RNA–Protein interactions for RNA: ENST00000471344.1

COL1A1-203, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 1,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-203ENST00000471344 CYP39A1Q9NYL5 469 aa18.07■□□□□ 0.48
COL1A1-203ENST00000471344 SNHG28P0DPA3 235 aa18.06■□□□□ 0.48
COL1A1-203ENST00000471344 PCP11498 1178 aaKnown RBP18.06■□□□□ 0.48
COL1A1-203ENST00000471344 CCSAPQ6IQ19 270 aaPredicted RBP18.06■□□□□ 0.48
COL1A1-203ENST00000471344 KLHDC9Q8NEP7 349 aa18.06■□□□□ 0.48
COL1A1-203ENST00000471344 ABHD16BQ9H3Z7 469 aa18.06■□□□□ 0.48
COL1A1-203ENST00000471344 TRIM43BA6NCK2 446 aa18.05■□□□□ 0.48
COL1A1-203ENST00000471344 ACLYP53396 1101 aa18.05■□□□□ 0.48
COL1A1-203ENST00000471344 TLE2Q04725 743 aa18.05■□□□□ 0.48
COL1A1-203ENST00000471344 KCNA10Q16322 511 aa18.05■□□□□ 0.48
COL1A1-203ENST00000471344 TMEM63BQ5T3F8 832 aa18.05■□□□□ 0.48
COL1A1-203ENST00000471344 TRIM43Q96BQ3 446 aaPredicted RBP18.05■□□□□ 0.48
COL1A1-203ENST00000471344 TTC14Q96N46 770 aa18.05■□□□□ 0.48
COL1A1-203ENST00000471344 CTAGE5O15320 804 aa18.04■□□□□ 0.48
COL1A1-203ENST00000471344 DUSP11O75319 330 aaKnown RBP18.04■□□□□ 0.48
COL1A1-203ENST00000471344 C6orf222P0C671 652 aaPredicted RBP18.04■□□□□ 0.48
COL1A1-203ENST00000471344 ITGB8P26012 769 aa18.04■□□□□ 0.48
COL1A1-203ENST00000471344 SLC30A10Q6XR72 485 aa18.04■□□□□ 0.48
COL1A1-203ENST00000471344 EEPD1Q7L9B9 569 aa18.04■□□□□ 0.48
COL1A1-203ENST00000471344 FBXO16Q8IX29 292 aaPredicted RBP18.04■□□□□ 0.48
COL1A1-203ENST00000471344 ENAHQ8N8S7 591 aaPredicted RBP18.04■□□□□ 0.48
COL1A1-203ENST00000471344 CLEC4DQ8WXI8 215 aa18.04■□□□□ 0.48
COL1A1-203ENST00000471344 PDGFCQ9NRA1 345 aa18.04■□□□□ 0.48
COL1A1-203ENST00000471344 ZSWIM5Q9P217 1185 aa18.04■□□□□ 0.48
COL1A1-203ENST00000471344 TAF6LQ9Y6J9 622 aa18.04■□□□□ 0.48
COL1A1-203ENST00000471344 PQBP1O60828 265 aaKnown RBP18.03■□□□□ 0.48
COL1A1-203ENST00000471344 BEX3Q00994 111 aa18.03■□□□□ 0.48
COL1A1-203ENST00000471344 PTH1RQ03431 593 aa18.03■□□□□ 0.48
COL1A1-203ENST00000471344 BAATQ14032 418 aaPredicted RBP18.03■□□□□ 0.48
COL1A1-203ENST00000471344 IMMTQ16891 758 aaKnown RBP18.03■□□□□ 0.48
COL1A1-203ENST00000471344 C1orf53Q5VUE5 145 aa18.03■□□□□ 0.48
COL1A1-203ENST00000471344 PNMA1Q8ND90 353 aa18.03■□□□□ 0.48
COL1A1-203ENST00000471344 BADQ92934 168 aa18.03■□□□□ 0.48
COL1A1-203ENST00000471344 ZSCAN10Q96SZ4 725 aaPredicted RBP18.03■□□□□ 0.48
COL1A1-203ENST00000471344 LBHD1Q9BQE6 289 aaPredicted RBP18.03■□□□□ 0.48
COL1A1-203ENST00000471344 UBA5Q9GZZ9 404 aa18.03■□□□□ 0.48
COL1A1-203ENST00000471344 UPF3AQ9H1J1 476 aaKnown RBP18.03■□□□□ 0.48
COL1A1-203ENST00000471344 PRKAG2Q9UGJ0 569 aa18.03■□□□□ 0.48
COL1A1-203ENST00000471344 TNKSO95271 1327 aa18.02■□□□□ 0.48
COL1A1-203ENST00000471344 CHMLP26374 656 aa18.02■□□□□ 0.48
COL1A1-203ENST00000471344 GJA9P57773 515 aa18.02■□□□□ 0.48
COL1A1-203ENST00000471344 LRIT3Q3SXY7 679 aa18.02■□□□□ 0.48
COL1A1-203ENST00000471344 Q7L0L9 218 aa18.02■□□□□ 0.48
COL1A1-203ENST00000471344 DGKHQ86XP1 1220 aa18.02■□□□□ 0.48
COL1A1-203ENST00000471344 TSEN34Q9BSV6 310 aaKnown RBP18.02■□□□□ 0.48
COL1A1-203ENST00000471344 STARD7Q9NQZ5 370 aa18.02■□□□□ 0.48
COL1A1-203ENST00000471344 PTPDC1A2A3K4 754 aa18.01■□□□□ 0.47
COL1A1-203ENST00000471344 ASB14A6NK59 587 aa18.01■□□□□ 0.47
COL1A1-203ENST00000471344 ASGR1P07306 291 aa18.01■□□□□ 0.47
COL1A1-203ENST00000471344 CST5P28325 142 aaPredicted RBP18.01■□□□□ 0.47
COL1A1-203ENST00000471344 TNFAIP2Q03169 654 aa18.01■□□□□ 0.47
COL1A1-203ENST00000471344 C9orf50Q5SZB4 431 aa18.01■□□□□ 0.47
COL1A1-203ENST00000471344 TAPT1Q6NXT6 567 aa18.01■□□□□ 0.47
COL1A1-203ENST00000471344 CYB5R4Q7L1T6 521 aa18.01■□□□□ 0.47
COL1A1-203ENST00000471344 SKAP1Q86WV1 359 aa18.01■□□□□ 0.47
COL1A1-203ENST00000471344 IQCA1Q86XH1 822 aa18.01■□□□□ 0.47
COL1A1-203ENST00000471344 KAT14Q9H8E8 782 aa18.01■□□□□ 0.47
COL1A1-203ENST00000471344 MOXD2PA6NHM9 499 aa18■□□□□ 0.47
COL1A1-203ENST00000471344 CLTBP09497 229 aa18■□□□□ 0.47
COL1A1-203ENST00000471344 SMPD1P17405 629 aa18■□□□□ 0.47
COL1A1-203ENST00000471344 CALML3P27482 149 aa18■□□□□ 0.47
COL1A1-203ENST00000471344 ALDH5A1P51649 535 aaPredicted RBP18■□□□□ 0.47
COL1A1-203ENST00000471344 USH1GQ495M9 461 aa18■□□□□ 0.47
COL1A1-203ENST00000471344 NOL8Q76FK4 1167 aaKnown RBP18■□□□□ 0.47
COL1A1-203ENST00000471344 ANKS1AQ92625 1134 aa18■□□□□ 0.47
COL1A1-203ENST00000471344 CTNNA3Q9UI47 895 aa18■□□□□ 0.47
COL1A1-203ENST00000471344 GNEQ9Y223 722 aaKnown RBP18■□□□□ 0.47
COL1A1-203ENST00000471344 RAD50Q92878 1312 aa17.99■□□□□ 0.47
COL1A1-203ENST00000471344 FAAP100Q0VG06 881 aa17.99■□□□□ 0.47
COL1A1-203ENST00000471344 CDC37Q16543 378 aaPredicted RBP17.99■□□□□ 0.47
COL1A1-203ENST00000471344 GNASQ5JWF2 1037 aa17.99■□□□□ 0.47
COL1A1-203ENST00000471344 GPATCH4Q5T3I0 446 aaKnown RBP17.99■□□□□ 0.47
COL1A1-203ENST00000471344 TLK2Q86UE8 772 aa17.99■□□□□ 0.47
COL1A1-203ENST00000471344 MORC4Q8TE76 937 aa17.99■□□□□ 0.47
COL1A1-203ENST00000471344 NUP133Q8WUM0 1156 aa17.99■□□□□ 0.47
COL1A1-203ENST00000471344 WDR19Q8NEZ3 1342 aa17.98■□□□□ 0.47
COL1A1-203ENST00000471344 CYP21A2P08686 494 aa17.98■□□□□ 0.47
COL1A1-203ENST00000471344 EPHB4P54760 987 aa17.98■□□□□ 0.47
COL1A1-203ENST00000471344 SEC23AQ15436 765 aa17.98■□□□□ 0.47
COL1A1-203ENST00000471344 SHHQ15465 462 aa17.98■□□□□ 0.47
COL1A1-203ENST00000471344 ANKRD33Q7Z3H0 272 aa17.98■□□□□ 0.47
COL1A1-203ENST00000471344 ADGRF4Q8IZF3 695 aa17.98■□□□□ 0.47
COL1A1-203ENST00000471344 STAG2Q8N3U4 1231 aa17.98■□□□□ 0.47
COL1A1-203ENST00000471344 KRT23Q9C075 422 aa17.98■□□□□ 0.47
COL1A1-203ENST00000471344 SENP2Q9HC62 589 aa17.98■□□□□ 0.47
COL1A1-203ENST00000471344 CDH23Q9H251 3354 aa17.97■□□□□ 0.47
COL1A1-203ENST00000471344 EYSQ5T1H1 3165 aa17.97■□□□□ 0.47
COL1A1-203ENST00000471344 KIAA0355O15063 1070 aa17.97■□□□□ 0.47
COL1A1-203ENST00000471344 SGSM2O43147 1006 aa17.97■□□□□ 0.47
COL1A1-203ENST00000471344 RPS6P62753 249 aaKnown RBP17.97■□□□□ 0.47
COL1A1-203ENST00000471344 CXCL17Q6UXB2 119 aa17.97■□□□□ 0.47
COL1A1-203ENST00000471344 RNF207Q6ZRF8 634 aa17.97■□□□□ 0.47
COL1A1-203ENST00000471344 STOX1Q6ZVD7 989 aa17.97■□□□□ 0.47
COL1A1-203ENST00000471344 PCSK9Q8NBP7 692 aaKnown RBP17.97■□□□□ 0.47
COL1A1-203ENST00000471344 TBC1D5Q92609 795 aa17.97■□□□□ 0.47
COL1A1-203ENST00000471344 GLT1D1Q96MS3 346 aa17.97■□□□□ 0.47
COL1A1-203ENST00000471344 UBAC1Q9BSL1 405 aa17.97■□□□□ 0.47
COL1A1-203ENST00000471344 CNNM2Q9H8M5 875 aa17.97■□□□□ 0.47
COL1A1-203ENST00000471344 SPC25Q9HBM1 224 aa17.97■□□□□ 0.47
COL1A1-203ENST00000471344 TMEM39AQ9NV64 488 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms