RNA–Protein interactions for RNA: ENST00000472760.1

PRPF40A-208, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 243 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-208ENST00000472760 TKFCQ3LXA3 575 aa7.02□□□□□ -1.29
PRPF40A-208ENST00000472760 ZPBP2Q6X784 338 aa7.02□□□□□ -1.29
PRPF40A-208ENST00000472760 SPRED2Q7Z698 418 aa7.02□□□□□ -1.29
PRPF40A-208ENST00000472760 KIAA0907Q7Z7F0 614 aaPredicted RBP7.02□□□□□ -1.29
PRPF40A-208ENST00000472760 DTX1Q86Y01 620 aa7.02□□□□□ -1.29
PRPF40A-208ENST00000472760 FLCNQ8NFG4 579 aa7.02□□□□□ -1.29
PRPF40A-208ENST00000472760 FRS2Q8WU20 508 aa7.02□□□□□ -1.29
PRPF40A-208ENST00000472760 NCOA5Q9HCD5 579 aaKnown RBP7.02□□□□□ -1.29
PRPF40A-208ENST00000472760 CLEC1BQ9P126 229 aa7.02□□□□□ -1.29
PRPF40A-208ENST00000472760 CCDC39Q9UFE4 941 aa7.02□□□□□ -1.29
PRPF40A-208ENST00000472760 CD2APQ9Y5K6 639 aa7.02□□□□□ -1.29
PRPF40A-208ENST00000472760 SBNO2Q9Y2G9 1366 aa7.02□□□□□ -1.29
PRPF40A-208ENST00000472760 TMEM82A0PJX8 343 aa7.01□□□□□ -1.29
PRPF40A-208ENST00000472760 BLACEA4D250 179 aa7.01□□□□□ -1.29
PRPF40A-208ENST00000472760 PLD2O14939 933 aa7.01□□□□□ -1.29
PRPF40A-208ENST00000472760 FGF10O15520 208 aaPredicted RBP7.01□□□□□ -1.29
PRPF40A-208ENST00000472760 MEFVO15553 781 aaPredicted RBP7.01□□□□□ -1.29
PRPF40A-208ENST00000472760 TBC1D8O95759 1140 aa7.01□□□□□ -1.29
PRPF40A-208ENST00000472760 PLS3P13797 630 aa7.01□□□□□ -1.29
PRPF40A-208ENST00000472760 PAMP19021 973 aa7.01□□□□□ -1.29
PRPF40A-208ENST00000472760 SPINK2P20155 84 aa7.01□□□□□ -1.29
PRPF40A-208ENST00000472760 C21orf62-AS1Q17RA5 79 aa7.01□□□□□ -1.29
PRPF40A-208ENST00000472760 SLC35F1Q5T1Q4 408 aa7.01□□□□□ -1.29
PRPF40A-208ENST00000472760 ZNF574Q6ZN55 896 aaPredicted RBP7.01□□□□□ -1.29
PRPF40A-208ENST00000472760 ZNF662Q6ZS27 426 aa7.01□□□□□ -1.29
PRPF40A-208ENST00000472760 PPIL6Q8IXY8 311 aa7.01□□□□□ -1.29
PRPF40A-208ENST00000472760 KREMEN2Q8NCW0 462 aa7.01□□□□□ -1.29
PRPF40A-208ENST00000472760 PTCHD1Q96NR3 888 aa7.01□□□□□ -1.29
PRPF40A-208ENST00000472760 MRPL4Q9BYD3 311 aaKnown RBP7.01□□□□□ -1.29
PRPF40A-208ENST00000472760 SLAMF8Q9P0V8 285 aa7.01□□□□□ -1.29
PRPF40A-208ENST00000472760 TRBV23OR9-2A0A075B6M9 112 aa7□□□□□ -1.29
PRPF40A-208ENST00000472760 NPHP3-ACAD11A0A0J9YXS1 232 aa7□□□□□ -1.29
PRPF40A-208ENST00000472760 RAPGEF3O95398 923 aa7□□□□□ -1.29
PRPF40A-208ENST00000472760 GYS2P54840 703 aa7□□□□□ -1.29
PRPF40A-208ENST00000472760 GABREP78334 506 aa7□□□□□ -1.29
PRPF40A-208ENST00000472760 CBX2Q14781 532 aaPredicted RBP7□□□□□ -1.29
PRPF40A-208ENST00000472760 IQCEQ6IPM2 695 aa7□□□□□ -1.29
PRPF40A-208ENST00000472760 CYP2R1Q6VVX0 501 aa7□□□□□ -1.29
PRPF40A-208ENST00000472760 NPLOC4Q8TAT6 608 aa7□□□□□ -1.29
PRPF40A-208ENST00000472760 DCAF4Q8WV16 495 aa7□□□□□ -1.29
PRPF40A-208ENST00000472760 C1orf159Q96HA4 380 aa7□□□□□ -1.29
PRPF40A-208ENST00000472760 FCRL2Q96LA5 508 aaPredicted RBP7□□□□□ -1.29
PRPF40A-208ENST00000472760 ANKRD62A6NC57 917 aa6.99□□□□□ -1.29
PRPF40A-208ENST00000472760 KIAA1324LA8MWY0 1029 aaPredicted RBP6.99□□□□□ -1.29
PRPF40A-208ENST00000472760 ADAM23O75077 832 aa6.99□□□□□ -1.29
PRPF40A-208ENST00000472760 DUSP4Q13115 394 aa6.99□□□□□ -1.29
PRPF40A-208ENST00000472760 LAPTM5Q13571 262 aa6.99□□□□□ -1.29
PRPF40A-208ENST00000472760 NTRK3Q16288 839 aa6.99□□□□□ -1.29
PRPF40A-208ENST00000472760 FNDC3BQ53EP0 1204 aaKnown RBP6.99□□□□□ -1.29
PRPF40A-208ENST00000472760 ACBD5Q5T8D3 534 aaPredicted RBP6.99□□□□□ -1.29
PRPF40A-208ENST00000472760 HLA-DQA1Q5Y7H0 255 aa6.99□□□□□ -1.29
PRPF40A-208ENST00000472760 E4F1Q66K89 784 aaPredicted RBP6.99□□□□□ -1.29
PRPF40A-208ENST00000472760 DENND5AQ6IQ26 1287 aa6.99□□□□□ -1.29
PRPF40A-208ENST00000472760 DIO2Q92813 273 aa6.99□□□□□ -1.29
PRPF40A-208ENST00000472760 PTPRN2Q92932 1015 aa6.99□□□□□ -1.29
PRPF40A-208ENST00000472760 ALPK1Q96QP1 1244 aa6.99□□□□□ -1.29
PRPF40A-208ENST00000472760 PCMTD2Q9NV79 361 aa6.99□□□□□ -1.29
PRPF40A-208ENST00000472760 ERVK13-1Q9NX77 482 aa6.99□□□□□ -1.29
PRPF40A-208ENST00000472760 NDOR1Q9UHB4 597 aa6.99□□□□□ -1.29
PRPF40A-208ENST00000472760 SFMBT1Q9UHJ3 866 aa6.99□□□□□ -1.29
PRPF40A-208ENST00000472760 ZNF281Q9Y2X9 895 aa6.99□□□□□ -1.29
PRPF40A-208ENST00000472760 EFCAB14O75071 495 aa6.98□□□□□ -1.29
PRPF40A-208ENST00000472760 RFPL3O75679 317 aa6.98□□□□□ -1.29
PRPF40A-208ENST00000472760 WNT11O96014 354 aa6.98□□□□□ -1.29
PRPF40A-208ENST00000472760 APPP05067 770 aa6.98□□□□□ -1.29
PRPF40A-208ENST00000472760 C6orf222P0C671 652 aaPredicted RBP6.98□□□□□ -1.29
PRPF40A-208ENST00000472760 LTBRP36941 435 aa6.98□□□□□ -1.29
PRPF40A-208ENST00000472760 KCNAB2Q13303 367 aa6.98□□□□□ -1.29
PRPF40A-208ENST00000472760 PABPC4Q13310 644 aaKnown RBP eCLIP6.98□□□□□ -1.29
PRPF40A-208ENST00000472760 MAMDC2Q7Z304 686 aaPredicted RBP6.98□□□□□ -1.29
PRPF40A-208ENST00000472760 CPNE8Q86YQ8 564 aa6.98□□□□□ -1.29
PRPF40A-208ENST00000472760 MMP19Q99542 508 aa6.98□□□□□ -1.29
PRPF40A-208ENST00000472760 ADAMTS10Q9H324 1103 aa6.98□□□□□ -1.29
PRPF40A-208ENST00000472760 TNFRSF10DQ9UBN6 386 aa6.98□□□□□ -1.29
PRPF40A-208ENST00000472760 TMEFF2Q9UIK5 374 aaPredicted RBP6.98□□□□□ -1.29
PRPF40A-208ENST00000472760 PLAAQ9Y263 795 aa6.98□□□□□ -1.29
PRPF40A-208ENST00000472760 AQP7O14520 342 aa6.97□□□□□ -1.29
PRPF40A-208ENST00000472760 DALRD3Q5D0E6 543 aaKnown RBP6.97□□□□□ -1.29
PRPF40A-208ENST00000472760 RALGPS1Q5JS13 557 aa6.97□□□□□ -1.29
PRPF40A-208ENST00000472760 RNF187Q5TA31 235 aaPredicted RBP6.97□□□□□ -1.29
PRPF40A-208ENST00000472760 STYK1Q6J9G0 422 aa6.97□□□□□ -1.29
PRPF40A-208ENST00000472760 KCNT2Q6UVM3 1135 aa6.97□□□□□ -1.29
PRPF40A-208ENST00000472760 JAMLQ86YT9 394 aa6.97□□□□□ -1.29
PRPF40A-208ENST00000472760 WFDC3Q8IUB2 231 aa6.97□□□□□ -1.29
PRPF40A-208ENST00000472760 TP53INP2Q8IXH6 220 aa6.97□□□□□ -1.29
PRPF40A-208ENST00000472760 TMEM52Q8NDY8 209 aa6.97□□□□□ -1.29
PRPF40A-208ENST00000472760 PI4K2BQ8TCG2 481 aa6.97□□□□□ -1.29
PRPF40A-208ENST00000472760 NINJ1Q92982 152 aa6.97□□□□□ -1.29
PRPF40A-208ENST00000472760 CCDC120Q96HB5 630 aa6.97□□□□□ -1.29
PRPF40A-208ENST00000472760 MAP6Q96JE9 813 aa6.97□□□□□ -1.29
PRPF40A-208ENST00000472760 CLUHP3Q96NS8 147 aa6.97□□□□□ -1.29
PRPF40A-208ENST00000472760 PHF20Q9BVI0 1012 aa6.97□□□□□ -1.29
PRPF40A-208ENST00000472760 PAK6Q9NQU5 681 aaPredicted RBP6.97□□□□□ -1.29
PRPF40A-208ENST00000472760 PRDM7Q9NQW5 492 aa6.97□□□□□ -1.29
PRPF40A-208ENST00000472760 TMEM59LQ9UK28 342 aa6.97□□□□□ -1.29
PRPF40A-208ENST00000472760 TRAF6Q9Y4K3 522 aa6.97□□□□□ -1.29
PRPF40A-208ENST00000472760 ZGLP1P0C6A0 271 aa6.96□□□□□ -1.3
PRPF40A-208ENST00000472760 NCLP19338 710 aaKnown RBP6.96□□□□□ -1.3
PRPF40A-208ENST00000472760 FUT4P22083 530 aa6.96□□□□□ -1.3
PRPF40A-208ENST00000472760 HK2P52789 917 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms