RNA–Protein interactions for RNA: ENST00000471697.1

SCN3A-207, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 4

Gene SCN3A, Length 555 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-207ENST00000471697 SMAD7O15105 426 aaKnown RBP4.08□□□□□ -1.76
SCN3A-207ENST00000471697 RAPGEF3O95398 923 aa4.08□□□□□ -1.76
SCN3A-207ENST00000471697 F2P00734 622 aa4.08□□□□□ -1.76
SCN3A-207ENST00000471697 GOLGA6DP0CG33 693 aa4.08□□□□□ -1.76
SCN3A-207ENST00000471697 TRIM27P14373 513 aa4.08□□□□□ -1.76
SCN3A-207ENST00000471697 SOX5P35711 763 aa4.08□□□□□ -1.76
SCN3A-207ENST00000471697 GUCY2FP51841 1108 aa4.08□□□□□ -1.76
SCN3A-207ENST00000471697 NEK2P51955 445 aa4.08□□□□□ -1.76
SCN3A-207ENST00000471697 MLC1Q15049 377 aa4.08□□□□□ -1.76
SCN3A-207ENST00000471697 DDR2Q16832 855 aa4.08□□□□□ -1.76
SCN3A-207ENST00000471697 SPATS1Q496A3 300 aa4.08□□□□□ -1.76
SCN3A-207ENST00000471697 SLC4A10Q6U841 1118 aa4.08□□□□□ -1.76
SCN3A-207ENST00000471697 HDGFL2Q7Z4V5 671 aaPredicted RBP4.08□□□□□ -1.76
SCN3A-207ENST00000471697 DGKHQ86XP1 1220 aa4.08□□□□□ -1.76
SCN3A-207ENST00000471697 NGDNQ8NEJ9 315 aaKnown RBP4.08□□□□□ -1.76
SCN3A-207ENST00000471697 EPS8L3Q8TE67 593 aaKnown RBP4.08□□□□□ -1.76
SCN3A-207ENST00000471697 IPO4Q8TEX9 1081 aaKnown RBP4.08□□□□□ -1.76
SCN3A-207ENST00000471697 CPLX3Q8WVH0 158 aa4.08□□□□□ -1.76
SCN3A-207ENST00000471697 NINJ1Q92982 152 aa4.08□□□□□ -1.76
SCN3A-207ENST00000471697 ANAPC16Q96DE5 110 aa4.08□□□□□ -1.76
SCN3A-207ENST00000471697 MFSD3Q96ES6 412 aa4.08□□□□□ -1.76
SCN3A-207ENST00000471697 WDR89Q96FK6 387 aaPredicted RBP4.08□□□□□ -1.76
SCN3A-207ENST00000471697 SHDQ96IW2 340 aa4.08□□□□□ -1.76
SCN3A-207ENST00000471697 ASPSCR1Q9BZE9 553 aa4.08□□□□□ -1.76
SCN3A-207ENST00000471697 LIN7BQ9HAP6 207 aa4.08□□□□□ -1.76
SCN3A-207ENST00000471697 NPHS2Q9NP85 383 aa4.08□□□□□ -1.76
SCN3A-207ENST00000471697 SEMA3GQ9NS98 782 aa4.08□□□□□ -1.76
SCN3A-207ENST00000471697 GOLGA6AQ9NYA3 693 aa4.08□□□□□ -1.76
SCN3A-207ENST00000471697 FRMD4BQ9Y2L6 1034 aa4.08□□□□□ -1.76
SCN3A-207ENST00000471697 KLRG2A4D1S0 409 aaPredicted RBP4.07□□□□□ -1.76
SCN3A-207ENST00000471697 TCERG1O14776 1098 aaKnown RBP4.07□□□□□ -1.76
SCN3A-207ENST00000471697 SLC26A4O43511 780 aa4.07□□□□□ -1.76
SCN3A-207ENST00000471697 ZNF862O60290 1169 aa4.07□□□□□ -1.76
SCN3A-207ENST00000471697 CPNE3O75131 537 aaKnown RBP4.07□□□□□ -1.76
SCN3A-207ENST00000471697 SEMA7AO75326 666 aa4.07□□□□□ -1.76
SCN3A-207ENST00000471697 TCEA3O75764 348 aa4.07□□□□□ -1.76
SCN3A-207ENST00000471697 IFIT2P09913 472 aaKnown RBP4.07□□□□□ -1.76
SCN3A-207ENST00000471697 SRGNP10124 158 aa4.07□□□□□ -1.76
SCN3A-207ENST00000471697 MYCLP1P12525 358 aaPredicted RBP4.07□□□□□ -1.76
SCN3A-207ENST00000471697 EIF4A3P38919 411 aaKnown RBP4.07□□□□□ -1.76
SCN3A-207ENST00000471697 DLG4P78352 724 aa4.07□□□□□ -1.76
SCN3A-207ENST00000471697 PWP1Q13610 501 aa4.07□□□□□ -1.76
SCN3A-207ENST00000471697 CCDC96Q2M329 555 aa4.07□□□□□ -1.76
SCN3A-207ENST00000471697 GFOD2Q3B7J2 385 aa4.07□□□□□ -1.76
SCN3A-207ENST00000471697 FAM102BQ5T8I3 360 aa4.07□□□□□ -1.76
SCN3A-207ENST00000471697 KIAA0319Q5VV43 1072 aa4.07□□□□□ -1.76
SCN3A-207ENST00000471697 PCNX4Q63HM2 1172 aa4.07□□□□□ -1.76
SCN3A-207ENST00000471697 PI16Q6UXB8 463 aa4.07□□□□□ -1.76
SCN3A-207ENST00000471697 KRT77Q7Z794 578 aa4.07□□□□□ -1.76
SCN3A-207ENST00000471697 RNF180Q86T96 592 aa4.07□□□□□ -1.76
SCN3A-207ENST00000471697 CREBRFQ8IUR6 639 aa4.07□□□□□ -1.76
SCN3A-207ENST00000471697 RELL1Q8IUW5 271 aa4.07□□□□□ -1.76
SCN3A-207ENST00000471697 TMEM151BQ8IW70 566 aa4.07□□□□□ -1.76
SCN3A-207ENST00000471697 ZNF296Q8WUU4 475 aaPredicted RBP4.07□□□□□ -1.76
SCN3A-207ENST00000471697 CCDC74AQ96AQ1 378 aa4.07□□□□□ -1.76
SCN3A-207ENST00000471697 ERP27Q96DN0 273 aa4.07□□□□□ -1.76
SCN3A-207ENST00000471697 TTC14Q96N46 770 aa4.07□□□□□ -1.76
SCN3A-207ENST00000471697 SRRTQ9BXP5 876 aaKnown RBP4.07□□□□□ -1.76
SCN3A-207ENST00000471697 ZNF576Q9H609 170 aa4.07□□□□□ -1.76
SCN3A-207ENST00000471697 CCDC86Q9H6F5 360 aaKnown RBP4.07□□□□□ -1.76
SCN3A-207ENST00000471697 KCNQ5Q9NR82 932 aa4.07□□□□□ -1.76
SCN3A-207ENST00000471697 KRT82Q9NSB4 513 aa4.07□□□□□ -1.76
SCN3A-207ENST00000471697 CLIC5Q9NZA1 410 aa4.07□□□□□ -1.76
SCN3A-207ENST00000471697 LUZP4Q9P127 313 aa4.07□□□□□ -1.76
SCN3A-207ENST00000471697 POLG2Q9UHN1 485 aa4.07□□□□□ -1.76
SCN3A-207ENST00000471697 NOL7Q9UMY1 257 aaKnown RBP4.07□□□□□ -1.76
SCN3A-207ENST00000471697 GTF2A1LQ9UNN4 478 aa4.07□□□□□ -1.76
SCN3A-207ENST00000471697 MYRFQ9Y2G1 1151 aa4.07□□□□□ -1.76
SCN3A-207ENST00000471697 PTCH2Q9Y6C5 1203 aa4.07□□□□□ -1.76
SCN3A-207ENST00000471697 PHLDB1Q86UU1 1377 aa4.06□□□□□ -1.76
SCN3A-207ENST00000471697 KDM2BQ8NHM5 1336 aa4.06□□□□□ -1.76
SCN3A-207ENST00000471697 GREM1O60565 184 aa4.06□□□□□ -1.76
SCN3A-207ENST00000471697 PEX10O60683 326 aa4.06□□□□□ -1.76
SCN3A-207ENST00000471697 RNGTTO60942 597 aaKnown RBP4.06□□□□□ -1.76
SCN3A-207ENST00000471697 RFPL1O75677 317 aa4.06□□□□□ -1.76
SCN3A-207ENST00000471697 RNASEH2AO75792 299 aaKnown RBP4.06□□□□□ -1.76
SCN3A-207ENST00000471697 EYA4O95677 639 aa4.06□□□□□ -1.76
SCN3A-207ENST00000471697 USP17L7P0C7H9 530 aa4.06□□□□□ -1.76
SCN3A-207ENST00000471697 RAC2P15153 192 aa4.06□□□□□ -1.76
SCN3A-207ENST00000471697 HNRNPUQ00839 825 aaKnown RBP eCLIP4.06□□□□□ -1.76
SCN3A-207ENST00000471697 CCDC93Q567U6 631 aa4.06□□□□□ -1.76
SCN3A-207ENST00000471697 ZNF385BQ569K4 471 aa4.06□□□□□ -1.76
SCN3A-207ENST00000471697 FTSJ3Q8IY81 847 aaKnown RBP4.06□□□□□ -1.76
SCN3A-207ENST00000471697 NIM1KQ8IY84 436 aa4.06□□□□□ -1.76
SCN3A-207ENST00000471697 CPXCR1Q8N123 301 aa4.06□□□□□ -1.76
SCN3A-207ENST00000471697 AFAP1L2Q8N4X5 818 aa4.06□□□□□ -1.76
SCN3A-207ENST00000471697 MAGEB6Q8N7X4 407 aa4.06□□□□□ -1.76
SCN3A-207ENST00000471697 ATXN2LQ8WWM7 1075 aaKnown RBP4.06□□□□□ -1.76
SCN3A-207ENST00000471697 ISL2Q96A47 359 aa4.06□□□□□ -1.76
SCN3A-207ENST00000471697 TRMT2BQ96GJ1 504 aaKnown RBP4.06□□□□□ -1.76
SCN3A-207ENST00000471697 ALPK1Q96QP1 1244 aa4.06□□□□□ -1.76
SCN3A-207ENST00000471697 HERPUD2Q9BSE4 406 aa4.06□□□□□ -1.76
SCN3A-207ENST00000471697 RTFDC1Q9BY42 306 aaPredicted RBP4.06□□□□□ -1.76
SCN3A-207ENST00000471697 SRCIN1Q9C0H9 1055 aa4.06□□□□□ -1.76
SCN3A-207ENST00000471697 EHD4Q9H223 541 aa4.06□□□□□ -1.76
SCN3A-207ENST00000471697 ST7Q9NRC1 585 aa4.06□□□□□ -1.76
SCN3A-207ENST00000471697 ASAP1Q9ULH1 1129 aa4.06□□□□□ -1.76
SCN3A-207ENST00000471697 DAAM1Q9Y4D1 1078 aa4.06□□□□□ -1.76
SCN3A-207ENST00000471697 GNAT3A8MTJ3 354 aa4.05□□□□□ -1.76
SCN3A-207ENST00000471697 CLGNO14967 610 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms