RNA–Protein interactions for RNA: ENST00000471572.6

NF1-208, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 2,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-208ENST00000471572 CCDC184Q52MB2 194 aa7.56□□□□□ -1.2
NF1-208ENST00000471572 PGM2L1Q6PCE3 622 aa7.56□□□□□ -1.2
NF1-208ENST00000471572 IGF2-ASQ6U949 168 aa7.56□□□□□ -1.2
NF1-208ENST00000471572 ZNF354CQ86Y25 554 aa7.56□□□□□ -1.2
NF1-208ENST00000471572 MCATQ8IVS2 390 aaKnown RBP7.56□□□□□ -1.2
NF1-208ENST00000471572 TNIP3Q96KP6 325 aa7.56□□□□□ -1.2
NF1-208ENST00000471572 DPH2Q9BQC3 489 aaPredicted RBP7.56□□□□□ -1.2
NF1-208ENST00000471572 SMOC1Q9H4F8 434 aa7.56□□□□□ -1.2
NF1-208ENST00000471572 PRDM6Q9NQX0 595 aa7.56□□□□□ -1.2
NF1-208ENST00000471572 THG1LQ9NWX6 298 aaKnown RBP7.56□□□□□ -1.2
NF1-208ENST00000471572 SOS2Q07890 1332 aaPredicted RBP7.56□□□□□ -1.2
NF1-208ENST00000471572 DYTNA2CJ06 578 aa7.55□□□□□ -1.2
NF1-208ENST00000471572 TPP1O14773 563 aa7.55□□□□□ -1.2
NF1-208ENST00000471572 RNASEH2AO75792 299 aaKnown RBP7.55□□□□□ -1.2
NF1-208ENST00000471572 HSP90AA1P07900 732 aaKnown RBP7.55□□□□□ -1.2
NF1-208ENST00000471572 CPB1P15086 417 aa7.55□□□□□ -1.2
NF1-208ENST00000471572 AK2P54819 239 aa7.55□□□□□ -1.2
NF1-208ENST00000471572 ETF1P62495 437 aaKnown RBP7.55□□□□□ -1.2
NF1-208ENST00000471572 MAP4K2Q12851 820 aa7.55□□□□□ -1.2
NF1-208ENST00000471572 DENND5AQ6IQ26 1287 aa7.55□□□□□ -1.2
NF1-208ENST00000471572 DDX54Q8TDD1 881 aaKnown RBP7.55□□□□□ -1.2
NF1-208ENST00000471572 CHTF18Q8WVB6 975 aa7.55□□□□□ -1.2
NF1-208ENST00000471572 AKT3Q9Y243 479 aa7.55□□□□□ -1.2
NF1-208ENST00000471572 WDR64B1ANS9 1081 aa7.54□□□□□ -1.2
NF1-208ENST00000471572 F5H423 210 aaPredicted RBP7.54□□□□□ -1.2
NF1-208ENST00000471572 IL33O95760 270 aa7.54□□□□□ -1.2
NF1-208ENST00000471572 LSSP48449 732 aa7.54□□□□□ -1.2
NF1-208ENST00000471572 KRT85P78386 507 aa7.54□□□□□ -1.2
NF1-208ENST00000471572 TBC1D8BQ0IIM8 1120 aa7.54□□□□□ -1.2
NF1-208ENST00000471572 MRPL14Q6P1L8 145 aaKnown RBP7.54□□□□□ -1.2
NF1-208ENST00000471572 KCNT2Q6UVM3 1135 aa7.54□□□□□ -1.2
NF1-208ENST00000471572 CCDC144CPQ8IYA2 1237 aa7.54□□□□□ -1.2
NF1-208ENST00000471572 CLASRPQ8N2M8 674 aaKnown RBP7.54□□□□□ -1.2
NF1-208ENST00000471572 IGSF22Q8N9C0 903 aa7.54□□□□□ -1.2
NF1-208ENST00000471572 BAHD1Q8TBE0 780 aaPredicted RBP7.54□□□□□ -1.2
NF1-208ENST00000471572 KCTD13Q8WZ19 329 aa7.54□□□□□ -1.2
NF1-208ENST00000471572 WNT10AQ9GZT5 417 aa7.54□□□□□ -1.2
NF1-208ENST00000471572 NMRK2Q9NPI5 230 aa7.54□□□□□ -1.2
NF1-208ENST00000471572 CYP26B1Q9NR63 512 aa7.54□□□□□ -1.2
NF1-208ENST00000471572 DISC1Q9NRI5 854 aa7.54□□□□□ -1.2
NF1-208ENST00000471572 CGGBP1Q9UFW8 167 aaPredicted RBP7.54□□□□□ -1.2
NF1-208ENST00000471572 PCDHGC5Q9Y5F6 944 aa7.54□□□□□ -1.2
NF1-208ENST00000471572 TNFRSF10AO00220 468 aa7.54□□□□□ -1.2
NF1-208ENST00000471572 NOP56O00567 594 aaKnown RBP7.54□□□□□ -1.2
NF1-208ENST00000471572 H2AFYO75367 372 aaKnown RBP7.54□□□□□ -1.2
NF1-208ENST00000471572 CLEC3AO75596 197 aa7.54□□□□□ -1.2
NF1-208ENST00000471572 KCNH1O95259 989 aa7.54□□□□□ -1.2
NF1-208ENST00000471572 ATP2A2P16615 1042 aaKnown RBP7.54□□□□□ -1.2
NF1-208ENST00000471572 CD247P20963 164 aa7.54□□□□□ -1.2
NF1-208ENST00000471572 MAOBP27338 520 aa7.54□□□□□ -1.2
NF1-208ENST00000471572 ZC3H12AQ5D1E8 599 aaKnown RBP7.54□□□□□ -1.2
NF1-208ENST00000471572 SLC35F1Q5T1Q4 408 aa7.54□□□□□ -1.2
NF1-208ENST00000471572 GTF2IRD2BQ6EKJ0 949 aa7.54□□□□□ -1.2
NF1-208ENST00000471572 STYK1Q6J9G0 422 aa7.54□□□□□ -1.2
NF1-208ENST00000471572 GTF2IRD2Q86UP8 949 aa7.54□□□□□ -1.2
NF1-208ENST00000471572 FAM35AQ86V20 835 aa7.54□□□□□ -1.2
NF1-208ENST00000471572 CYP4X1Q8N118 509 aa7.54□□□□□ -1.2
NF1-208ENST00000471572 FAM43AQ8N2R8 423 aa7.54□□□□□ -1.2
NF1-208ENST00000471572 SMARCC1Q92922 1105 aaPredicted RBP7.54□□□□□ -1.2
NF1-208ENST00000471572 MPP4Q96JB8 637 aa7.54□□□□□ -1.2
NF1-208ENST00000471572 TMEM87BQ96K49 555 aa7.54□□□□□ -1.2
NF1-208ENST00000471572 C1orf112Q9NSG2 853 aa7.54□□□□□ -1.2
NF1-208ENST00000471572 H2AFY2Q9P0M6 372 aaPredicted RBP7.54□□□□□ -1.2
NF1-208ENST00000471572 WHRNQ9P202 907 aa7.54□□□□□ -1.2
NF1-208ENST00000471572 HIF3AQ9Y2N7 669 aa7.54□□□□□ -1.2
NF1-208ENST00000471572 PCDHA8Q9Y5H6 950 aa7.54□□□□□ -1.2
NF1-208ENST00000471572 AP1G1O43747 822 aa7.53□□□□□ -1.2
NF1-208ENST00000471572 GDF9O60383 454 aa7.53□□□□□ -1.2
NF1-208ENST00000471572 CDC25BP30305 580 aa7.53□□□□□ -1.2
NF1-208ENST00000471572 NTF4P34130 210 aa7.53□□□□□ -1.2
NF1-208ENST00000471572 TM4SF4P48230 202 aa7.53□□□□□ -1.2
NF1-208ENST00000471572 YARSP54577 528 aaKnown RBP7.53□□□□□ -1.2
NF1-208ENST00000471572 RRP12Q5JTH9 1297 aaKnown RBP7.53□□□□□ -1.2
NF1-208ENST00000471572 CCDC174Q6PII3 467 aa7.53□□□□□ -1.2
NF1-208ENST00000471572 ARHGEF39Q8N4T4 335 aa7.53□□□□□ -1.2
NF1-208ENST00000471572 RCC1LQ96I51 464 aaKnown RBP7.53□□□□□ -1.2
NF1-208ENST00000471572 MYD88Q99836 296 aa7.53□□□□□ -1.2
NF1-208ENST00000471572 GBP3Q9H0R5 595 aa7.53□□□□□ -1.2
NF1-208ENST00000471572 SMG9Q9H0W8 520 aaKnown RBP7.53□□□□□ -1.2
NF1-208ENST00000471572 MKS1Q9NXB0 559 aa7.53□□□□□ -1.2
NF1-208ENST00000471572 DNMT3LQ9UJW3 386 aa7.53□□□□□ -1.2
NF1-208ENST00000471572 PPM1BO75688 479 aa7.52□□□□□ -1.2
NF1-208ENST00000471572 AGR2O95994 175 aa7.52□□□□□ -1.2
NF1-208ENST00000471572 GPSM2P81274 684 aa7.52□□□□□ -1.2
NF1-208ENST00000471572 TRIM14Q14142 442 aa7.52□□□□□ -1.2
NF1-208ENST00000471572 LRRC32Q14392 662 aa7.52□□□□□ -1.2
NF1-208ENST00000471572 NKG7Q16617 165 aa7.52□□□□□ -1.2
NF1-208ENST00000471572 PLA2G4EQ3MJ16 856 aa7.52□□□□□ -1.2
NF1-208ENST00000471572 PPM1JQ5JR12 505 aa7.52□□□□□ -1.2
NF1-208ENST00000471572 IFIT1BQ5T764 474 aaKnown RBP7.52□□□□□ -1.2
NF1-208ENST00000471572 L1TD1Q5T7N2 865 aaKnown RBP7.52□□□□□ -1.2
NF1-208ENST00000471572 TXNDC11Q6PKC3 985 aa7.52□□□□□ -1.2
NF1-208ENST00000471572 MMS22LQ6ZRQ5 1243 aa7.52□□□□□ -1.2
NF1-208ENST00000471572 RIPOR1Q6ZS17 1223 aa7.52□□□□□ -1.2
NF1-208ENST00000471572 USP53Q70EK8 1073 aa7.52□□□□□ -1.2
NF1-208ENST00000471572 DDX53Q86TM3 631 aaKnown RBP7.52□□□□□ -1.2
NF1-208ENST00000471572 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.52□□□□□ -1.2
NF1-208ENST00000471572 ENOX1Q8TC92 643 aaKnown RBP7.52□□□□□ -1.2
NF1-208ENST00000471572 CORO1BQ9BR76 489 aa7.52□□□□□ -1.2
NF1-208ENST00000471572 UBE2OQ9C0C9 1292 aaKnown RBP7.52□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms