RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 LRRC47Q8N1G4 583 aaKnown RBP20.02■□□□□ 0.79
HSPG2-208ENST00000471322 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.02■□□□□ 0.79
HSPG2-208ENST00000471322 CEP131Q9UPN4 1083 aa20.02■□□□□ 0.79
HSPG2-208ENST00000471322 TMX2Q9Y320 296 aa20.02■□□□□ 0.79
HSPG2-208ENST00000471322 hCG_1642624A0A1W2PR95 340 aa20.01■□□□□ 0.79
HSPG2-208ENST00000471322 IRX3P78415 501 aaPredicted RBP20.01■□□□□ 0.79
HSPG2-208ENST00000471322 GALNT17Q6IS24 598 aa20.01■□□□□ 0.79
HSPG2-208ENST00000471322 SAMD1Q6SPF0 538 aaPredicted RBP20.01■□□□□ 0.79
HSPG2-208ENST00000471322 MRPS27Q92552 414 aaKnown RBP20.01■□□□□ 0.79
HSPG2-208ENST00000471322 CLSTN2Q9H4D0 955 aa20.01■□□□□ 0.79
HSPG2-208ENST00000471322 RPAP3Q9H6T3 665 aaPredicted RBP20.01■□□□□ 0.79
HSPG2-208ENST00000471322 CTAGE5O15320 804 aa20■□□□□ 0.79
HSPG2-208ENST00000471322 FKTNO75072 461 aa20■□□□□ 0.79
HSPG2-208ENST00000471322 NLRP5P59047 1200 aa20■□□□□ 0.79
HSPG2-208ENST00000471322 CAP1Q01518 475 aa20■□□□□ 0.79
HSPG2-208ENST00000471322 FAM160A1Q05DH4 1040 aa20■□□□□ 0.79
HSPG2-208ENST00000471322 CCDC148Q8NFR7 591 aa20■□□□□ 0.79
HSPG2-208ENST00000471322 P2RX7Q99572 595 aaKnown RBP20■□□□□ 0.79
HSPG2-208ENST00000471322 NOL7Q9UMY1 257 aaKnown RBP20■□□□□ 0.79
HSPG2-208ENST00000471322 SLC45A1Q9Y2W3 748 aa20■□□□□ 0.79
HSPG2-208ENST00000471322 GREB1LQ9C091 1923 aaPredicted RBP19.99■□□□□ 0.79
HSPG2-208ENST00000471322 MYH15Q9Y2K3 1946 aa19.99■□□□□ 0.79
HSPG2-208ENST00000471322 NR1I2O75469 434 aa19.99■□□□□ 0.79
HSPG2-208ENST00000471322 SNHG28P0DPA3 235 aa19.99■□□□□ 0.79
HSPG2-208ENST00000471322 OSBPP22059 807 aa19.99■□□□□ 0.79
HSPG2-208ENST00000471322 SP3Q02447 781 aa19.99■□□□□ 0.79
HSPG2-208ENST00000471322 PABPC4Q13310 644 aaKnown RBP eCLIP19.99■□□□□ 0.79
HSPG2-208ENST00000471322 PTPAQ15257 358 aa19.99■□□□□ 0.79
HSPG2-208ENST00000471322 C17orf99Q6UX52 265 aa19.99■□□□□ 0.79
HSPG2-208ENST00000471322 ANKRD13CQ8N6S4 541 aa19.99■□□□□ 0.79
HSPG2-208ENST00000471322 FSIP1Q8NA03 581 aa19.99■□□□□ 0.79
HSPG2-208ENST00000471322 CD99L2Q8TCZ2 262 aa19.99■□□□□ 0.79
HSPG2-208ENST00000471322 C12orf42Q96LP6 360 aa19.99■□□□□ 0.79
HSPG2-208ENST00000471322 TANGO6Q9C0B7 1094 aa19.99■□□□□ 0.79
HSPG2-208ENST00000471322 TNMDQ9H2S6 317 aa19.99■□□□□ 0.79
HSPG2-208ENST00000471322 SH2D4AQ9H788 454 aa19.99■□□□□ 0.79
HSPG2-208ENST00000471322 VCPKMTQ9H867 229 aa19.99■□□□□ 0.79
HSPG2-208ENST00000471322 PNMA3Q9UL41 463 aa19.99■□□□□ 0.79
HSPG2-208ENST00000471322 MTMR7Q9Y216 660 aa19.99■□□□□ 0.79
HSPG2-208ENST00000471322 MORC2Q9Y6X9 1032 aaPredicted RBP19.99■□□□□ 0.79
HSPG2-208ENST00000471322 ADGRA2Q96PE1 1338 aa19.99■□□□□ 0.79
HSPG2-208ENST00000471322 BMP15O95972 392 aa19.98■□□□□ 0.79
HSPG2-208ENST00000471322 PDHBP11177 359 aa19.98■□□□□ 0.79
HSPG2-208ENST00000471322 CMA1P23946 247 aa19.98■□□□□ 0.79
HSPG2-208ENST00000471322 NR5A1Q13285 461 aa19.98■□□□□ 0.79
HSPG2-208ENST00000471322 OXER1Q8TDS5 423 aa19.98■□□□□ 0.79
HSPG2-208ENST00000471322 CCDC12Q8WUD4 166 aaPredicted RBP19.98■□□□□ 0.79
HSPG2-208ENST00000471322 MKL1Q969V6 931 aa19.98■□□□□ 0.79
HSPG2-208ENST00000471322 RRP36Q96EU6 259 aaKnown RBP19.98■□□□□ 0.79
HSPG2-208ENST00000471322 NUP88Q99567 741 aaPredicted RBP19.98■□□□□ 0.79
HSPG2-208ENST00000471322 NYAP2Q9P242 653 aa19.98■□□□□ 0.79
HSPG2-208ENST00000471322 KINO60870 393 aaKnown RBP19.98■□□□□ 0.79
HSPG2-208ENST00000471322 HOXA7P31268 230 aaPredicted RBP19.98■□□□□ 0.79
HSPG2-208ENST00000471322 ANP32BQ92688 251 aaKnown RBP19.98■□□□□ 0.79
HSPG2-208ENST00000471322 SHISA4Q96DD7 197 aa19.98■□□□□ 0.79
HSPG2-208ENST00000471322 ARHGAP39Q9C0H5 1083 aa19.98■□□□□ 0.79
HSPG2-208ENST00000471322 SEC63Q9UGP8 760 aaKnown RBP19.98■□□□□ 0.79
HSPG2-208ENST00000471322 USP17L15C9J2P7 530 aa19.97■□□□□ 0.79
HSPG2-208ENST00000471322 USP17L13C9JLJ4 530 aa19.97■□□□□ 0.79
HSPG2-208ENST00000471322 USP17L11C9JVI0 530 aa19.97■□□□□ 0.79
HSPG2-208ENST00000471322 USP17L18D6R9N7 530 aa19.97■□□□□ 0.79
HSPG2-208ENST00000471322 USP17L22D6RA61 530 aa19.97■□□□□ 0.79
HSPG2-208ENST00000471322 USP17L17D6RBQ6 530 aa19.97■□□□□ 0.79
HSPG2-208ENST00000471322 USP17L19D6RCP7 530 aa19.97■□□□□ 0.79
HSPG2-208ENST00000471322 USP17L20D6RJB6 530 aa19.97■□□□□ 0.79
HSPG2-208ENST00000471322 CYTH3O43739 400 aa19.97■□□□□ 0.79
HSPG2-208ENST00000471322 TRAPPC10P48553 1259 aa19.97■□□□□ 0.79
HSPG2-208ENST00000471322 TOB1P50616 345 aaPredicted RBP19.97■□□□□ 0.79
HSPG2-208ENST00000471322 USP17L24Q0WX57 530 aa19.97■□□□□ 0.79
HSPG2-208ENST00000471322 GPATCH4Q5T3I0 446 aaKnown RBP19.97■□□□□ 0.79
HSPG2-208ENST00000471322 CATSPERGQ6ZRH7 1159 aa19.97■□□□□ 0.79
HSPG2-208ENST00000471322 RBM43Q6ZSC3 357 aaKnown RBP19.97■□□□□ 0.79
HSPG2-208ENST00000471322 ENGASEQ8NFI3 743 aa19.97■□□□□ 0.79
HSPG2-208ENST00000471322 RBSNQ9H1K0 784 aa19.97■□□□□ 0.79
HSPG2-208ENST00000471322 GOPCQ9HD26 462 aa19.97■□□□□ 0.79
HSPG2-208ENST00000471322 BARHL2Q9NY43 387 aa19.97■□□□□ 0.79
HSPG2-208ENST00000471322 F5H6K3 240 aa19.96■□□□□ 0.79
HSPG2-208ENST00000471322 hCG_1984214I3L0E3 225 aa19.96■□□□□ 0.79
HSPG2-208ENST00000471322 CUTAO60888 179 aa19.96■□□□□ 0.79
HSPG2-208ENST00000471322 GOLGA8HP0CJ92 632 aa19.96■□□□□ 0.79
HSPG2-208ENST00000471322 CCDC192P0DO97 292 aa19.96■□□□□ 0.79
HSPG2-208ENST00000471322 HERVK_113P62684 666 aa19.96■□□□□ 0.79
HSPG2-208ENST00000471322 KLRC3Q07444 240 aa19.96■□□□□ 0.79
HSPG2-208ENST00000471322 FAM83BQ5T0W9 1011 aa19.96■□□□□ 0.79
HSPG2-208ENST00000471322 AXDND1Q5T1B0 1012 aaPredicted RBP19.96■□□□□ 0.79
HSPG2-208ENST00000471322 RASGRP2Q7LDG7 609 aa19.96■□□□□ 0.79
HSPG2-208ENST00000471322 ZNF713Q8N859 430 aaPredicted RBP19.96■□□□□ 0.79
HSPG2-208ENST00000471322 RIOX1Q9H6W3 641 aa19.96■□□□□ 0.79
HSPG2-208ENST00000471322 PCDHA4Q9UN74 947 aa19.96■□□□□ 0.79
HSPG2-208ENST00000471322 NDUFB10O96000 172 aa19.95■□□□□ 0.78
HSPG2-208ENST00000471322 BCRP11274 1271 aa19.95■□□□□ 0.78
HSPG2-208ENST00000471322 SNW1Q13573 536 aaKnown RBP19.95■□□□□ 0.78
HSPG2-208ENST00000471322 NPY5RQ15761 445 aa19.95■□□□□ 0.78
HSPG2-208ENST00000471322 NOM1Q5C9Z4 860 aaKnown RBP19.95■□□□□ 0.78
HSPG2-208ENST00000471322 POTEEQ6S8J3 1075 aa19.95■□□□□ 0.78
HSPG2-208ENST00000471322 KRI1Q8N9T8 703 aaKnown RBP19.95■□□□□ 0.78
HSPG2-208ENST00000471322 DAGLBQ8NCG7 672 aa19.95■□□□□ 0.78
HSPG2-208ENST00000471322 PIBF1Q8WXW3 757 aa19.95■□□□□ 0.78
HSPG2-208ENST00000471322 LPAR1Q92633 364 aa19.95■□□□□ 0.78
HSPG2-208ENST00000471322 TNFRSF25Q93038 417 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms