RNA–Protein interactions for RNA: ENST00000474258.1

SEMA4D-216, Transcript of semaphorin 4D, humanhuman

TSL 4

Gene SEMA4D, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-216ENST00000474258 ICAM1P05362 532 aa13.04□□□□□ -0.32
SEMA4D-216ENST00000474258 ASGR1P07306 291 aa13.04□□□□□ -0.32
SEMA4D-216ENST00000474258 RAG1P15918 1043 aa13.04□□□□□ -0.32
SEMA4D-216ENST00000474258 ITGB8P26012 769 aa13.04□□□□□ -0.32
SEMA4D-216ENST00000474258 SNAP25P60880 206 aa13.04□□□□□ -0.32
SEMA4D-216ENST00000474258 MUM1L1Q5H9M0 696 aa13.04□□□□□ -0.32
SEMA4D-216ENST00000474258 GNASQ5JWF2 1037 aa13.04□□□□□ -0.32
SEMA4D-216ENST00000474258 C9orf50Q5SZB4 431 aa13.04□□□□□ -0.32
SEMA4D-216ENST00000474258 AKNAD1Q5T1N1 836 aa13.04□□□□□ -0.32
SEMA4D-216ENST00000474258 BTNL9Q6UXG8 535 aa13.04□□□□□ -0.32
SEMA4D-216ENST00000474258 MFSD6Q6ZSS7 791 aa13.04□□□□□ -0.32
SEMA4D-216ENST00000474258 RASGRP2Q7LDG7 609 aa13.04□□□□□ -0.32
SEMA4D-216ENST00000474258 CHD1LQ86WJ1 897 aa13.04□□□□□ -0.32
SEMA4D-216ENST00000474258 VTI1AQ96AJ9 217 aa13.04□□□□□ -0.32
SEMA4D-216ENST00000474258 TTC14Q96N46 770 aa13.04□□□□□ -0.32
SEMA4D-216ENST00000474258 TMEM47Q9BQJ4 181 aa13.04□□□□□ -0.32
SEMA4D-216ENST00000474258 OSBPL3Q9H4L5 887 aa13.04□□□□□ -0.32
SEMA4D-216ENST00000474258 CCPG1Q9ULG6 757 aa13.04□□□□□ -0.32
SEMA4D-216ENST00000474258 MROH7Q68CQ1 1323 aa13.04□□□□□ -0.32
SEMA4D-216ENST00000474258 LRRC37A2A6NM11 1700 aa13.04□□□□□ -0.32
SEMA4D-216ENST00000474258 SDSP20132 328 aa13.03□□□□□ -0.32
SEMA4D-216ENST00000474258 HAND2P61296 217 aa13.03□□□□□ -0.32
SEMA4D-216ENST00000474258 NKX3-2P78367 333 aa13.03□□□□□ -0.32
SEMA4D-216ENST00000474258 TNFAIP2Q03169 654 aa13.03□□□□□ -0.32
SEMA4D-216ENST00000474258 FAAP100Q0VG06 881 aa13.03□□□□□ -0.32
SEMA4D-216ENST00000474258 TTBK2Q6IQ55 1244 aa13.03□□□□□ -0.32
SEMA4D-216ENST00000474258 NSMFQ6X4W1 530 aa13.03□□□□□ -0.32
SEMA4D-216ENST00000474258 NOL8Q76FK4 1167 aaKnown RBP13.03□□□□□ -0.32
SEMA4D-216ENST00000474258 PLEKHM2Q8IWE5 1019 aa13.03□□□□□ -0.32
SEMA4D-216ENST00000474258 RANBP17Q9H2T7 1088 aaKnown RBP13.03□□□□□ -0.32
SEMA4D-216ENST00000474258 RNF41Q9H4P4 317 aaPredicted RBP13.03□□□□□ -0.32
SEMA4D-216ENST00000474258 CYP39A1Q9NYL5 469 aa13.03□□□□□ -0.32
SEMA4D-216ENST00000474258 SLC16A2P36021 539 aa13.02□□□□□ -0.33
SEMA4D-216ENST00000474258 CDK7P50613 346 aa13.02□□□□□ -0.33
SEMA4D-216ENST00000474258 IRX5P78411 483 aaPredicted RBP13.02□□□□□ -0.33
SEMA4D-216ENST00000474258 NUCB1Q02818 461 aa13.02□□□□□ -0.33
SEMA4D-216ENST00000474258 ZNF697Q5TEC3 545 aa13.02□□□□□ -0.33
SEMA4D-216ENST00000474258 SYDE2Q5VT97 1194 aa13.02□□□□□ -0.33
SEMA4D-216ENST00000474258 GPCPD1Q9NPB8 672 aa13.02□□□□□ -0.33
SEMA4D-216ENST00000474258 PNMA2Q9UL42 364 aa13.02□□□□□ -0.33
SEMA4D-216ENST00000474258 GNEQ9Y223 722 aaKnown RBP13.02□□□□□ -0.33
SEMA4D-216ENST00000474258 MYO9BQ13459 2157 aa13.02□□□□□ -0.33
SEMA4D-216ENST00000474258 A0A0U1RQG5 324 aaPredicted RBP13.01□□□□□ -0.33
SEMA4D-216ENST00000474258 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.01□□□□□ -0.33
SEMA4D-216ENST00000474258 ARVCFO00192 962 aa13.01□□□□□ -0.33
SEMA4D-216ENST00000474258 ZNF213O14771 459 aa13.01□□□□□ -0.33
SEMA4D-216ENST00000474258 TIMP1P01033 207 aa13.01□□□□□ -0.33
SEMA4D-216ENST00000474258 PDHBP11177 359 aa13.01□□□□□ -0.33
SEMA4D-216ENST00000474258 SMAD3P84022 425 aaKnown RBP13.01□□□□□ -0.33
SEMA4D-216ENST00000474258 FPGSQ05932 587 aa13.01□□□□□ -0.33
SEMA4D-216ENST00000474258 IQSEC1Q6DN90 963 aa13.01□□□□□ -0.33
SEMA4D-216ENST00000474258 ESR2Q92731 530 aa13.01□□□□□ -0.33
SEMA4D-216ENST00000474258 AP5M1Q9H0R1 490 aa13.01□□□□□ -0.33
SEMA4D-216ENST00000474258 Q9Y3F1 56 aa13.01□□□□□ -0.33
SEMA4D-216ENST00000474258 ASTN1O14525 1302 aa13.01□□□□□ -0.33
SEMA4D-216ENST00000474258 FRMPD2Q68DX3 1309 aaPredicted RBP13.01□□□□□ -0.33
SEMA4D-216ENST00000474258 LOC102724159A0A0B4J2E5 919 aa13□□□□□ -0.33
SEMA4D-216ENST00000474258 HIP1O00291 1037 aa13□□□□□ -0.33
SEMA4D-216ENST00000474258 CTAGE5O15320 804 aa13□□□□□ -0.33
SEMA4D-216ENST00000474258 TLR3O15455 904 aaKnown RBP13□□□□□ -0.33
SEMA4D-216ENST00000474258 ZEB2O60315 1214 aa13□□□□□ -0.33
SEMA4D-216ENST00000474258 NT5C2P49902 561 aa13□□□□□ -0.33
SEMA4D-216ENST00000474258 BEX3Q00994 111 aa13□□□□□ -0.33
SEMA4D-216ENST00000474258 ZNF543Q08ER8 600 aa13□□□□□ -0.33
SEMA4D-216ENST00000474258 BAATQ14032 418 aaPredicted RBP13□□□□□ -0.33
SEMA4D-216ENST00000474258 PWP2Q15269 919 aaKnown RBP13□□□□□ -0.33
SEMA4D-216ENST00000474258 CCDC178Q5BJE1 867 aa13□□□□□ -0.33
SEMA4D-216ENST00000474258 TAPT1Q6NXT6 567 aa13□□□□□ -0.33
SEMA4D-216ENST00000474258 CWC27Q6UX04 472 aaKnown RBP13□□□□□ -0.33
SEMA4D-216ENST00000474258 EEPD1Q7L9B9 569 aa13□□□□□ -0.33
SEMA4D-216ENST00000474258 TLK2Q86UE8 772 aa13□□□□□ -0.33
SEMA4D-216ENST00000474258 TBC1D10CQ8IV04 446 aa13□□□□□ -0.33
SEMA4D-216ENST00000474258 MORC4Q8TE76 937 aa13□□□□□ -0.33
SEMA4D-216ENST00000474258 RNPC3Q96LT9 517 aaKnown RBP13□□□□□ -0.33
SEMA4D-216ENST00000474258 FAM161BQ96MY7 647 aa13□□□□□ -0.33
SEMA4D-216ENST00000474258 GUCD1Q96NT3 240 aa13□□□□□ -0.33
SEMA4D-216ENST00000474258 VTA1Q9NP79 307 aa13□□□□□ -0.33
SEMA4D-216ENST00000474258 PDGFCQ9NRA1 345 aa13□□□□□ -0.33
SEMA4D-216ENST00000474258 ADD3Q9UEY8 706 aaKnown RBP13□□□□□ -0.33
SEMA4D-216ENST00000474258 TBX21Q9UL17 535 aa13□□□□□ -0.33
SEMA4D-216ENST00000474258 LAMA2P24043 3122 aaKnown RBP12.99□□□□□ -0.33
SEMA4D-216ENST00000474258 PTPDC1A2A3K4 754 aa12.99□□□□□ -0.33
SEMA4D-216ENST00000474258 DYNC1LI2O43237 492 aaPredicted RBP12.99□□□□□ -0.33
SEMA4D-216ENST00000474258 CABYRO75952 493 aa12.99□□□□□ -0.33
SEMA4D-216ENST00000474258 SNHG28P0DPA3 235 aa12.99□□□□□ -0.33
SEMA4D-216ENST00000474258 SMPD1P17405 629 aa12.99□□□□□ -0.33
SEMA4D-216ENST00000474258 EPHB4P54760 987 aa12.99□□□□□ -0.33
SEMA4D-216ENST00000474258 FSCN1Q16658 493 aaKnown RBP12.99□□□□□ -0.33
SEMA4D-216ENST00000474258 MFSD5Q6N075 450 aa12.99□□□□□ -0.33
SEMA4D-216ENST00000474258 KIAA1211Q6ZU35 1233 aa12.99□□□□□ -0.33
SEMA4D-216ENST00000474258 IQCA1Q86XH1 822 aa12.99□□□□□ -0.33
SEMA4D-216ENST00000474258 DGKHQ86XP1 1220 aa12.99□□□□□ -0.33
SEMA4D-216ENST00000474258 FBXO16Q8IX29 292 aaPredicted RBP12.99□□□□□ -0.33
SEMA4D-216ENST00000474258 FAM126BQ8IXS8 530 aa12.99□□□□□ -0.33
SEMA4D-216ENST00000474258 PURBQ96QR8 312 aaKnown RBP12.99□□□□□ -0.33
SEMA4D-216ENST00000474258 SEZ6LQ9BYH1 1024 aa12.99□□□□□ -0.33
SEMA4D-216ENST00000474258 SEMA6BQ9H3T3 888 aa12.99□□□□□ -0.33
SEMA4D-216ENST00000474258 DIAPH3Q9NSV4 1193 aa12.99□□□□□ -0.33
SEMA4D-216ENST00000474258 MYH7BA7E2Y1 1941 aa12.99□□□□□ -0.33
SEMA4D-216ENST00000474258 KIAA1217Q5T5P2 1943 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms