RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 PRDM5Q9NQX1 630 aaPredicted RBP18.01■□□□□ 0.47
VTI1A-203ENST00000472892 CYP39A1Q9NYL5 469 aa18.01■□□□□ 0.47
VTI1A-203ENST00000472892 CCPG1Q9ULG6 757 aa18.01■□□□□ 0.47
VTI1A-203ENST00000472892 SUPT16HQ9Y5B9 1047 aaKnown RBP18.01■□□□□ 0.47
VTI1A-203ENST00000472892 MYADML2A6NDP7 307 aa18■□□□□ 0.47
VTI1A-203ENST00000472892 SNHG28P0DPA3 235 aa18■□□□□ 0.47
VTI1A-203ENST00000472892 PDHBP11177 359 aa18■□□□□ 0.47
VTI1A-203ENST00000472892 NT5C2P49902 561 aa18■□□□□ 0.47
VTI1A-203ENST00000472892 NKX3-2P78367 333 aa18■□□□□ 0.47
VTI1A-203ENST00000472892 SYDE2Q5VT97 1194 aa18■□□□□ 0.47
VTI1A-203ENST00000472892 ANKRD33Q7Z3H0 272 aa18■□□□□ 0.47
VTI1A-203ENST00000472892 ESR2Q92731 530 aa18■□□□□ 0.47
VTI1A-203ENST00000472892 BADQ92934 168 aa18■□□□□ 0.47
VTI1A-203ENST00000472892 GPCPD1Q9NPB8 672 aa18■□□□□ 0.47
VTI1A-203ENST00000472892 DIAPH3Q9NSV4 1193 aa18■□□□□ 0.47
VTI1A-203ENST00000472892 ASTN1O14525 1302 aa17.99■□□□□ 0.47
VTI1A-203ENST00000472892 KIAA0355O15063 1070 aa17.99■□□□□ 0.47
VTI1A-203ENST00000472892 CLTBP09497 229 aa17.99■□□□□ 0.47
VTI1A-203ENST00000472892 ITGB8P26012 769 aa17.99■□□□□ 0.47
VTI1A-203ENST00000472892 IRX5P78411 483 aaPredicted RBP17.99■□□□□ 0.47
VTI1A-203ENST00000472892 ZNF543Q08ER8 600 aa17.99■□□□□ 0.47
VTI1A-203ENST00000472892 DGKHQ86XP1 1220 aa17.99■□□□□ 0.47
VTI1A-203ENST00000472892 PCSK9Q8NBP7 692 aaKnown RBP17.99■□□□□ 0.47
VTI1A-203ENST00000472892 SPC25Q9HBM1 224 aa17.99■□□□□ 0.47
VTI1A-203ENST00000472892 STARD7Q9NQZ5 370 aa17.99■□□□□ 0.47
VTI1A-203ENST00000472892 ELP1O95163 1332 aa17.98■□□□□ 0.47
VTI1A-203ENST00000472892 NEDD4P46934 1319 aa17.98■□□□□ 0.47
VTI1A-203ENST00000472892 FRMPD2Q68DX3 1309 aaPredicted RBP17.98■□□□□ 0.47
VTI1A-203ENST00000472892 CTAGE5O15320 804 aa17.98■□□□□ 0.47
VTI1A-203ENST00000472892 C6orf222P0C671 652 aaPredicted RBP17.98■□□□□ 0.47
VTI1A-203ENST00000472892 NSMFQ6X4W1 530 aa17.98■□□□□ 0.47
VTI1A-203ENST00000472892 DEFB123Q8N688 67 aa17.98■□□□□ 0.47
VTI1A-203ENST00000472892 MORC4Q8TE76 937 aa17.98■□□□□ 0.47
VTI1A-203ENST00000472892 ANKS1AQ92625 1134 aa17.98■□□□□ 0.47
VTI1A-203ENST00000472892 DSCC1Q9BVC3 393 aa17.98■□□□□ 0.47
VTI1A-203ENST00000472892 LTBP2Q14767 1821 aa17.98■□□□□ 0.47
VTI1A-203ENST00000472892 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.97■□□□□ 0.47
VTI1A-203ENST00000472892 PQBP1O60828 265 aaKnown RBP17.97■□□□□ 0.47
VTI1A-203ENST00000472892 ASGR1P07306 291 aa17.97■□□□□ 0.47
VTI1A-203ENST00000472892 CDK7P50613 346 aa17.97■□□□□ 0.47
VTI1A-203ENST00000472892 TNFAIP2Q03169 654 aa17.97■□□□□ 0.47
VTI1A-203ENST00000472892 FAAP100Q0VG06 881 aa17.97■□□□□ 0.47
VTI1A-203ENST00000472892 SHHQ15465 462 aa17.97■□□□□ 0.47
VTI1A-203ENST00000472892 CCDC178Q5BJE1 867 aa17.97■□□□□ 0.47
VTI1A-203ENST00000472892 GNASQ5JWF2 1037 aa17.97■□□□□ 0.47
VTI1A-203ENST00000472892 Q7L0L9 218 aa17.97■□□□□ 0.47
VTI1A-203ENST00000472892 GLT1D1Q96MS3 346 aa17.97■□□□□ 0.47
VTI1A-203ENST00000472892 ZKSCAN3Q9BRR0 538 aa17.97■□□□□ 0.47
VTI1A-203ENST00000472892 PNMA2Q9UL42 364 aa17.97■□□□□ 0.47
VTI1A-203ENST00000472892 GNEQ9Y223 722 aaKnown RBP17.97■□□□□ 0.47
VTI1A-203ENST00000472892 DCDC2CA8MYV0 355 aa17.96■□□□□ 0.47
VTI1A-203ENST00000472892 PDE4AP27815 886 aa17.96■□□□□ 0.47
VTI1A-203ENST00000472892 BAATQ14032 418 aaPredicted RBP17.96■□□□□ 0.47
VTI1A-203ENST00000472892 C9orf50Q5SZB4 431 aa17.96■□□□□ 0.47
VTI1A-203ENST00000472892 IQSEC1Q6DN90 963 aa17.96■□□□□ 0.47
VTI1A-203ENST00000472892 FAM109BQ6ICB4 259 aaPredicted RBP17.96■□□□□ 0.47
VTI1A-203ENST00000472892 TAPT1Q6NXT6 567 aa17.96■□□□□ 0.47
VTI1A-203ENST00000472892 CLEC4DQ8WXI8 215 aa17.96■□□□□ 0.47
VTI1A-203ENST00000472892 PURBQ96QR8 312 aaKnown RBP17.96■□□□□ 0.47
VTI1A-203ENST00000472892 TMEM39AQ9NV64 488 aa17.96■□□□□ 0.47
VTI1A-203ENST00000472892 MTMR10Q9NXD2 777 aa17.96■□□□□ 0.47
VTI1A-203ENST00000472892 CTNNA3Q9UI47 895 aa17.96■□□□□ 0.47
VTI1A-203ENST00000472892 DDX49Q9Y6V7 483 aaKnown RBP17.96■□□□□ 0.47
VTI1A-203ENST00000472892 MCM3APO60318 1980 aa17.95■□□□□ 0.46
VTI1A-203ENST00000472892 LOC102724159A0A0B4J2E5 919 aa17.95■□□□□ 0.46
VTI1A-203ENST00000472892 NFIBO00712 420 aa17.95■□□□□ 0.46
VTI1A-203ENST00000472892 KDM4AO75164 1064 aa17.95■□□□□ 0.46
VTI1A-203ENST00000472892 RAG1P15918 1043 aa17.95■□□□□ 0.46
VTI1A-203ENST00000472892 SMPD1P17405 629 aa17.95■□□□□ 0.46
VTI1A-203ENST00000472892 PWP2Q15269 919 aaKnown RBP17.95■□□□□ 0.46
VTI1A-203ENST00000472892 IMMTQ16891 758 aaKnown RBP17.95■□□□□ 0.46
VTI1A-203ENST00000472892 GPATCH4Q5T3I0 446 aaKnown RBP17.95■□□□□ 0.46
VTI1A-203ENST00000472892 IQCA1Q86XH1 822 aa17.95■□□□□ 0.46
VTI1A-203ENST00000472892 PDGFCQ9NRA1 345 aa17.95■□□□□ 0.46
VTI1A-203ENST00000472892 ZSWIM5Q9P217 1185 aa17.95■□□□□ 0.46
VTI1A-203ENST00000472892 ADD3Q9UEY8 706 aaKnown RBP17.95■□□□□ 0.46
VTI1A-203ENST00000472892 Q9Y3F1 56 aa17.95■□□□□ 0.46
VTI1A-203ENST00000472892 B4E1Z4 1266 aa17.94■□□□□ 0.46
VTI1A-203ENST00000472892 ARVCFO00192 962 aa17.94■□□□□ 0.46
VTI1A-203ENST00000472892 TTC22Q5TAA0 569 aa17.94■□□□□ 0.46
VTI1A-203ENST00000472892 NOL8Q76FK4 1167 aaKnown RBP17.94■□□□□ 0.46
VTI1A-203ENST00000472892 VTI1AQ96AJ9 217 aa17.94■□□□□ 0.46
VTI1A-203ENST00000472892 ZSCAN10Q96SZ4 725 aaPredicted RBP17.94■□□□□ 0.46
VTI1A-203ENST00000472892 IL25Q9H293 177 aa17.94■□□□□ 0.46
VTI1A-203ENST00000472892 VTA1Q9NP79 307 aa17.94■□□□□ 0.46
VTI1A-203ENST00000472892 MROH7Q68CQ1 1323 aa17.94■□□□□ 0.46
VTI1A-203ENST00000472892 WDR19Q8NEZ3 1342 aa17.94■□□□□ 0.46
VTI1A-203ENST00000472892 A0A0U1RQG5 324 aaPredicted RBP17.93■□□□□ 0.46
VTI1A-203ENST00000472892 GOLGA8HP0CJ92 632 aa17.93■□□□□ 0.46
VTI1A-203ENST00000472892 ALDH5A1P51649 535 aaPredicted RBP17.93■□□□□ 0.46
VTI1A-203ENST00000472892 BEX3Q00994 111 aa17.93■□□□□ 0.46
VTI1A-203ENST00000472892 RNF207Q6ZRF8 634 aa17.93■□□□□ 0.46
VTI1A-203ENST00000472892 EEPD1Q7L9B9 569 aa17.93■□□□□ 0.46
VTI1A-203ENST00000472892 TLK2Q86UE8 772 aa17.93■□□□□ 0.46
VTI1A-203ENST00000472892 FBXO16Q8IX29 292 aaPredicted RBP17.93■□□□□ 0.46
VTI1A-203ENST00000472892 PNMA1Q8ND90 353 aa17.93■□□□□ 0.46
VTI1A-203ENST00000472892 TBX21Q9UL17 535 aa17.93■□□□□ 0.46
VTI1A-203ENST00000472892 PTPDC1A2A3K4 754 aa17.92■□□□□ 0.46
VTI1A-203ENST00000472892 DYNC1LI2O43237 492 aaPredicted RBP17.92■□□□□ 0.46
VTI1A-203ENST00000472892 TIMP1P01033 207 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms