□□□□ 0.3
COL2A1-205ENST00000474996 MCMDC2Q4G0Z9 681 aa16.94■□□□□ 0.3
COL2A1-205ENST00000474996 RASIP1Q5U651 963 aa16.94■□□□□ 0.3
COL2A1-205ENST00000474996 SYDE2Q5VT97 1194 aa16.94■□□□□ 0.3
COL2A1-205ENST00000474996 PSRC1Q6PGN9 363 aaPredicted RBP16.94■□□□□ 0.3
COL2A1-205ENST00000474996 BTNL9Q6UXG8 535 aa16.94■□□□□ 0.3
COL2A1-205ENST00000474996 KIAA1211Q6ZU35 1233 aa16.94■□□□□ 0.3
COL2A1-205ENST00000474996 MORC4Q8TE76 937 aa16.94■□□□□ 0.3
COL2A1-205ENST00000474996 PBX4Q9BYU1 374 aa16.94■□□□□ 0.3
COL2A1-205ENST00000474996 VTA1Q9NP79 307 aa16.94■□□□□ 0.3
COL2A1-205ENST00000474996 GPCPD1Q9NPB8 672 aa16.94■□□□□ 0.3
COL2A1-205ENST00000474996 UMODL1Q5DID0 1318 aa16.94■□□□□ 0.3
COL2A1-205ENST00000474996 MYO9BQ13459 2157 aa16.94■□□□□ 0.3
COL2A1-205ENST00000474996 NFIBO00712 420 aa16.93■□□□□ 0.3
COL2A1-205ENST00000474996 ZEB2O60315 1214 aa16.93■□□□□ 0.3
COL2A1-205ENST00000474996 HSPD1P10809 573 aaKnown RBP16.93■□□□□ 0.3
COL2A1-205ENST00000474996 PBX2P40425 430 aa16.93■□□□□ 0.3
COL2A1-205ENST00000474996 HAND2P61296 217 aa16.93■□□□□ 0.3
COL2A1-205ENST00000474996 ZNF589Q86UQ0 364 aaPredicted RBP16.93■□□□□ 0.3
COL2A1-205ENST00000474996 HIPK3Q9H422 1215 aa16.93■□□□□ 0.3
COL2A1-205ENST00000474996 IL23AQ9NPF7 189 aa16.93■□□□□ 0.3
COL2A1-205ENST00000474996 TCP11L1Q9NUJ3 509 aa16.93■□□□□ 0.3
COL2A1-205ENST00000474996 Q9Y3F1 56 aa16.93■□□□□ 0.3
COL2A1-205ENST00000474996 PTPDC1A2A3K4 754 aa16.92■□□□□ 0.3
COL2A1-205ENST00000474996 B4GALT4O60513 344 aa16.92■□□□□ 0.3
COL2A1-205ENST00000474996 ALDH5A1P51649 535 aaPredicted RBP16.92■□□□□ 0.3
COL2A1-205ENST00000474996 NMIQ13287 307 aaPredicted RBP16.92■□□□□ 0.3
COL2A1-205ENST00000474996 HDAC1Q13547 482 aaPredicted RBP16.92■□□□□ 0.3
COL2A1-205ENST00000474996 TRPV6Q9H1D0 765 aa16.92■□□□□ 0.3
COL2A1-205ENST00000474996 ADD3Q9UEY8 706 aaKnown RBP16.92■□□□□ 0.3
COL2A1-205ENST00000474996 GBF1Q92538 1859 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms