RNA–Protein interactions for RNA: ENST00000471739.1

FYCO1-204, Transcript of FYVE and coiled-coil domain containing 1, humanhuman

TSL 4

Gene FYCO1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FYCO1-204ENST00000471739 TBX21Q9UL17 535 aa14.43□□□□□ -0.1
FYCO1-204ENST00000471739 CCPG1Q9ULG6 757 aa14.43□□□□□ -0.1
FYCO1-204ENST00000471739 MTMR7Q9Y216 660 aa14.43□□□□□ -0.1
FYCO1-204ENST00000471739 CTAGE5O15320 804 aa14.42□□□□□ -0.1
FYCO1-204ENST00000471739 TIMP1P01033 207 aa14.42□□□□□ -0.1
FYCO1-204ENST00000471739 ICAM1P05362 532 aa14.42□□□□□ -0.1
FYCO1-204ENST00000471739 HSPD1P10809 573 aaKnown RBP14.42□□□□□ -0.1
FYCO1-204ENST00000471739 NMIQ13287 307 aaPredicted RBP14.42□□□□□ -0.1
FYCO1-204ENST00000471739 MUM1L1Q5H9M0 696 aa14.42□□□□□ -0.1
FYCO1-204ENST00000471739 RRP12Q5JTH9 1297 aaKnown RBP14.42□□□□□ -0.1
FYCO1-204ENST00000471739 BTNL9Q6UXG8 535 aa14.42□□□□□ -0.1
FYCO1-204ENST00000471739 NOL8Q76FK4 1167 aaKnown RBP14.42□□□□□ -0.1
FYCO1-204ENST00000471739 ZNF589Q86UQ0 364 aaPredicted RBP14.42□□□□□ -0.1
FYCO1-204ENST00000471739 TMEM47Q9BQJ4 181 aa14.42□□□□□ -0.1
FYCO1-204ENST00000471739 LNPKQ9C0E8 428 aa14.42□□□□□ -0.1
FYCO1-204ENST00000471739 RANBP17Q9H2T7 1088 aaKnown RBP14.42□□□□□ -0.1
FYCO1-204ENST00000471739 PRUNE2Q8WUY3 3088 aa14.42□□□□□ -0.1
FYCO1-204ENST00000471739 ASTN1O14525 1302 aa14.41□□□□□ -0.1
FYCO1-204ENST00000471739 CCDC171Q6TFL3 1326 aa14.41□□□□□ -0.1
FYCO1-204ENST00000471739 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.41□□□□□ -0.1
FYCO1-204ENST00000471739 TRIM6-TRIM34B2RNG4 842 aa14.41□□□□□ -0.1
FYCO1-204ENST00000471739 ARVCFO00192 962 aa14.41□□□□□ -0.1
FYCO1-204ENST00000471739 PCP11498 1178 aaKnown RBP14.41□□□□□ -0.1
FYCO1-204ENST00000471739 SYDE2Q5VT97 1194 aa14.41□□□□□ -0.1
FYCO1-204ENST00000471739 NSMFQ6X4W1 530 aa14.41□□□□□ -0.1
FYCO1-204ENST00000471739 SMC5Q8IY18 1101 aa14.41□□□□□ -0.1
FYCO1-204ENST00000471739 SEMA6BQ9H3T3 888 aa14.41□□□□□ -0.1
FYCO1-204ENST00000471739 GNEQ9Y223 722 aaKnown RBP14.41□□□□□ -0.1
FYCO1-204ENST00000471739 CDH23Q9H251 3354 aa14.4□□□□□ -0.1
FYCO1-204ENST00000471739 EYSQ5T1H1 3165 aa14.4□□□□□ -0.1
FYCO1-204ENST00000471739 TLR3O15455 904 aaKnown RBP14.4□□□□□ -0.1
FYCO1-204ENST00000471739 CABYRO75952 493 aa14.4□□□□□ -0.1
FYCO1-204ENST00000471739 SLC16A2P36021 539 aa14.4□□□□□ -0.1
FYCO1-204ENST00000471739 MFAP1P55081 439 aaKnown RBP14.4□□□□□ -0.1
FYCO1-204ENST00000471739 HAND2P61296 217 aa14.4□□□□□ -0.1
FYCO1-204ENST00000471739 BEX3Q00994 111 aa14.4□□□□□ -0.1
FYCO1-204ENST00000471739 FSCN1Q16658 493 aaKnown RBP14.4□□□□□ -0.1
FYCO1-204ENST00000471739 AKNAD1Q5T1N1 836 aa14.4□□□□□ -0.1
FYCO1-204ENST00000471739 TTBK2Q6IQ55 1244 aa14.4□□□□□ -0.1
FYCO1-204ENST00000471739 MFSD5Q6N075 450 aa14.4□□□□□ -0.1
FYCO1-204ENST00000471739 TLK2Q86UE8 772 aa14.4□□□□□ -0.1
FYCO1-204ENST00000471739 MORC4Q8TE76 937 aa14.4□□□□□ -0.1
FYCO1-204ENST00000471739 CDX2Q99626 313 aaPredicted RBP14.4□□□□□ -0.1
FYCO1-204ENST00000471739 AP5M1Q9H0R1 490 aa14.4□□□□□ -0.1
FYCO1-204ENST00000471739 RWDD1Q9H446 243 aaPredicted RBP14.4□□□□□ -0.1
FYCO1-204ENST00000471739 VTA1Q9NP79 307 aa14.4□□□□□ -0.1
FYCO1-204ENST00000471739 TTC28Q96AY4 2481 aa14.39□□□□□ -0.11
FYCO1-204ENST00000471739 TMEM265A0A087WTH1 108 aa14.39□□□□□ -0.11
FYCO1-204ENST00000471739 SMPD1P17405 629 aa14.39□□□□□ -0.11
FYCO1-204ENST00000471739 IQSEC1Q6DN90 963 aa14.39□□□□□ -0.11
FYCO1-204ENST00000471739 MFSD6Q6ZSS7 791 aa14.39□□□□□ -0.11
FYCO1-204ENST00000471739 EEPD1Q7L9B9 569 aa14.39□□□□□ -0.11
FYCO1-204ENST00000471739 FBXO16Q8IX29 292 aaPredicted RBP14.39□□□□□ -0.11
FYCO1-204ENST00000471739 FAM126BQ8IXS8 530 aa14.39□□□□□ -0.11
FYCO1-204ENST00000471739 RILPL2Q969X0 211 aa14.39□□□□□ -0.11
FYCO1-204ENST00000471739 TTC14Q96N46 770 aa14.39□□□□□ -0.11
FYCO1-204ENST00000471739 TTYH1Q9H313 450 aaPredicted RBP14.39□□□□□ -0.11
FYCO1-204ENST00000471739 RNF41Q9H4P4 317 aaPredicted RBP14.39□□□□□ -0.11
FYCO1-204ENST00000471739 GPCPD1Q9NPB8 672 aa14.39□□□□□ -0.11
FYCO1-204ENST00000471739 ADD3Q9UEY8 706 aaKnown RBP14.39□□□□□ -0.11
FYCO1-204ENST00000471739 PNMA2Q9UL42 364 aa14.39□□□□□ -0.11
FYCO1-204ENST00000471739 Q9Y3F1 56 aa14.39□□□□□ -0.11
FYCO1-204ENST00000471739 DDX49Q9Y6V7 483 aaKnown RBP14.39□□□□□ -0.11
FYCO1-204ENST00000471739 FRMPD2Q68DX3 1309 aaPredicted RBP14.39□□□□□ -0.11
FYCO1-204ENST00000471739 LOC102724159A0A0B4J2E5 919 aa14.38□□□□□ -0.11
FYCO1-204ENST00000471739 DYNC1LI2O43237 492 aaPredicted RBP14.38□□□□□ -0.11
FYCO1-204ENST00000471739 ZEB2O60315 1214 aa14.38□□□□□ -0.11
FYCO1-204ENST00000471739 PDHBP11177 359 aa14.38□□□□□ -0.11
FYCO1-204ENST00000471739 PPIGQ13427 754 aaKnown RBP eCLIP14.38□□□□□ -0.11
FYCO1-204ENST00000471739 BAATQ14032 418 aaPredicted RBP14.38□□□□□ -0.11
FYCO1-204ENST00000471739 PWP2Q15269 919 aaKnown RBP14.38□□□□□ -0.11
FYCO1-204ENST00000471739 B4GALNT3Q6L9W6 998 aa14.38□□□□□ -0.11
FYCO1-204ENST00000471739 TAPT1Q6NXT6 567 aa14.38□□□□□ -0.11
FYCO1-204ENST00000471739 CXCL17Q6UXB2 119 aa14.38□□□□□ -0.11
FYCO1-204ENST00000471739 CHD1LQ86WJ1 897 aa14.38□□□□□ -0.11
FYCO1-204ENST00000471739 TBC1D10CQ8IV04 446 aa14.38□□□□□ -0.11
FYCO1-204ENST00000471739 SLC43A3Q8NBI5 491 aa14.38□□□□□ -0.11
FYCO1-204ENST00000471739 PURBQ96QR8 312 aaKnown RBP14.38□□□□□ -0.11
FYCO1-204ENST00000471739 SEZ6LQ9BYH1 1024 aa14.38□□□□□ -0.11
FYCO1-204ENST00000471739 PDGFCQ9NRA1 345 aa14.38□□□□□ -0.11
FYCO1-204ENST00000471739 CHD9Q3L8U1 2897 aa14.38□□□□□ -0.11
FYCO1-204ENST00000471739 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.37□□□□□ -0.11
FYCO1-204ENST00000471739 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.37□□□□□ -0.11
FYCO1-204ENST00000471739 PTPDC1A2A3K4 754 aa14.37□□□□□ -0.11
FYCO1-204ENST00000471739 NFIBO00712 420 aa14.37□□□□□ -0.11
FYCO1-204ENST00000471739 CD4P01730 458 aa14.37□□□□□ -0.11
FYCO1-204ENST00000471739 SNHG28P0DPA3 235 aa14.37□□□□□ -0.11
FYCO1-204ENST00000471739 SDSP20132 328 aa14.37□□□□□ -0.11
FYCO1-204ENST00000471739 NT5C2P49902 561 aa14.37□□□□□ -0.11
FYCO1-204ENST00000471739 ALDH5A1P51649 535 aaPredicted RBP14.37□□□□□ -0.11
FYCO1-204ENST00000471739 NUCB1Q02818 461 aa14.37□□□□□ -0.11
FYCO1-204ENST00000471739 ZNF543Q08ER8 600 aa14.37□□□□□ -0.11
FYCO1-204ENST00000471739 PLEKHM2Q8IWE5 1019 aa14.37□□□□□ -0.11
FYCO1-204ENST00000471739 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.37□□□□□ -0.11
FYCO1-204ENST00000471739 TMEM199Q8N511 208 aa14.37□□□□□ -0.11
FYCO1-204ENST00000471739 ESR2Q92731 530 aa14.37□□□□□ -0.11
FYCO1-204ENST00000471739 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.37□□□□□ -0.11
FYCO1-204ENST00000471739 OSBPL3Q9H4L5 887 aa14.37□□□□□ -0.11
FYCO1-204ENST00000471739 LRRC37A2A6NM11 1700 aa14.37□□□□□ -0.11
FYCO1-204ENST00000471739 CSF2RAP15509 400 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms