RNA–Protein interactions for RNA: ENST00000470907.6

LOXL3-208, Transcript of lysyl oxidase like 3, humanhuman

TSL 2

Gene LOXL3, Length 2,837 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LOXL3-208ENST00000470907 TMEM87BQ96K49 555 aa16.1■□□□□ 0.17
LOXL3-208ENST00000470907 L3MBTL1Q9Y468 752 aa16.1■□□□□ 0.17
LOXL3-208ENST00000470907 RGPD2P0DJD1 1756 aa16.1■□□□□ 0.17
LOXL3-208ENST00000470907 STK36Q9NRP7 1315 aa16.1■□□□□ 0.17
LOXL3-208ENST00000470907 GMNCA6NCL1 334 aa16.1■□□□□ 0.17
LOXL3-208ENST00000470907 NUTM2BA6NNL0 878 aaPredicted RBP16.1■□□□□ 0.17
LOXL3-208ENST00000470907 NUTM2EB1AL46 878 aaPredicted RBP16.1■□□□□ 0.17
LOXL3-208ENST00000470907 BUB1BO60566 1050 aaPredicted RBP16.1■□□□□ 0.17
LOXL3-208ENST00000470907 GCP02774 474 aa16.1■□□□□ 0.17
LOXL3-208ENST00000470907 PAFAH1B1P43034 410 aa16.1■□□□□ 0.17
LOXL3-208ENST00000470907 IRX1P78414 480 aaPredicted RBP16.1■□□□□ 0.17
LOXL3-208ENST00000470907 AMOTQ4VCS5 1084 aa16.1■□□□□ 0.17
LOXL3-208ENST00000470907 HIBCHQ6NVY1 386 aaPredicted RBP16.1■□□□□ 0.17
LOXL3-208ENST00000470907 LRP10Q7Z4F1 713 aa16.1■□□□□ 0.17
LOXL3-208ENST00000470907 PROCA1Q8NCQ7 364 aaPredicted RBP16.1■□□□□ 0.17
LOXL3-208ENST00000470907 NSMCE1Q8WV22 266 aa16.1■□□□□ 0.17
LOXL3-208ENST00000470907 SEC16BQ96JE7 1060 aa16.1■□□□□ 0.17
LOXL3-208ENST00000470907 HYOU1Q9Y4L1 999 aa16.1■□□□□ 0.17
LOXL3-208ENST00000470907 EIF4E1BA6NMX2 242 aaKnown RBP16.09■□□□□ 0.17
LOXL3-208ENST00000470907 PHF20L1A8MW92 1017 aa16.09■□□□□ 0.17
LOXL3-208ENST00000470907 BYSLQ13895 437 aaKnown RBP16.09■□□□□ 0.17
LOXL3-208ENST00000470907 SGMS1Q86VZ5 419 aa16.09■□□□□ 0.17
LOXL3-208ENST00000470907 IFT20Q8IY31 132 aa16.09■□□□□ 0.17
LOXL3-208ENST00000470907 NOC3LQ8WTT2 800 aaKnown RBP16.09■□□□□ 0.17
LOXL3-208ENST00000470907 CASKIN2Q8WXE0 1202 aa16.09■□□□□ 0.17
LOXL3-208ENST00000470907 TRIM47Q96LD4 638 aa16.09■□□□□ 0.17
LOXL3-208ENST00000470907 SH2D4AQ9H788 454 aa16.09■□□□□ 0.17
LOXL3-208ENST00000470907 NOD2Q9HC29 1040 aa16.09■□□□□ 0.17
LOXL3-208ENST00000470907 GPR108Q9NPR9 543 aa16.09■□□□□ 0.17
LOXL3-208ENST00000470907 PPP1R7Q15435 360 aa16.09■□□□□ 0.17
LOXL3-208ENST00000470907 TMC4Q7Z404 712 aa16.09■□□□□ 0.17
LOXL3-208ENST00000470907 BCL9LQ86UU0 1499 aa16.09■□□□□ 0.17
LOXL3-208ENST00000470907 RPN1P04843 607 aaKnown RBP16.09■□□□□ 0.17
LOXL3-208ENST00000470907 GRIK3Q13003 919 aa16.09■□□□□ 0.17
LOXL3-208ENST00000470907 ZNF658Q5TYW1 1059 aaPredicted RBP16.09■□□□□ 0.17
LOXL3-208ENST00000470907 MSL1Q68DK7 614 aa16.09■□□□□ 0.17
LOXL3-208ENST00000470907 PARD3BQ8TEW8 1205 aa16.09■□□□□ 0.17
LOXL3-208ENST00000470907 HVCN1Q96D96 273 aa16.09■□□□□ 0.17
LOXL3-208ENST00000470907 KRT12Q99456 494 aa16.09■□□□□ 0.17
LOXL3-208ENST00000470907 PCDHA13Q9Y5I0 950 aa16.09■□□□□ 0.17
LOXL3-208ENST00000470907 DDX60Q8IY21 1712 aaKnown RBP16.08■□□□□ 0.17
LOXL3-208ENST00000470907 KIF3CO14782 793 aa16.08■□□□□ 0.16
LOXL3-208ENST00000470907 ATP6V1G2O95670 118 aa16.08■□□□□ 0.16
LOXL3-208ENST00000470907 PTGDRQ13258 359 aa16.08■□□□□ 0.16
LOXL3-208ENST00000470907 DRP2Q13474 957 aa16.08■□□□□ 0.16
LOXL3-208ENST00000470907 ODF2Q5BJF6 829 aa16.08■□□□□ 0.16
LOXL3-208ENST00000470907 CRACR2BQ8N4Y2 399 aaPredicted RBP16.08■□□□□ 0.16
LOXL3-208ENST00000470907 TCP11Q8WWU5 503 aa16.08■□□□□ 0.16
LOXL3-208ENST00000470907 RSRC1Q96IZ7 334 aaKnown RBP16.08■□□□□ 0.16
LOXL3-208ENST00000470907 TTYH3Q9C0H2 523 aa16.08■□□□□ 0.16
LOXL3-208ENST00000470907 PDS5AQ29RF7 1337 aaKnown RBP16.08■□□□□ 0.16
LOXL3-208ENST00000470907 DEXIO95424 95 aa16.08■□□□□ 0.16
LOXL3-208ENST00000470907 CALRP27797 417 aaKnown RBP16.08■□□□□ 0.16
LOXL3-208ENST00000470907 SLC8A1P32418 973 aa16.08■□□□□ 0.16
LOXL3-208ENST00000470907 HSPA2P54652 639 aa16.08■□□□□ 0.16
LOXL3-208ENST00000470907 ELF3P78545 371 aaPredicted RBP16.08■□□□□ 0.16
LOXL3-208ENST00000470907 PAK2Q13177 524 aa16.08■□□□□ 0.16
LOXL3-208ENST00000470907 KCNB1Q14721 858 aa16.08■□□□□ 0.16
LOXL3-208ENST00000470907 ZNF662Q6ZS27 426 aa16.08■□□□□ 0.16
LOXL3-208ENST00000470907 C2CD5Q86YS7 1000 aa16.08■□□□□ 0.16
LOXL3-208ENST00000470907 CCDC50Q8IVM0 306 aa16.08■□□□□ 0.16
LOXL3-208ENST00000470907 LMBR1Q8WVP7 490 aa16.08■□□□□ 0.16
LOXL3-208ENST00000470907 CALR3Q96L12 384 aaKnown RBP16.08■□□□□ 0.16
LOXL3-208ENST00000470907 PLIN2Q99541 437 aa16.08■□□□□ 0.16
LOXL3-208ENST00000470907 CNOT8Q9UFF9 292 aaKnown RBP16.08■□□□□ 0.16
LOXL3-208ENST00000470907 DCDC2CA8MYV0 355 aa16.07■□□□□ 0.16
LOXL3-208ENST00000470907 HMGB1P1B2RPK0 211 aaPredicted RBP16.07■□□□□ 0.16
LOXL3-208ENST00000470907 USO1O60763 962 aaKnown RBP16.07■□□□□ 0.16
LOXL3-208ENST00000470907 TCP1P17987 556 aaKnown RBP16.07■□□□□ 0.16
LOXL3-208ENST00000470907 PDXDC2PQ6P474 469 aa16.07■□□□□ 0.16
LOXL3-208ENST00000470907 KRT28Q7Z3Y7 464 aa16.07■□□□□ 0.16
LOXL3-208ENST00000470907 ZBTB10Q96DT7 871 aa16.07■□□□□ 0.16
LOXL3-208ENST00000470907 TUBGCP2Q9BSJ2 902 aa16.07■□□□□ 0.16
LOXL3-208ENST00000470907 GDF3Q9NR23 364 aa16.07■□□□□ 0.16
LOXL3-208ENST00000470907 PACSIN2Q9UNF0 486 aaPredicted RBP16.07■□□□□ 0.16
LOXL3-208ENST00000470907 A0A1W2PQC6 194 aa16.07■□□□□ 0.16
LOXL3-208ENST00000470907 H7C1D1 291 aa16.07■□□□□ 0.16
LOXL3-208ENST00000470907 AP1G2O75843 785 aa16.07■□□□□ 0.16
LOXL3-208ENST00000470907 CLTAP09496 248 aa16.07■□□□□ 0.16
LOXL3-208ENST00000470907 MCAMP43121 646 aa16.07■□□□□ 0.16
LOXL3-208ENST00000470907 HLTFQ14527 1009 aaKnown RBP eCLIP16.07■□□□□ 0.16
LOXL3-208ENST00000470907 ZNF572Q7Z3I7 529 aaPredicted RBP16.07■□□□□ 0.16
LOXL3-208ENST00000470907 PNMA8AQ86V59 439 aaPredicted RBP16.07■□□□□ 0.16
LOXL3-208ENST00000470907 CACNA2D3Q8IZS8 1091 aa16.07■□□□□ 0.16
LOXL3-208ENST00000470907 ARMC2Q8NEN0 867 aa16.07■□□□□ 0.16
LOXL3-208ENST00000470907 TLR10Q9BXR5 811 aa16.07■□□□□ 0.16
LOXL3-208ENST00000470907 EXOC1Q9NV70 894 aa16.07■□□□□ 0.16
LOXL3-208ENST00000470907 MAGEC2Q9UBF1 373 aaPredicted RBP16.07■□□□□ 0.16
LOXL3-208ENST00000470907 TBC1D2BQ9UPU7 963 aa16.07■□□□□ 0.16
LOXL3-208ENST00000470907 GOLGA6L10A6NI86 522 aa16.06■□□□□ 0.16
LOXL3-208ENST00000470907 TRAPPC3O43617 180 aa16.06■□□□□ 0.16
LOXL3-208ENST00000470907 UPP2O95045 317 aa16.06■□□□□ 0.16
LOXL3-208ENST00000470907 ZKSCAN8Q15776 578 aaPredicted RBP16.06■□□□□ 0.16
LOXL3-208ENST00000470907 CCDC170Q8IYT3 715 aa16.06■□□□□ 0.16
LOXL3-208ENST00000470907 NUP58Q9BVL2 599 aa16.06■□□□□ 0.16
LOXL3-208ENST00000470907 TMBIM4Q9HC24 238 aa16.06■□□□□ 0.16
LOXL3-208ENST00000470907 ARHGAP20Q9P2F6 1191 aa16.06■□□□□ 0.16
LOXL3-208ENST00000470907 AFDNP55196 1824 aaKnown RBP16.06■□□□□ 0.16
LOXL3-208ENST00000470907 EPHB6O15197 1021 aa16.06■□□□□ 0.16
LOXL3-208ENST00000470907 GTPBP6O43824 516 aaPredicted RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms