RNA–Protein interactions for RNA: ENST00000471188.5

VPS50-210, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,254 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-210ENST00000471188 TET3O43151 1660 aa4.68□□□□□ -1.66
VPS50-210ENST00000471188 ZFYVE9O95405 1425 aa4.68□□□□□ -1.66
VPS50-210ENST00000471188 GCOM1H8Y6P7 765 aaPredicted RBP4.68□□□□□ -1.66
VPS50-210ENST00000471188 STXBP3O00186 592 aa4.68□□□□□ -1.66
VPS50-210ENST00000471188 ALDH1L1O75891 902 aa4.68□□□□□ -1.66
VPS50-210ENST00000471188 RNF8O76064 485 aa4.68□□□□□ -1.66
VPS50-210ENST00000471188 MYZAPP0CAP1 466 aa4.68□□□□□ -1.66
VPS50-210ENST00000471188 ZNF18P17022 549 aa4.68□□□□□ -1.66
VPS50-210ENST00000471188 PDIA3P30101 505 aaKnown RBP4.68□□□□□ -1.66
VPS50-210ENST00000471188 ZC3H6P61129 1189 aaKnown RBP4.68□□□□□ -1.66
VPS50-210ENST00000471188 GUCY2DQ02846 1103 aa4.68□□□□□ -1.66
VPS50-210ENST00000471188 SLC39A14Q15043 492 aa4.68□□□□□ -1.66
VPS50-210ENST00000471188 TTC39AQ5SRH9 613 aa4.68□□□□□ -1.66
VPS50-210ENST00000471188 ACBD5Q5T8D3 534 aaPredicted RBP4.68□□□□□ -1.66
VPS50-210ENST00000471188 HDGFL1Q5TGJ6 251 aa4.68□□□□□ -1.66
VPS50-210ENST00000471188 SMYD4Q8IYR2 804 aaPredicted RBP4.68□□□□□ -1.66
VPS50-210ENST00000471188 FBXO41Q8TF61 875 aa4.68□□□□□ -1.66
VPS50-210ENST00000471188 CCDC51Q96ER9 411 aa4.68□□□□□ -1.66
VPS50-210ENST00000471188 PCMTD1Q96MG8 357 aaPredicted RBP4.68□□□□□ -1.66
VPS50-210ENST00000471188 CTAGE1Q96RT6 745 aa4.68□□□□□ -1.66
VPS50-210ENST00000471188 EYA1Q99502 592 aa4.68□□□□□ -1.66
VPS50-210ENST00000471188 GORASP1Q9BQQ3 440 aa4.68□□□□□ -1.66
VPS50-210ENST00000471188 CDK19Q9BWU1 502 aa4.68□□□□□ -1.66
VPS50-210ENST00000471188 PPP1R12CQ9BZL4 782 aa4.68□□□□□ -1.66
VPS50-210ENST00000471188 PIDD1Q9HB75 910 aa4.68□□□□□ -1.66
VPS50-210ENST00000471188 EPB41L5Q9HCM4 733 aa4.68□□□□□ -1.66
VPS50-210ENST00000471188 TAB2Q9NYJ8 693 aa4.68□□□□□ -1.66
VPS50-210ENST00000471188 STIM2Q9P246 746 aa4.68□□□□□ -1.66
VPS50-210ENST00000471188 SERTAD1Q9UHV2 236 aa4.68□□□□□ -1.66
VPS50-210ENST00000471188 CEP131Q9UPN4 1083 aa4.68□□□□□ -1.66
VPS50-210ENST00000471188 C2CD2Q9Y426 696 aa4.68□□□□□ -1.66
VPS50-210ENST00000471188 MED1Q15648 1581 aaPredicted RBP4.68□□□□□ -1.66
VPS50-210ENST00000471188 USP32Q8NFA0 1604 aa4.68□□□□□ -1.66
VPS50-210ENST00000471188 DPPA5A6NC42 116 aa4.68□□□□□ -1.66
VPS50-210ENST00000471188 ZNF233A6NK53 670 aa4.68□□□□□ -1.66
VPS50-210ENST00000471188 GOLGA8BA8MQT2 603 aa4.68□□□□□ -1.66
VPS50-210ENST00000471188 KIF28PB7ZC32 967 aa4.68□□□□□ -1.66
VPS50-210ENST00000471188 PSMD14O00487 310 aa4.68□□□□□ -1.66
VPS50-210ENST00000471188 ZPR1O75312 459 aa4.68□□□□□ -1.66
VPS50-210ENST00000471188 HMGB1P09429 215 aaKnown RBP4.68□□□□□ -1.66
VPS50-210ENST00000471188 BLMHQ13867 455 aa4.68□□□□□ -1.66
VPS50-210ENST00000471188 CCDC96Q2M329 555 aa4.68□□□□□ -1.66
VPS50-210ENST00000471188 BEND3Q5T5X7 828 aa4.68□□□□□ -1.66
VPS50-210ENST00000471188 EFCAB2Q5VUJ9 269 aa4.68□□□□□ -1.66
VPS50-210ENST00000471188 LMNTD2Q8IXW0 634 aa4.68□□□□□ -1.66
VPS50-210ENST00000471188 SPATA4Q8NEY3 305 aa4.68□□□□□ -1.66
VPS50-210ENST00000471188 PRCCQ92733 491 aaPredicted RBP4.68□□□□□ -1.66
VPS50-210ENST00000471188 RBM41Q96IZ5 413 aaKnown RBP4.68□□□□□ -1.66
VPS50-210ENST00000471188 PUS7Q96PZ0 661 aaKnown RBP4.68□□□□□ -1.66
VPS50-210ENST00000471188 PAGR1Q9BTK6 254 aa4.68□□□□□ -1.66
VPS50-210ENST00000471188 MMADHCQ9H3L0 296 aaPredicted RBP4.68□□□□□ -1.66
VPS50-210ENST00000471188 AATFQ9NY61 560 aaKnown RBP eCLIP4.68□□□□□ -1.66
VPS50-210ENST00000471188 TLR7Q9NYK1 1049 aaKnown RBP4.68□□□□□ -1.66
VPS50-210ENST00000471188 EHD2Q9NZN4 543 aa4.68□□□□□ -1.66
VPS50-210ENST00000471188 GGT7Q9UJ14 662 aa4.68□□□□□ -1.66
VPS50-210ENST00000471188 SYNRGQ9UMZ2 1314 aa4.68□□□□□ -1.66
VPS50-210ENST00000471188 NPHP4O75161 1426 aaPredicted RBP4.67□□□□□ -1.66
VPS50-210ENST00000471188 KIAA1210Q9ULL0 1709 aa4.67□□□□□ -1.66
VPS50-210ENST00000471188 HMGB1P1B2RPK0 211 aaPredicted RBP4.67□□□□□ -1.66
VPS50-210ENST00000471188 CREB3O43889 395 aa4.67□□□□□ -1.66
VPS50-210ENST00000471188 ATP6V1G1O75348 118 aa4.67□□□□□ -1.66
VPS50-210ENST00000471188 TRIM37O94972 964 aa4.67□□□□□ -1.66
VPS50-210ENST00000471188 FMNL1O95466 1100 aaPredicted RBP4.67□□□□□ -1.66
VPS50-210ENST00000471188 CFHP08603 1231 aa4.67□□□□□ -1.66
VPS50-210ENST00000471188 FAM153BP0C7A2 387 aa4.67□□□□□ -1.66
VPS50-210ENST00000471188 FDPSP14324 419 aaKnown RBP4.67□□□□□ -1.66
VPS50-210ENST00000471188 MAGEA8P43361 318 aa4.67□□□□□ -1.66
VPS50-210ENST00000471188 GCLCP48506 637 aaPredicted RBP4.67□□□□□ -1.66
VPS50-210ENST00000471188 CARSP49589 748 aaKnown RBP4.67□□□□□ -1.66
VPS50-210ENST00000471188 RNASE9P60153 205 aaKnown RBP4.67□□□□□ -1.66
VPS50-210ENST00000471188 KRT83P78385 493 aa4.67□□□□□ -1.66
VPS50-210ENST00000471188 CYP27A1Q02318 531 aa4.67□□□□□ -1.66
VPS50-210ENST00000471188 UBXN1Q04323 297 aa4.67□□□□□ -1.66
VPS50-210ENST00000471188 KIF5AQ12840 1032 aa4.67□□□□□ -1.66
VPS50-210ENST00000471188 CCDC57Q2TAC2 916 aa4.67□□□□□ -1.66
VPS50-210ENST00000471188 FAM153CQ494X1 144 aa4.67□□□□□ -1.66
VPS50-210ENST00000471188 ANKRD20A2Q5SQ80 823 aa4.67□□□□□ -1.66
VPS50-210ENST00000471188 ANKRD20A1Q5TYW2 823 aa4.67□□□□□ -1.66
VPS50-210ENST00000471188 ANKRD20A3Q5VUR7 823 aa4.67□□□□□ -1.66
VPS50-210ENST00000471188 METTL3Q86U44 580 aaKnown RBP4.67□□□□□ -1.66
VPS50-210ENST00000471188 LONP2Q86WA8 852 aa4.67□□□□□ -1.66
VPS50-210ENST00000471188 PROSER2Q86WR7 435 aaPredicted RBP4.67□□□□□ -1.66
VPS50-210ENST00000471188 NCAPG2Q86XI2 1143 aa4.67□□□□□ -1.66
VPS50-210ENST00000471188 TRIM42Q8IWZ5 723 aa4.67□□□□□ -1.66
VPS50-210ENST00000471188 IFT20Q8IY31 132 aa4.67□□□□□ -1.66
VPS50-210ENST00000471188 SPICE1Q8N0Z3 855 aa4.67□□□□□ -1.66
VPS50-210ENST00000471188 ARL10Q8N8L6 244 aa4.67□□□□□ -1.66
VPS50-210ENST00000471188 CCDC197Q8NCU1 140 aa4.67□□□□□ -1.66
VPS50-210ENST00000471188 OR2W6PQ8NHA6 318 aa4.67□□□□□ -1.66
VPS50-210ENST00000471188 TBC1D5Q92609 795 aa4.67□□□□□ -1.66
VPS50-210ENST00000471188 EAF2Q96CJ1 260 aaPredicted RBP4.67□□□□□ -1.66
VPS50-210ENST00000471188 NLRP3Q96P20 1036 aa4.67□□□□□ -1.66
VPS50-210ENST00000471188 ZNHIT6Q9NWK9 470 aaKnown RBP4.67□□□□□ -1.66
VPS50-210ENST00000471188 ADD3Q9UEY8 706 aaKnown RBP4.67□□□□□ -1.66
VPS50-210ENST00000471188 FAM153AQ9UHL3 310 aa4.67□□□□□ -1.66
VPS50-210ENST00000471188 GGA2Q9UJY4 613 aa4.67□□□□□ -1.66
VPS50-210ENST00000471188 PLAAQ9Y263 795 aa4.67□□□□□ -1.66
VPS50-210ENST00000471188 GOLGA6L10A0A0M3HER8 536 aa4.67□□□□□ -1.66
VPS50-210ENST00000471188 KLF18A0A0U1RQI7 1052 aa4.67□□□□□ -1.66
VPS50-210ENST00000471188 PI4KAP2A4QPH2 592 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms