RNA–Protein interactions for RNA: ENST00000471297.1

SMNDC1-204, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 823 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-204ENST00000471297 ME3Q16798 604 aa7.15□□□□□ -1.26
SMNDC1-204ENST00000471297 SBK1Q52WX2 424 aa7.15□□□□□ -1.26
SMNDC1-204ENST00000471297 CCDC93Q567U6 631 aa7.15□□□□□ -1.26
SMNDC1-204ENST00000471297 NOM1Q5C9Z4 860 aaKnown RBP7.15□□□□□ -1.26
SMNDC1-204ENST00000471297 MFSD14BQ5SR56 506 aa7.15□□□□□ -1.26
SMNDC1-204ENST00000471297 AKNAD1Q5T1N1 836 aa7.15□□□□□ -1.26
SMNDC1-204ENST00000471297 MFSD6Q6ZSS7 791 aa7.15□□□□□ -1.26
SMNDC1-204ENST00000471297 NOL8Q76FK4 1167 aaKnown RBP7.15□□□□□ -1.26
SMNDC1-204ENST00000471297 ADGRA1Q86SQ6 560 aa7.15□□□□□ -1.26
SMNDC1-204ENST00000471297 ZNF384Q8TF68 577 aa7.15□□□□□ -1.26
SMNDC1-204ENST00000471297 STAG1Q8WVM7 1258 aa7.15□□□□□ -1.26
SMNDC1-204ENST00000471297 ZNF274Q96GC6 653 aaPredicted RBP7.15□□□□□ -1.26
SMNDC1-204ENST00000471297 TMEM87BQ96K49 555 aa7.15□□□□□ -1.26
SMNDC1-204ENST00000471297 MRIQ9BWK5 157 aa7.15□□□□□ -1.26
SMNDC1-204ENST00000471297 PDGFDQ9GZP0 370 aaPredicted RBP7.15□□□□□ -1.26
SMNDC1-204ENST00000471297 EGFL7Q9UHF1 273 aa7.15□□□□□ -1.26
SMNDC1-204ENST00000471297 ANAPC4Q9UJX5 808 aa7.15□□□□□ -1.26
SMNDC1-204ENST00000471297 TPCN1Q9ULQ1 816 aa7.15□□□□□ -1.26
SMNDC1-204ENST00000471297 KCNH4Q9UQ05 1017 aa7.15□□□□□ -1.26
SMNDC1-204ENST00000471297 TAF6LQ9Y6J9 622 aa7.15□□□□□ -1.26
SMNDC1-204ENST00000471297 DUOX1Q9NRD9 1551 aa7.15□□□□□ -1.27
SMNDC1-204ENST00000471297 MROH7-TTC4A0A0A0MT08 1334 aa7.14□□□□□ -1.27
SMNDC1-204ENST00000471297 GPR75-ASB3A0A0A6YYF3 556 aa7.14□□□□□ -1.27
SMNDC1-204ENST00000471297 A0A0G2JLW4 131 aa7.14□□□□□ -1.27
SMNDC1-204ENST00000471297 FAM13AO94988 1023 aa7.14□□□□□ -1.27
SMNDC1-204ENST00000471297 SLC3A2P08195 630 aaKnown RBP7.14□□□□□ -1.27
SMNDC1-204ENST00000471297 DPEP1P16444 411 aa7.14□□□□□ -1.27
SMNDC1-204ENST00000471297 NPR3P17342 541 aa7.14□□□□□ -1.27
SMNDC1-204ENST00000471297 CD33P20138 364 aa7.14□□□□□ -1.27
SMNDC1-204ENST00000471297 KCNA3P22001 575 aa7.14□□□□□ -1.27
SMNDC1-204ENST00000471297 MPSTP25325 297 aa7.14□□□□□ -1.27
SMNDC1-204ENST00000471297 USP5P45974 858 aa7.14□□□□□ -1.27
SMNDC1-204ENST00000471297 ARSDP51689 593 aa7.14□□□□□ -1.27
SMNDC1-204ENST00000471297 EVCP57679 992 aa7.14□□□□□ -1.27
SMNDC1-204ENST00000471297 KRT76Q01546 638 aa7.14□□□□□ -1.27
SMNDC1-204ENST00000471297 PPARAQ07869 468 aa7.14□□□□□ -1.27
SMNDC1-204ENST00000471297 SLC51AQ86UW1 340 aa7.14□□□□□ -1.27
SMNDC1-204ENST00000471297 MB21D2Q8IYB1 491 aaPredicted RBP7.14□□□□□ -1.27
SMNDC1-204ENST00000471297 PSMD1Q99460 953 aa7.14□□□□□ -1.27
SMNDC1-204ENST00000471297 ANP32EQ9BTT0 268 aa7.14□□□□□ -1.27
SMNDC1-204ENST00000471297 EPB41L4AQ9HCS5 686 aaPredicted RBP7.14□□□□□ -1.27
SMNDC1-204ENST00000471297 AATFQ9NY61 560 aaKnown RBP eCLIP7.14□□□□□ -1.27
SMNDC1-204ENST00000471297 PIM2Q9P1W9 311 aa7.14□□□□□ -1.27
SMNDC1-204ENST00000471297 ARPP21Q9UBL0 812 aaPredicted RBP7.14□□□□□ -1.27
SMNDC1-204ENST00000471297 SMC3Q9UQE7 1217 aa7.14□□□□□ -1.27
SMNDC1-204ENST00000471297 IVNS1ABPQ9Y6Y0 642 aa7.14□□□□□ -1.27
SMNDC1-204ENST00000471297 LTBP1Q14766 1721 aa7.13□□□□□ -1.27
SMNDC1-204ENST00000471297 GAKO14976 1311 aa7.13□□□□□ -1.27
SMNDC1-204ENST00000471297 C2CD2LO14523 706 aa7.13□□□□□ -1.27
SMNDC1-204ENST00000471297 PRC1O43663 620 aa7.13□□□□□ -1.27
SMNDC1-204ENST00000471297 PFKFB2O60825 505 aa7.13□□□□□ -1.27
SMNDC1-204ENST00000471297 ZBTB7AO95365 584 aa7.13□□□□□ -1.27
SMNDC1-204ENST00000471297 FGRP09769 529 aa7.13□□□□□ -1.27
SMNDC1-204ENST00000471297 PTMSP20962 102 aa7.13□□□□□ -1.27
SMNDC1-204ENST00000471297 HDLBPQ00341 1268 aaKnown RBP7.13□□□□□ -1.27
SMNDC1-204ENST00000471297 KIAA2012Q0VF49 1180 aa7.13□□□□□ -1.27
SMNDC1-204ENST00000471297 GRIN2CQ14957 1233 aa7.13□□□□□ -1.27
SMNDC1-204ENST00000471297 NFKBIBQ15653 356 aa7.13□□□□□ -1.27
SMNDC1-204ENST00000471297 STRIP1Q5VSL9 837 aa7.13□□□□□ -1.27
SMNDC1-204ENST00000471297 CTR9Q6PD62 1173 aa7.13□□□□□ -1.27
SMNDC1-204ENST00000471297 OLFM4Q6UX06 510 aa7.13□□□□□ -1.27
SMNDC1-204ENST00000471297 TBC1D10CQ8IV04 446 aa7.13□□□□□ -1.27
SMNDC1-204ENST00000471297 CCDC83Q8IWF9 413 aa7.13□□□□□ -1.27
SMNDC1-204ENST00000471297 AMOTL1Q8IY63 956 aa7.13□□□□□ -1.27
SMNDC1-204ENST00000471297 CMTR1Q8N1G2 835 aaKnown RBP7.13□□□□□ -1.27
SMNDC1-204ENST00000471297 TMTC2Q8N394 836 aa7.13□□□□□ -1.27
SMNDC1-204ENST00000471297 SDR42E1Q8WUS8 393 aa7.13□□□□□ -1.27
SMNDC1-204ENST00000471297 BRF1Q92994 677 aa7.13□□□□□ -1.27
SMNDC1-204ENST00000471297 TCEANC2Q96MN5 208 aa7.13□□□□□ -1.27
SMNDC1-204ENST00000471297 GBP4Q96PP9 640 aa7.13□□□□□ -1.27
SMNDC1-204ENST00000471297 LLPHQ9BRT6 129 aaKnown RBP7.13□□□□□ -1.27
SMNDC1-204ENST00000471297 DCP1AQ9NPI6 582 aaPredicted RBP7.13□□□□□ -1.27
SMNDC1-204ENST00000471297 JAG2Q9Y219 1238 aa7.13□□□□□ -1.27
SMNDC1-204ENST00000471297 USP20Q9Y2K6 914 aa7.13□□□□□ -1.27
SMNDC1-204ENST00000471297 CD2APQ9Y5K6 639 aa7.13□□□□□ -1.27
SMNDC1-204ENST00000471297 CACNA1SQ13698 1873 aa7.13□□□□□ -1.27
SMNDC1-204ENST00000471297 MINDY4BA8MYZ0 360 aa7.12□□□□□ -1.27
SMNDC1-204ENST00000471297 B4E1Z4 1266 aa7.12□□□□□ -1.27
SMNDC1-204ENST00000471297 DHX16O60231 1041 aaKnown RBP7.12□□□□□ -1.27
SMNDC1-204ENST00000471297 ECE2O60344 883 aa7.12□□□□□ -1.27
SMNDC1-204ENST00000471297 BMP4P12644 408 aa7.12□□□□□ -1.27
SMNDC1-204ENST00000471297 EPB42P16452 691 aa7.12□□□□□ -1.27
SMNDC1-204ENST00000471297 PDCP20941 246 aa7.12□□□□□ -1.27
SMNDC1-204ENST00000471297 LIFRP42702 1097 aa7.12□□□□□ -1.27
SMNDC1-204ENST00000471297 BTDP43251 543 aa7.12□□□□□ -1.27
SMNDC1-204ENST00000471297 EIF1AXP47813 144 aaKnown RBP7.12□□□□□ -1.27
SMNDC1-204ENST00000471297 PDE4BQ07343 736 aa7.12□□□□□ -1.27
SMNDC1-204ENST00000471297 SART3Q15020 963 aaKnown RBP7.12□□□□□ -1.27
SMNDC1-204ENST00000471297 R3HDM1Q15032 1099 aaKnown RBP7.12□□□□□ -1.27
SMNDC1-204ENST00000471297 ECM1Q16610 540 aa7.12□□□□□ -1.27
SMNDC1-204ENST00000471297 DALRD3Q5D0E6 543 aaKnown RBP7.12□□□□□ -1.27
SMNDC1-204ENST00000471297 ALKBH2Q6NS38 261 aa7.12□□□□□ -1.27
SMNDC1-204ENST00000471297 HHIPL2Q6UWX4 724 aa7.12□□□□□ -1.27
SMNDC1-204ENST00000471297 CLEC17AQ6ZS10 378 aa7.12□□□□□ -1.27
SMNDC1-204ENST00000471297 ATCAYQ86WG3 371 aa7.12□□□□□ -1.27
SMNDC1-204ENST00000471297 GLYCTKQ8IVS8 523 aa7.12□□□□□ -1.27
SMNDC1-204ENST00000471297 RGL4Q8IZJ4 473 aa7.12□□□□□ -1.27
SMNDC1-204ENST00000471297 PIK3R5Q8WYR1 880 aa7.12□□□□□ -1.27
SMNDC1-204ENST00000471297 ESR2Q92731 530 aa7.12□□□□□ -1.27
SMNDC1-204ENST00000471297 TNPO1Q92973 898 aaKnown RBP7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms