RNA–Protein interactions for RNA: ENST00000472442.2

SCAMP4-207, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-207ENST00000472442 HSP90B2PQ58FF3 399 aa14.89□□□□□ -0.03
SCAMP4-207ENST00000472442 ICE2Q659A1 982 aa14.89□□□□□ -0.03
SCAMP4-207ENST00000472442 EIF3CQ99613 913 aaKnown RBP14.89□□□□□ -0.03
SCAMP4-207ENST00000472442 ZNF219Q9P2Y4 722 aaPredicted RBP14.89□□□□□ -0.03
SCAMP4-207ENST00000472442 TEX33O43247 280 aa14.88□□□□□ -0.03
SCAMP4-207ENST00000472442 MAGEA9P43362 315 aa14.88□□□□□ -0.03
SCAMP4-207ENST00000472442 GTF2A1P52655 376 aaPredicted RBP14.88□□□□□ -0.03
SCAMP4-207ENST00000472442 GABPAQ06546 454 aa14.88□□□□□ -0.03
SCAMP4-207ENST00000472442 NR1I3Q14994 352 aa14.88□□□□□ -0.03
SCAMP4-207ENST00000472442 TTC31Q49AM3 519 aaPredicted RBP14.88□□□□□ -0.03
SCAMP4-207ENST00000472442 APOBEC3HQ6NTF7 200 aaKnown RBP14.88□□□□□ -0.03
SCAMP4-207ENST00000472442 GRAMD1CQ8IYS0 662 aa14.88□□□□□ -0.03
SCAMP4-207ENST00000472442 PDGFDQ9GZP0 370 aaPredicted RBP14.88□□□□□ -0.03
SCAMP4-207ENST00000472442 TMX4Q9H1E5 349 aaPredicted RBP14.88□□□□□ -0.03
SCAMP4-207ENST00000472442 MTMR7Q9Y216 660 aa14.88□□□□□ -0.03
SCAMP4-207ENST00000472442 PALM3A6NDB9 673 aaPredicted RBP14.88□□□□□ -0.03
SCAMP4-207ENST00000472442 PODNQ7Z5L7 613 aa14.88□□□□□ -0.03
SCAMP4-207ENST00000472442 CEP95Q96GE4 821 aa14.88□□□□□ -0.03
SCAMP4-207ENST00000472442 PANX2Q96RD6 677 aa14.88□□□□□ -0.03
SCAMP4-207ENST00000472442 PLEKHA4Q9H4M7 779 aa14.88□□□□□ -0.03
SCAMP4-207ENST00000472442 NOVP48745 357 aa14.88□□□□□ -0.03
SCAMP4-207ENST00000472442 RBL2Q08999 1139 aa14.88□□□□□ -0.03
SCAMP4-207ENST00000472442 TYW1BQ6NUM6 668 aa14.88□□□□□ -0.03
SCAMP4-207ENST00000472442 SLC35F6Q8N357 371 aa14.88□□□□□ -0.03
SCAMP4-207ENST00000472442 MSL3Q8N5Y2 521 aaKnown RBP14.88□□□□□ -0.03
SCAMP4-207ENST00000472442 MLKLQ8NB16 471 aa14.88□□□□□ -0.03
SCAMP4-207ENST00000472442 C7orf43Q8WVR3 580 aa14.88□□□□□ -0.03
SCAMP4-207ENST00000472442 USP40Q9NVE5 1235 aa14.88□□□□□ -0.03
SCAMP4-207ENST00000472442 HOOK1Q9UJC3 728 aaKnown RBP14.88□□□□□ -0.03
SCAMP4-207ENST00000472442 SRPRBQ9Y5M8 271 aaKnown RBP14.88□□□□□ -0.03
SCAMP4-207ENST00000472442 CTAGE9A4FU28 777 aa14.87□□□□□ -0.03
SCAMP4-207ENST00000472442 CDC42EP5Q6NZY7 148 aa14.87□□□□□ -0.03
SCAMP4-207ENST00000472442 LRRC31Q6UY01 552 aa14.87□□□□□ -0.03
SCAMP4-207ENST00000472442 FAM71BQ8TC56 605 aa14.87□□□□□ -0.03
SCAMP4-207ENST00000472442 GPKOWQ92917 476 aaPredicted RBP eCLIP14.87□□□□□ -0.03
SCAMP4-207ENST00000472442 SERTAD1Q9UHV2 236 aa14.87□□□□□ -0.03
SCAMP4-207ENST00000472442 DACH1Q9UI36 760 aa14.87□□□□□ -0.03
SCAMP4-207ENST00000472442 SCN9AQ15858 1988 aa14.87□□□□□ -0.03
SCAMP4-207ENST00000472442 A0A1B0GTH6 734 aa14.87□□□□□ -0.03
SCAMP4-207ENST00000472442 G3V3G9 751 aa14.87□□□□□ -0.03
SCAMP4-207ENST00000472442 GOLGA8HP0CJ92 632 aa14.87□□□□□ -0.03
SCAMP4-207ENST00000472442 DCAF8Q5TAQ9 597 aa14.87□□□□□ -0.03
SCAMP4-207ENST00000472442 HHIPL2Q6UWX4 724 aa14.87□□□□□ -0.03
SCAMP4-207ENST00000472442 IGSF22Q8N9C0 903 aa14.87□□□□□ -0.03
SCAMP4-207ENST00000472442 PCDHAC2Q9Y5I4 1007 aa14.87□□□□□ -0.03
SCAMP4-207ENST00000472442 TRIM75PA6NK02 468 aa14.86□□□□□ -0.03
SCAMP4-207ENST00000472442 LRRIQ3A6PVS8 624 aaPredicted RBP14.86□□□□□ -0.03
SCAMP4-207ENST00000472442 POLR2DO15514 142 aaKnown RBP14.86□□□□□ -0.03
SCAMP4-207ENST00000472442 NLRP5P59047 1200 aa14.86□□□□□ -0.03
SCAMP4-207ENST00000472442 MORC3Q14149 939 aa14.86□□□□□ -0.03
SCAMP4-207ENST00000472442 USP49Q70CQ1 688 aa14.86□□□□□ -0.03
SCAMP4-207ENST00000472442 PPFIBP1Q86W92 1011 aa14.86□□□□□ -0.03
SCAMP4-207ENST00000472442 CPVLQ9H3G5 476 aa14.86□□□□□ -0.03
SCAMP4-207ENST00000472442 FAM204AQ9H8W3 233 aa14.86□□□□□ -0.03
SCAMP4-207ENST00000472442 CTAGE15A4D2H0 777 aa14.86□□□□□ -0.03
SCAMP4-207ENST00000472442 CTAGE8P0CG41 777 aa14.86□□□□□ -0.03
SCAMP4-207ENST00000472442 CTAGE6Q86UF2 777 aa14.86□□□□□ -0.03
SCAMP4-207ENST00000472442 CTAGE4Q8IX94 777 aa14.86□□□□□ -0.03
SCAMP4-207ENST00000472442 ZNF579Q8NAF0 562 aaKnown RBP14.86□□□□□ -0.03
SCAMP4-207ENST00000472442 BRMS1Q9HCU9 246 aa14.86□□□□□ -0.03
SCAMP4-207ENST00000472442 CEP131Q9UPN4 1083 aa14.86□□□□□ -0.03
SCAMP4-207ENST00000472442 ABL1P00519 1130 aa14.85□□□□□ -0.03
SCAMP4-207ENST00000472442 NFIAQ12857 509 aa14.85□□□□□ -0.03
SCAMP4-207ENST00000472442 NOA1Q8NC60 698 aaKnown RBP14.85□□□□□ -0.03
SCAMP4-207ENST00000472442 ACRBPQ8NEB7 543 aa14.85□□□□□ -0.03
SCAMP4-207ENST00000472442 TEKT1Q969V4 418 aa14.85□□□□□ -0.03
SCAMP4-207ENST00000472442 CSRNP2Q9H175 543 aa14.85□□□□□ -0.03
SCAMP4-207ENST00000472442 STK32BQ9NY57 414 aa14.85□□□□□ -0.03
SCAMP4-207ENST00000472442 ZNF646O15015 1829 aaPredicted RBP14.85□□□□□ -0.03
SCAMP4-207ENST00000472442 SLURP2P0DP57 97 aa14.85□□□□□ -0.03
SCAMP4-207ENST00000472442 CRKP46108 304 aa14.85□□□□□ -0.03
SCAMP4-207ENST00000472442 GNAQP50148 359 aa14.85□□□□□ -0.03
SCAMP4-207ENST00000472442 DACT2Q5SW24 774 aa14.85□□□□□ -0.03
SCAMP4-207ENST00000472442 NAA15Q9BXJ9 866 aaKnown RBP14.85□□□□□ -0.03
SCAMP4-207ENST00000472442 GBP3Q9H0R5 595 aa14.85□□□□□ -0.03
SCAMP4-207ENST00000472442 JRKLQ9Y4A0 524 aa14.85□□□□□ -0.03
SCAMP4-207ENST00000472442 ECE2O60344 883 aa14.85□□□□□ -0.03
SCAMP4-207ENST00000472442 SARSP49591 514 aaKnown RBP14.85□□□□□ -0.03
SCAMP4-207ENST00000472442 ZNF174Q15697 407 aa14.85□□□□□ -0.03
SCAMP4-207ENST00000472442 NT5DC1Q5TFE4 455 aa14.85□□□□□ -0.03
SCAMP4-207ENST00000472442 USP17L2Q6R6M4 530 aa14.85□□□□□ -0.03
SCAMP4-207ENST00000472442 PIK3AP1Q6ZUJ8 805 aa14.85□□□□□ -0.03
SCAMP4-207ENST00000472442 KIAA0825Q8IV33 1275 aa14.85□□□□□ -0.03
SCAMP4-207ENST00000472442 ZFPM1Q8IX07 1006 aa14.85□□□□□ -0.03
SCAMP4-207ENST00000472442 KLRF2D3W0D1 207 aa14.84□□□□□ -0.03
SCAMP4-207ENST00000472442 MFAP3LO75121 409 aa14.84□□□□□ -0.03
SCAMP4-207ENST00000472442 AKR1B1P15121 316 aa14.84□□□□□ -0.03
SCAMP4-207ENST00000472442 CORO7P57737 925 aa14.84□□□□□ -0.03
SCAMP4-207ENST00000472442 STRIP1Q5VSL9 837 aa14.84□□□□□ -0.03
SCAMP4-207ENST00000472442 APTXQ7Z2E3 356 aaKnown RBP14.84□□□□□ -0.03
SCAMP4-207ENST00000472442 CNKSR1Q969H4 720 aa14.84□□□□□ -0.03
SCAMP4-207ENST00000472442 NAPGQ99747 312 aaPredicted RBP14.84□□□□□ -0.03
SCAMP4-207ENST00000472442 SH3GLB2Q9NR46 395 aa14.84□□□□□ -0.03
SCAMP4-207ENST00000472442 PLIN4Q96Q06 1357 aa14.84□□□□□ -0.03
SCAMP4-207ENST00000472442 M0R2N6 131 aa14.84□□□□□ -0.03
SCAMP4-207ENST00000472442 CASP14P31944 242 aa14.84□□□□□ -0.03
SCAMP4-207ENST00000472442 STX17P56962 302 aa14.84□□□□□ -0.03
SCAMP4-207ENST00000472442 TUBB2AQ13885 445 aa14.84□□□□□ -0.03
SCAMP4-207ENST00000472442 TTC38Q5R3I4 469 aa14.84□□□□□ -0.03
SCAMP4-207ENST00000472442 KLHL10Q6JEL2 608 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms