RNA–Protein interactions for RNA: ENST00000474136.5

APP-215, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,309 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-215ENST00000474136 PCDHB15Q9Y5E8 787 aa24.06■■□□□ 1.44
APP-215ENST00000474136 XIRP2A4UGR9 3374 aa24.05■■□□□ 1.44
APP-215ENST00000474136 SOWAHBA6NEL2 793 aa24.05■■□□□ 1.44
APP-215ENST00000474136 B4GALT4O60513 344 aa24.05■■□□□ 1.44
APP-215ENST00000474136 REV3LO60673 3130 aa24.05■■□□□ 1.44
APP-215ENST00000474136 PRDM1O75626 825 aa24.05■■□□□ 1.44
APP-215ENST00000474136 BMP1P13497 986 aa24.05■■□□□ 1.44
APP-215ENST00000474136 PSMC6P62333 389 aa24.05■■□□□ 1.44
APP-215ENST00000474136 HDAC1Q13547 482 aaPredicted RBP24.05■■□□□ 1.44
APP-215ENST00000474136 FSCN1Q16658 493 aaKnown RBP24.05■■□□□ 1.44
APP-215ENST00000474136 ZSCAN25Q6NSZ9 544 aa24.05■■□□□ 1.44
APP-215ENST00000474136 CEP95Q96GE4 821 aa24.05■■□□□ 1.44
APP-215ENST00000474136 DYNC1LI2O43237 492 aaPredicted RBP24.04■■□□□ 1.44
APP-215ENST00000474136 CABYRO75952 493 aa24.04■■□□□ 1.44
APP-215ENST00000474136 OAZ1P54368 228 aa24.04■■□□□ 1.44
APP-215ENST00000474136 TMEM63BQ5T3F8 832 aa24.04■■□□□ 1.44
APP-215ENST00000474136 MKL1Q969V6 931 aa24.04■■□□□ 1.44
APP-215ENST00000474136 FAM122AQ96E09 287 aa24.04■■□□□ 1.44
APP-215ENST00000474136 SCLYQ96I15 445 aa24.04■■□□□ 1.44
APP-215ENST00000474136 A1CFQ9NQ94 594 aaKnown RBP24.04■■□□□ 1.44
APP-215ENST00000474136 PDGFCQ9NRA1 345 aa24.04■■□□□ 1.44
APP-215ENST00000474136 SLC4A7Q9Y6M7 1214 aa24.04■■□□□ 1.44
APP-215ENST00000474136 GBF1Q92538 1859 aa24.03■■□□□ 1.44
APP-215ENST00000474136 ZBBXA8MT70 800 aa24.03■■□□□ 1.44
APP-215ENST00000474136 SMPD1P17405 629 aa24.03■■□□□ 1.44
APP-215ENST00000474136 KCNQ1P51787 676 aa24.03■■□□□ 1.44
APP-215ENST00000474136 CHMP4CQ96CF2 233 aa24.03■■□□□ 1.44
APP-215ENST00000474136 AGBL1Q96MI9 1066 aa24.03■■□□□ 1.44
APP-215ENST00000474136 TSPYL2Q9H2G4 693 aaPredicted RBP24.03■■□□□ 1.44
APP-215ENST00000474136 ACAD9Q9H845 621 aa24.03■■□□□ 1.44
APP-215ENST00000474136 EPB41L4AQ9HCS5 686 aaPredicted RBP24.03■■□□□ 1.44
APP-215ENST00000474136 MTMR4Q9NYA4 1195 aa24.03■■□□□ 1.44
APP-215ENST00000474136 TCF20Q9UGU0 1960 aaKnown RBP24.02■■□□□ 1.44
APP-215ENST00000474136 RFXAPO00287 272 aa24.02■■□□□ 1.44
APP-215ENST00000474136 SLFN13Q68D06 897 aa24.02■■□□□ 1.44
APP-215ENST00000474136 OSBP2Q969R2 916 aa24.02■■□□□ 1.44
APP-215ENST00000474136 AP5M1Q9H0R1 490 aa24.02■■□□□ 1.44
APP-215ENST00000474136 RNF146Q9NTX7 359 aa24.02■■□□□ 1.44
APP-215ENST00000474136 ISY1Q9ULR0 285 aaKnown RBP24.02■■□□□ 1.44
APP-215ENST00000474136 PCDHA11Q9Y5I1 949 aa24.02■■□□□ 1.44
APP-215ENST00000474136 ZNF536O15090 1300 aa24.01■■□□□ 1.43
APP-215ENST00000474136 TMEM232C9JQI7 657 aa24.01■■□□□ 1.43
APP-215ENST00000474136 BMP3P12645 472 aa24.01■■□□□ 1.43
APP-215ENST00000474136 EEPD1Q7L9B9 569 aa24.01■■□□□ 1.43
APP-215ENST00000474136 ZNF444Q8N0Y2 327 aaPredicted RBP24.01■■□□□ 1.43
APP-215ENST00000474136 GMCL1P1Q8NEA9 526 aa24.01■■□□□ 1.43
APP-215ENST00000474136 ASB14A6NK59 587 aa24■■□□□ 1.43
APP-215ENST00000474136 TTLL1O95922 423 aa24■■□□□ 1.43
APP-215ENST00000474136 ATP2A2P16615 1042 aaKnown RBP24■■□□□ 1.43
APP-215ENST00000474136 TTLL4Q14679 1199 aa24■■□□□ 1.43
APP-215ENST00000474136 SKIV2LQ15477 1246 aaKnown RBP24■■□□□ 1.43
APP-215ENST00000474136 B4GALNT3Q6L9W6 998 aa24■■□□□ 1.43
APP-215ENST00000474136 GIMAP6Q6P9H5 292 aa24■■□□□ 1.43
APP-215ENST00000474136 CENPQQ7L2Z9 268 aaPredicted RBP24■■□□□ 1.43
APP-215ENST00000474136 FBXO16Q8IX29 292 aaPredicted RBP24■■□□□ 1.43
APP-215ENST00000474136 RPUSD2Q8IZ73 545 aaKnown RBP24■■□□□ 1.43
APP-215ENST00000474136 MYH7P12883 1935 aa23.99■■□□□ 1.43
APP-215ENST00000474136 SMARCA5O60264 1052 aaPredicted RBP23.99■■□□□ 1.43
APP-215ENST00000474136 SNAP25P60880 206 aa23.99■■□□□ 1.43
APP-215ENST00000474136 TAPT1Q6NXT6 567 aa23.99■■□□□ 1.43
APP-215ENST00000474136 CERS4Q9HA82 394 aa23.99■■□□□ 1.43
APP-215ENST00000474136 ZEB2O60315 1214 aa23.98■■□□□ 1.43
APP-215ENST00000474136 TRERF1Q96PN7 1200 aa23.98■■□□□ 1.43
APP-215ENST00000474136 PURBQ96QR8 312 aaKnown RBP23.98■■□□□ 1.43
APP-215ENST00000474136 TRMT13Q9NUP7 481 aaKnown RBP23.98■■□□□ 1.43
APP-215ENST00000474136 MYH4Q9Y623 1939 aa23.97■■□□□ 1.43
APP-215ENST00000474136 CA3P07451 260 aa23.97■■□□□ 1.43
APP-215ENST00000474136 CYP2C9P11712 490 aa23.97■■□□□ 1.43
APP-215ENST00000474136 ALAS1P13196 640 aa23.97■■□□□ 1.43
APP-215ENST00000474136 TDO2P48775 406 aa23.97■■□□□ 1.43
APP-215ENST00000474136 STAT2P52630 851 aa23.97■■□□□ 1.43
APP-215ENST00000474136 MUM1L1Q5H9M0 696 aa23.97■■□□□ 1.43
APP-215ENST00000474136 KRT40Q6A162 431 aa23.97■■□□□ 1.43
APP-215ENST00000474136 C1QTNF1Q9BXJ1 281 aa23.97■■□□□ 1.43
APP-215ENST00000474136 ALDH8A1Q9H2A2 487 aaPredicted RBP23.97■■□□□ 1.43
APP-215ENST00000474136 SYNPO2Q9UMS6 1093 aa23.97■■□□□ 1.43
APP-215ENST00000474136 MTCH2Q9Y6C9 303 aa23.97■■□□□ 1.43
APP-215ENST00000474136 PRRC2BQ5JSZ5 2229 aaKnown RBP23.97■■□□□ 1.43
APP-215ENST00000474136 EPOPA6NHQ4 379 aa23.96■■□□□ 1.43
APP-215ENST00000474136 ERC2O15083 957 aa23.96■■□□□ 1.43
APP-215ENST00000474136 GPAA1O43292 621 aa23.96■■□□□ 1.43
APP-215ENST00000474136 FDX1P10109 184 aa23.96■■□□□ 1.43
APP-215ENST00000474136 IKQ13123 557 aaPredicted RBP23.96■■□□□ 1.43
APP-215ENST00000474136 IQSEC1Q6DN90 963 aa23.96■■□□□ 1.43
APP-215ENST00000474136 DEFB128Q7Z7B8 93 aa23.96■■□□□ 1.43
APP-215ENST00000474136 APPBP2Q92624 585 aa23.96■■□□□ 1.43
APP-215ENST00000474136 SEZ6LQ9BYH1 1024 aa23.96■■□□□ 1.43
APP-215ENST00000474136 M0R2C6 588 aa23.95■■□□□ 1.42
APP-215ENST00000474136 APPP05067 770 aa23.95■■□□□ 1.42
APP-215ENST00000474136 AAK1Q2M2I8 961 aa23.95■■□□□ 1.42
APP-215ENST00000474136 TMEM67Q5HYA8 995 aa23.95■■□□□ 1.42
APP-215ENST00000474136 KBTBD3Q8NAB2 608 aa23.95■■□□□ 1.42
APP-215ENST00000474136 NEDD1Q8NHV4 660 aa23.95■■□□□ 1.42
APP-215ENST00000474136 STAG1Q8WVM7 1258 aa23.95■■□□□ 1.42
APP-215ENST00000474136 EPHX3Q9H6B9 360 aa23.95■■□□□ 1.42
APP-215ENST00000474136 ARHGEF15O94989 841 aa23.94■■□□□ 1.42
APP-215ENST00000474136 TSPY3P0CV98 308 aa23.94■■□□□ 1.42
APP-215ENST00000474136 TSPY8P0CW00 308 aa23.94■■□□□ 1.42
APP-215ENST00000474136 MCCP23508 829 aa23.94■■□□□ 1.42
APP-215ENST00000474136 TKFCQ3LXA3 575 aa23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms